BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,928,442	G→T	Q388K (CAG→AAG)	viaA ←	protein ViaA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,928,442	0	G	T	100.0%	491.5 / NA	138	Q388K (CAG→AAG)	viaA	protein ViaA
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (82/56); total (82/56)

Only 100 of 143 total aligned reads displayed.

CTCGTCACGTCGTCAGGCAACCGCTGAGCGATAAAATCAGAAATCACCACCGCATCGGCATCAAACCATTCCCTGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTGCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACG  >  NC_000913/3928306‑3928579

cTCGTCACGTCGTCAGGCAACCGCTGAGCGATAAAATCAGAAATCACCACCGCATCGGCATCAAACCATTCCCTGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAActtctg                                                                                                                                        >  1:1950688/1‑140 (MQ=255)

        gtcgtcAGGCAACCGCTGAGCGATAAAATCAGAAATCACCACCGCATCGGCATCAAACCATTCCCTGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTaaaa                                                                                                                                >  1:1502101/1‑140 (MQ=255)

        gtcgtcAGGCAACCGCTGAGCGATAAAATCAGAAATCACCACCGCATCGGCATCAAACCATTCCCTGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTaaaa                                                                                                                                >  2:401782/1‑140 (MQ=255)

         tcgtcAGGCAACCGCTGAGCGATAAAATCAGAAATCACCACCGCATCGGCATCAAACCATTCCCTGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTaaaaa                                                                                                                               <  2:1502101/140‑1 (MQ=255)

              aGGCAACCGCTGAGCGATAAAATCAGAAATCACCACCGCATCGGCATCAAACCATTCCCTGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGa                                                                                                                          >  1:928394/1‑140 (MQ=255)

                    ccGCTGAGCGATAAAATCAGAAATCACCACCGCATCGGCATCAAACCATTCCCTGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCtt                                                                                                                    >  1:1740938/1‑140 (MQ=255)

                     cGCTGAGCGATAAAATCAGAAATCACCACCGCATCGGCATCAAACCATTCCCTGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTg                                                                                                                   >  1:933566/1‑140 (MQ=255)

                      gCTGAGCGATAAAATCAGAAATCACCACCGCATCGGCATCAAACCATTCCCTGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGt                                                                                                                  >  1:17771/1‑140 (MQ=255)

                        tGAGCGATAAAATCAGAAATCACCACCGCATCGGCATCAAACCATTCCCTGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCATGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTc                                                                                                                <  2:488733/140‑1 (MQ=255)

                           gCGATAAAATCAGAAATCACCACCGCATCGGCATCAAACCATTCCCTGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGAt                                                                                                             <  1:742301/140‑1 (MQ=255)

                           gCGATAAAATCAGAAATCACCACCGCATCGGCATCAAACCATTCCCTGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGAt                                                                                                             <  1:1187156/140‑1 (MQ=255)

                            cGATAAAATCAGAAATCACCACCGCATCGGCATCAAACCATTCCCTGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATg                                                                                                            <  2:1950688/140‑1 (MQ=255)

                            cGATAAAATCAGAAATCACCACCGCATCGGCATCAAACCATTCCCTGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATg                                                                                                            <  2:638291/140‑1 (MQ=255)

                              aTAAAATCAGAAATCACCACCGCATCGGCATCAAACCATTCCCTGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGcc                                                                                                          >  1:1745770/1‑140 (MQ=255)

                               tAAAATCAGAAATCACCACCGCATCGGCATCAAACCATTCCCTGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCt                                                                                                         >  1:1927775/1‑140 (MQ=255)

                                   aTCAGAAATCACCACCGCATCGGCATCAAACCATTCCCTGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTtgtg                                                                                                     <  2:1927775/140‑1 (MQ=255)

                                       gAAATCACCACCGCATCGGCATCAAACCATTCCCTGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGcc                                                                                                 >  2:368421/1‑140 (MQ=255)

                                         aaTCACCACCGCATCGGCATCAAACCATTCCCTGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTg                                                                                               >  1:1999082/1‑140 (MQ=255)

                                          aTCACCACCGCATCGGCATCAAACCATTCCCTGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGa                                                                                              <  1:1226071/140‑1 (MQ=255)

                                               caccGCATCGGCATCAAACCATTCCCTGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCt                                                                                         >  1:1111798/1‑140 (MQ=255)

                                               caccGCATCGGCATCAAACCATTCCCTGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCt                                                                                         <  2:17771/140‑1 (MQ=255)

                                                  cGCATCGGCATCAAACCATTCCCTGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCAt                                                                                      >  1:443284/1‑140 (MQ=255)

                                                    cATCGGCATCAAACCATTCCCTGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATaa                                                                                    <  2:1111798/140‑1 (MQ=255)

                                                    cATCGGCATCAAACCATTCCCTGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATaa                                                                                    <  1:401782/140‑1 (MQ=255)

                                                    cATCGGCATCAAACCATTCCCTGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATaa                                                                                    >  2:242464/1‑140 (MQ=255)

                                                    cATCGGCATCAAACCATTCCCTGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATaa                                                                                    >  1:994899/1‑140 (MQ=255)

                                                      tCGGCATCAAACCATTCCCTGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACg                                                                                  >  2:1509056/1‑140 (MQ=255)

                                                      tCGGCATCAAACCATTCCCTGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACg                                                                                  >  2:1759058/1‑140 (MQ=255)

                                                         gCATCAAACCATTCCCTGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGAc                                                                               >  2:1950345/1‑140 (MQ=255)

                                                         gCATCAAACCATTCCCTGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGAc                                                                               <  1:1587836/140‑1 (MQ=255)

                                                            tCAAACCATTCCCTGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGAt                                                                            >  2:23141/1‑140 (MQ=255)

                                                            tCAAACCATTCCCTGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGAt                                                                            >  2:1561824/1‑140 (MQ=255)

                                                            tCAAACCATTCCCTGCCTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGAt                                                                            <  2:323061/140‑1 (MQ=255)

                                                             cAAACCATTCCCTGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAg                                                                                           >  1:1000411/1‑124 (MQ=255)

                                                               aaCCATTCCCTGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGAtctc                                                                         >  1:1857887/1‑140 (MQ=255)

                                                                   aTTCCCTGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTg                                                                     <  2:198034/140‑1 (MQ=255)

                                                                    ttCCCTGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTgg                                                                    >  2:1743028/1‑140 (MQ=255)

                                                                        cTGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGaaaa                                                                >  1:1016929/1‑140 (MQ=255)

                                                                        cTGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGaaaa                                                                >  2:41458/1‑140 (MQ=255)

                                                                        cTGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGaaaa                                                                <  2:763997/140‑1 (MQ=255)

                                                                        cTGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGaaaa                                                                <  2:533752/140‑1 (MQ=255)

                                                                        cTGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGaaaa                                                                <  1:1906300/140‑1 (MQ=255)

                                                                         tGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGAtct                                                                          >  1:1032907/1‑129 (MQ=255)

                                                                         tGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGAtct                                                                          >  2:289288/1‑129 (MQ=255)

                                                                         tGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGAtct                                                                          <  1:289288/129‑1 (MQ=255)

                                                                         tGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGaaaa                                                                >  1:655285/1‑139 (MQ=255)

                                                                         tGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGaaaa                                                                <  2:655285/139‑1 (MQ=255)

                                                                           cTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAg                                                             <  2:90516/140‑1 (MQ=255)

                                                                           cTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAg                                                             >  2:2100409/1‑140 (MQ=255)

                                                                           cTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAg                                                             <  2:933566/140‑1 (MQ=255)

                                                                           cTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAg                                                             <  2:489356/140‑1 (MQ=255)

                                                                           cTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAg                                                             <  1:23141/140‑1 (MQ=255)

                                                                           cTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAg                                                             >  1:646260/1‑140 (MQ=255)

                                                                             ttGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCa                                                           <  2:443284/140‑1 (MQ=255)

                                                                             ttGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCa                                                           <  2:1740938/140‑1 (MQ=255)

                                                                              tGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGaa                                                                  >  1:662565/1‑132 (MQ=255)

                                                                              tGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGaa                                                                  <  2:662565/132‑1 (MQ=255)

                                                                                      ttCCATAATGGCGCGAAAACAACTGGCAAGATCGGTACCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATagc                                                  >  2:2108426/1‑140 (MQ=255)

                                                                                        ccATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGaa                                                                  >  2:1205950/1‑122 (MQ=255)

                                                                                            aaTGGCGCGAAAACAACTGGCAGTTTCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGGGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGcc                                            <  2:928394/140‑1 (MQ=255)

                                                                                              tGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCgg                                          >  2:1704167/1‑140 (MQ=255)

                                                                                              tGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCgg                                          >  2:1550125/1‑140 (MQ=255)

                                                                                              tGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCgg                                          >  1:841716/1‑140 (MQ=255)

                                                                                                gcgcGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGtt                                        >  2:1029680/1‑140 (MQ=255)

                                                                                                gcgcGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGtt                                        >  2:1850718/1‑140 (MQ=255)

                                                                                                gcgcGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGtt                                        >  1:825429/1‑140 (MQ=255)

                                                                                                 cgcgAAAACAACTGGCAAGATCGGTGCCGCCACGAGACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGttt                                       >  2:1051070/1‑140 (MQ=255)

                                                                                                 cgcgAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGttt                                       >  2:868893/1‑140 (MQ=255)

                                                                                                 cgcgAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGttt                                       >  1:1854882/1‑140 (MQ=255)

                                                                                                 cgcgAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGttt                                       <  2:400645/140‑1 (MQ=255)

                                                                                                 cgcgAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGttt                                       >  1:2043115/1‑140 (MQ=255)

                                                                                                 cgcgAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGttt                                       >  1:170620/1‑140 (MQ=255)

                                                                                                 cgcgAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGttt                                       >  2:509818/1‑140 (MQ=255)

                                                                                                 cgcgAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGttt                                       >  1:400645/1‑140 (MQ=255)

                                                                                                 cgcgAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGttt                                       >  2:1063911/1‑140 (MQ=255)

                                                                                                 cgcgAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGttt                                       >  2:1566190/1‑140 (MQ=255)

                                                                                                 cgcgAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGttt                                       >  1:688915/1‑140 (MQ=255)

                                                                                                 cgcgAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGttt                                       >  1:1337418/1‑140 (MQ=255)

                                                                                                 cgcgAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGttt                                       >  2:1757079/1‑140 (MQ=255)

                                                                                                      aaaCAACTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGc                                  <  1:1570070/140‑1 (MQ=255)

                                                                                                       aacaacTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCg                                 <  2:1340437/140‑1 (MQ=255)

                                                                                                          aacTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCgaga                              >  2:1159208/1‑140 (MQ=255)

                                                                                                           acTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGagag                             <  1:1725446/140‑1 (MQ=255)

                                                                                                           acTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGagag                             <  1:1029680/140‑1 (MQ=255)

                                                                                                           acTGGCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGagag                             <  2:1016929/140‑1 (MQ=255)

                                                                                                               gCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAAt                         >  2:454191/1‑140 (MQ=255)

                                                                                                               gCAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAAt                         >  2:1670434/1‑140 (MQ=255)

                                                                                                                cAAGATCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATg                        <  1:368421/140‑1 (MQ=255)

                                                                                                                     tCGGTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCAt                   <  1:1159208/140‑1 (MQ=255)

                                                                                                                       ggTGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCa                 <  2:841716/140‑1 (MQ=255)

                                                                                                                         tGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCa                           <  2:304215/128‑1 (MQ=255)

                                                                                                                         tGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCa                           >  1:304215/1‑128 (MQ=255)

                                                                                                                         tGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAg               >  1:1982278/1‑140 (MQ=255)

                                                                                                                         tGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAg               >  1:1523314/1‑140 (MQ=255)

                                                                                                                         tGCCGCCACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGACTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATg                        <  2:1905448/131‑1 (MQ=255)

                                                                                                                          gccgccACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAgg              <  2:1337418/140‑1 (MQ=255)

                                                                                                                            cgccACGAAACTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGcc            <  2:290422/140‑1 (MQ=255)

                                                                                                                                    aaCTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGaa    <  1:497410/140‑1 (MQ=255)

                                                                                                                                    aaCTTCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGaa    <  2:1854882/140‑1 (MQ=255)

                                                                                                                                      ctgctgGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACg  <  1:1282546/140‑1 (MQ=255)

CTCGTCACGTCGTCAGGCAACCGCTGAGCGATAAAATCAGAAATCACCACCGCATCGGCATCAAACCATTCCCTGCTTTGCAAGCGTTCCATAATGGCGCGAAAACAACTGGCAAGATCGGTGCCGCCACGAAACTGCTGGCTTAAAAAACGGATTGCTTGTTCGATGCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACG  >  NC_000913/3928306‑3928579

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`