BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,423,989	C→A	R70S (CGT→AGT)	trkG →	Rac prophage; K(+) transporter TrkG

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,423,989	0	C	A	100.0%	478.9 / NA	133	R70S (CGT→AGT)	trkG	Rac prophage; K(+) transporter TrkG
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (51/82); total (51/82)

Only 100 of 133 total aligned reads displayed.

TTGCCACCAATGGTTGTAGCATTGTTTTATAAAGAAAAAAGCCTGTTTGTTTTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCCGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCATTCCCTTTATGGATTGACTCAGAACTTAATTTAACGTTCATTGATGCTCTGTTTGAAGGGGTTTCTGGAATAACAACAAC  >  NC_000913/1423854‑1424125

ttGCCACCAATGGTTGTAGCATTGTTTTATAAAGAAAAAAGCCTGTTTGTTTTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGa                                                                                                                                      >  2:601482/1‑140 (MQ=255)

ttGCCACCAATGGTTGTAGCATTGTTTTATAAAGAAAAAAGCCTGTTTGTTTTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGa                                                                                                                                      <  2:1398729/140‑1 (MQ=255)

ttGCCACCAATGGTTGTAGCATTGTTTTATAAAGAAAAAAGCCTGTTTGTTTTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGa                                                                                                                                      >  2:1694266/1‑140 (MQ=255)

ttGCCACCAATGGTTGTAGCATTGTTTTATAAAGAAAAAAGCCTGTTTGTTTTCTTTATAACTTTCGTCATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGa                                                                                                                                      <  2:1734364/140‑1 (MQ=255)

 tGCCACCAATGGTTGTAGCATTGTTTTATAAAGAAAAAAGCCTGTTTGTTTTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGAt                                                                                                                                     <  1:527349/140‑1 (MQ=255)

 tGCCACCAATGGTTGTAGCATTGTTTTATAAAGAAAAAAGCCTGTTTGTTTTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGAt                                                                                                                                     <  1:1408139/140‑1 (MQ=255)

  gCCACCAATGGTTGTAGCATTGTTTTATAAAGAAAAAAGCCTGTTTGTTTTCTTTATAACTTTCGTTATATTTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGAt                                                                                                                                     <  2:775401/140‑1 (MQ=255)

   ccaccaATGGTTGTAGCATTGTTTTATAAAGAAAAAAGCCTGTTTGTTTTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATgg                                                                                                                                   >  2:81526/1‑140 (MQ=255)

      ccaATGGTTGTAGCATTGTTTTATAAAGAAAAAAGCCTGTTTGTTTTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGtt                                                                                                                                <  2:124070/140‑1 (MQ=255)

      ccaATGGTTGTAGCATTGTTTTATAAAGAAAAAAGCCTGTTTGTTTTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGtt                                                                                                                                <  1:1796843/140‑1 (MQ=255)

      ccaATGGTTGTAGCATTGTTTTATAAAGAAAAAAGCCTGTTTGTTTTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGtt                                                                                                                                <  1:1305403/140‑1 (MQ=255)

      ccaATGGTTGTAGCATTGTTTTATAAAGAAAAAAGCCTGTTTGTTTTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGtt                                                                                                                                <  2:2003762/140‑1 (MQ=255)

          tGGTTGTAGCATTGTTTTATAAAGAAAAAAGCCTGTTTGTTTTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTttatt                                                                                                                            >  1:174186/1‑140 (MQ=255)

           ggTTGTAGCATTGTTTTATAAAGAAAAAAGCCTGTTTGTTTTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTttatta                                                                                                                           <  2:1150270/140‑1 (MQ=255)

           ggTTGTAGCATTGTTTTATAAAGAAAAAAGCCTGTTTGTTTTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTttatta                                                                                                                           <  2:1240073/140‑1 (MQ=255)

           ggTTGTAGCATTGTTTTATAAAGAAAAAAGCCTGTTTGTTTTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTttatta                                                                                                                           <  2:1813069/140‑1 (MQ=255)

            gTTGTAGCATTGTTTTATAAAGAAAAAAGCCTGTTTGTTTTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTtattat                                                                                                                          <  2:267578/140‑1 (MQ=255)

            gTTGTAGCATTGTTTTATAAAGAAAAAAGCCTGTTTGTTTTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTtattat                                                                                                                          <  2:1663534/140‑1 (MQ=255)

            gTTGTAGCATTGTTTTATAAAGAAAAAAGCCTGTTTGTTTTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTtattat                                                                                                                          <  1:1213523/140‑1 (MQ=255)

            gTTGTAGCATTGTTTTATAAAGAAAAAAGCCTGTTTGTTTTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTtattat                                                                                                                          <  2:1251724/140‑1 (MQ=255)

                   cATTGTTTTATAAAGAAAAAAGCCTGTTTGTTTTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTa                                                                                                                   <  2:2396/140‑1 (MQ=255)

                   cATTGTTTTATAAAGAAAAAAGCCTGTTTGTTTTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTa                                                                                                                   <  2:2003057/140‑1 (MQ=255)

                   cATTGTTTTATAAAGAAAAAAGCCTGTTTGTTTTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTa                                                                                                                   <  2:1516275/140‑1 (MQ=255)

                     ttGTTTTATAAAGAAAAAAGCTTGTTTGTTTTCTTTATAACTTTCGTTGTA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAAt                                                                                                                 >  1:1510658/1‑140 (MQ=255)

                     ttGTTTTATAAAGAAAAAAGCCTGTTTGTTTTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAAt                                                                                                                 >  2:1175576/1‑140 (MQ=255)

                     ttGTTTTATAAAGAAAAAAGCCTGTTTGTTTTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAAt                                                                                                                 >  2:2131552/1‑140 (MQ=255)

                     ttGTTTTATAAAGAAAAAAGCCTGTTTGTTTTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAAt                                                                                                                 >  2:403569/1‑140 (MQ=255)

                      tGTTTTATAAAGAAAAAAGCCTGTTTGTTTTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATg                                                                                                                >  1:271895/1‑140 (MQ=255)

                       gTTTTATAAAGAAAAAAGCCTGTTTGTTTTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGt                                                                                                               >  1:1467637/1‑140 (MQ=255)

                        ttttATAAAGAAAAAAGCCTGTTTGTTTTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTtattat                                                                                                                          >  1:857833/1‑128 (MQ=255)

                        ttttATAAAGAAAAAAGCCTGTTTGTTTTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGtt                                                                                                              >  1:1362539/1‑140 (MQ=255)

                        ttttATAAAGAAAAAAGCCTGTTTGTTTTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGtt                                                                                                              >  2:1877154/1‑140 (MQ=255)

                        ttttATAAAGAAAAAAGCCTGTTTGTTTTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGtt                                                                                                              >  1:35523/1‑140 (MQ=255)

                           tataAAGAAAAAAGCCTGTTTGTTTTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTg                                                                                                           >  1:1667193/1‑140 (MQ=255)

                             taAAGAAAAAAGCCTGTTTGTTTTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGa                                                                                                         >  2:1528721/1‑140 (MQ=255)

                                  aaaaaaGCCTGTTTGTTTTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTg                                                                                                    >  1:1151456/1‑140 (MQ=255)

                                  aaaaaaGCCTGTTTGTTTTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTg                                                                                                    >  1:1954326/1‑140 (MQ=255)

                                  aaaaaaGCCTGTTTGTTTTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTg                                                                                                    >  2:1782775/1‑140 (MQ=255)

                                  aaaaaaGCCTGTTTGTTTTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTg                                                                                                    >  1:1263029/1‑140 (MQ=255)

                                     aaaGCCTGTTTGTTTTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGttt                                                                                                 <  1:2131552/140‑1 (MQ=255)

                                     aaaGCCTGTTTGTTTTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGttt                                                                                                 <  2:1954326/140‑1 (MQ=255)

                                      aaGCCTGTTTGTTTTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGtttt                                                                                                <  1:299814/140‑1 (MQ=255)

                                      aaGCCTGTTTGTTTTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGtttt                                                                                                <  1:670068/140‑1 (MQ=255)

                                       aGCCTGTTTGTTTTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTc                                                                                               <  1:1528721/140‑1 (MQ=255)

                                       aGCCTGTTTGTTTTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTc                                                                                               <  2:1467689/140‑1 (MQ=255)

                                          cTGTTTGTTTTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGt                                                                                            <  1:672910/140‑1 (MQ=255)

                                            gtttgtttTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGtta                                                                                          <  2:1720172/140‑1 (MQ=255)

                                            gtttgtttTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGtta                                                                                          >  2:1037914/1‑140 (MQ=255)

                                                    tCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCa                                                                                  <  2:271895/140‑1 (MQ=255)

                                                    tCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCa                                                                                  <  1:2015736/140‑1 (MQ=255)

                                                    tCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCa                                                                                  <  2:800139/140‑1 (MQ=255)

                                                    tCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCa                                                                                  <  2:1829379/140‑1 (MQ=255)

                                                     cTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCAt                                                                                 <  2:966839/140‑1 (MQ=255)

                                                     cTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCAt                                                                                 <  2:1151456/140‑1 (MQ=255)

                                                     cTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCAt                                                                                 <  1:119029/140‑1 (MQ=255)

                                                     cTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCAt                                                                                 <  1:1611543/140‑1 (MQ=255)

                                                     cTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCAt                                                                                 <  1:1782775/140‑1 (MQ=255)

                                                      tttATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCAtt                                                                                <  1:1694266/140‑1 (MQ=255)

                                                       ttATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCAt                                                                                 >  1:1723675/1‑138 (MQ=255)

                                                       ttATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCAt                                                                                 <  2:1723675/138‑1 (MQ=255)

                                                                tCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCATTCCCTTTATgg                                                                      >  2:1499967/1‑140 (MQ=255)

                                                                tCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCATTCCCTTTATgg                                                                      >  1:1087561/1‑140 (MQ=255)

                                                                 cGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCATTCCCTTTATGGa                                                                     <  1:1531157/140‑1 (MQ=255)

                                                                       a‑tTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCATTCCCTTTATGGATTGACt                                                               >  1:1572490/1‑140 (MQ=255)

                                                                       a‑tTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCATTCCCTTTATGGATTGACt                                                               <  2:948719/140‑1 (MQ=255)

                                                                       a‑tTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCATTCCCTTTATGGATTGACt                                                               <  2:2156575/140‑1 (MQ=255)

                                                                       a‑tTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCATTCCCTTTATGGATTGACt                                                               <  1:601482/140‑1 (MQ=255)

                                                                       a‑tTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCATTCCCTTTATGGATTGACt                                                               <  1:1037914/140‑1 (MQ=255)

                                                                          ttttttGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCATTCCCTTTATGGATTGACTCa                                                             <  2:2119743/140‑1 (MQ=255)

                                                                                      gtggCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCATTCCCTTTATGGATTGACTCAGAACTTAATTTa                                                 <  1:1100474/140‑1 (MQ=255)

                                                                                      gtggCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCATTCCCTTTATGGATTGACTCAGAACTTAATTTa                                                 >  1:1869702/1‑140 (MQ=255)

                                                                                           ggAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCATTCCCTTTATGGATTGACTCAGAACTTAATTTAACGtt                                            <  2:385784/140‑1 (MQ=255)

                                                                                           ggAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCATTCCCTTTATGGATTGACTCAGAACTTAATTTAACGtt                                            <  2:1510658/140‑1 (MQ=255)

                                                                                                 tGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCATTCCCTTTATGGATTGACTCAGAACTTAATTTAACGTTCATTGa                                      >  1:1176715/1‑140 (MQ=255)

                                                                                                    tataCAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCATTCCCTTTATGGATTGACTCAGAACTTAATTTAACGTTCATTGATGc                                   >  2:95510/1‑140 (MQ=255)

                                                                                                    tataCAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCATTCCCTTTATGGATTGACTCAGAACTTAATTTAACGTTCATTGATGc                                   <  1:1877154/140‑1 (MQ=255)

                                                                                                    tataCAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCATTCCCTTTATGGATTGACTCAGAACTTAATTTAACGTTCATTGATGc                                   <  2:1685835/140‑1 (MQ=255)

                                                                                                    tataCAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCATTCCCTTTATGGATTGACTCAGAACTTAATTTAACGTTCATTGATGc                                   <  2:1401056/140‑1 (MQ=255)

                                                                                                     ataCAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCATTCCCTTTATGGATTGACTCAGAACTTAATTTAACGTTCATTGATGct                                  <  2:1932772/140‑1 (MQ=255)

                                                                                                     ataCAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCATTCCCTTTATGGATTGACTCAGAACTTAATTTAACGTTCATTGATGct                                  <  1:789602/140‑1 (MQ=255)

                                                                                                       aCAACTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCATTCCCTTTATGGATTGGCTCAGAACTTAATTTAACGTTCATTGATGctct                                <  2:1479409/140‑1 (MQ=255)

                                                                                                         aaCTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCATTCCCTTTATGGATTGACTCAGAACTTAATTTAACGTTCATTGATGCTCTGt                              >  1:425201/1‑140 (MQ=255)

                                                                                                           cTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCATTCCCTTTATGGATTGACTCAGAACTTAATTTAACGTTCATTGATGc                                   >  1:2113758/1‑133 (MQ=255)

                                                                                                           cTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCATTCCCTTTATGGATTGACTCAGAACTTAATTTAACGTTCATTGATGCTCTGttt                            >  1:1035944/1‑140 (MQ=255)

                                                                                                           cTAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCATTCCCTTTATGGATTGACTCAGAACTTAATTTAACGTTCATTGATGCTCTGttt                            >  2:1993414/1‑140 (MQ=255)

                                                                                                            tAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCATTCCCTTTATGGATTGACTCAGAACTTAATTTAACGTTCATTGATGCTCTGTTTg                           >  1:42190/1‑140 (MQ=255)

                                                                                                            tAAGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCATTCCCTTTATGGATTGACTCAGAACTTAATTTAACGTTCATTGATGCTCTGTTTg                           >  1:696123/1‑140 (MQ=255)

                                                                                                              aGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCATTCCCTTTATGGATTGACTCAGAACTTAATTTAACGTTCATTGATGctc                                 <  2:671662/132‑1 (MQ=255)

                                                                                                              aGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCATTCCCTTTATGGATTGACTCAGAACTTAATTTAACGTTCATTGATGct                                  >  2:1023140/1‑131 (MQ=255)

                                                                                                              aGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCATTCCCTTTATGGATTGACTCAGAACTTAATTTAACGTTCATTGATGct                                  <  1:1023140/131‑1 (MQ=255)

                                                                                                              aGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCATTCCCTTTATGGATTGACTCAGAACTTAATTTAACGTTCATTGATGCTCTGTTTGaa                         >  1:1190594/1‑140 (MQ=255)

                                                                                                              aGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCATTCCCTTTATGGATTGACTCAGAACTTAATTTAACGTTCATTGATGCTCTGTTTGaa                         <  1:1720112/140‑1 (MQ=255)

                                                                                                              aGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCATTCCCTTTATGGATTGACTCAGAACTTAATTTAACGTTCATTGATGCTCTGTTTGaa                         >  1:803290/1‑140 (MQ=255)

                                                                                                              aGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCATTCCCTTTATGGATTGACTCAGAACTTAATTTAACGTTCATTGATGCTCTGTTTGaa                         >  2:41104/1‑140 (MQ=255)

                                                                                                              aGAAATCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCATTCCCTTTATGGATTGACTCAGAACTTAATTTAACGTTCATTGATGCTCTGTTTGaa                         >  2:764904/1‑140 (MQ=255)

                                                                                                                 aaTCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCATTCCCTTTATGGATTGACTCAGAACTTAATTTAACGTTCATTGATGCTCTGTTTGAAggg                      <  2:1086823/140‑1 (MQ=255)

                                                                                                                  aTCTGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCATTCCCTTTATGGATTGACTCAGAACTTAATTTAACGTTCATTGATGCTCTGTTTGAAgggg                     <  1:41104/140‑1 (MQ=255)

                                                                                                                     tGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCATTCCCTTTATGGATTGACTCAGAACTTAATTTAACGTTCATTGATGCTCTGTTTGAAGGGGttt                  >  1:676452/1‑140 (MQ=255)

                                                                                                                     tGGCATTCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCATTCCCTTTATGGATTGACTCAGAACTTAATTTAACGTTCATTGATGCTCTGTTTGAAGGGGttt                  >  1:100096/1‑140 (MQ=255)

                                                                                                                          ttCAATTACGTACCAGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCATTCCCTTTATGGATTGACTCAGAACTTAATTTAACGTTCATTGATGCTCTGTTTGAAGGGGTTTCTGGa             <  2:1374092/140‑1 (MQ=255)

TTGCCACCAATGGTTGTAGCATTGTTTTATAAAGAAAAAAGCCTGTTTGTTTTCTTTATAACTTTCGTTATA‑TTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCCGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCATTCCCTTTATGGATTGACTCAGAACTTAATTTAACGTTCATTGATGCTCTGTTTGAAGGGGTTTCTGGAATAACAACAAC  >  NC_000913/1423854‑1424125

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`