New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 375160NA (NA)26 (0.640)
+T		 12/274 1.9 NA noncoding (28/34 nt) other REP31e
?NC_000913 = 377491 NA (NA)noncoding (32/34 nt) other REP32d

Only 100 of 263 total aligned reads displayed.

GCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGAC  >  NC_000913/375021‑375299
                                                                                                                                               |                                                                                                                                             
gcgcACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCgg                                                                                                                                               <  2:327620/140‑1 (MQ=38)
  cgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccGTAGGCCTGATAAGACGCG‑TTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGcc                                                                                                                                             >  1:99004‑M1/60‑140 (MQ=255)
    aCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGCAAA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGtct                                                                                                                                            >  1:662872‑M1/1‑137 (MQ=255)
    aCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGtcta                                                                                                                                           >  2:675887‑M1/1‑136 (MQ=255)
    aCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGtcta                                                                                                                                           >  1:509585‑M1/1‑136 (MQ=255)
    aCGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGCAAA‑GCGTCGCATCAGGCAT‑‑GGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGTCTa                                                                                                                                           >  2:481054/1‑140 (MQ=11)
    ACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTa                                                                                                                                           <  1:38999‑M1/140‑1 (MQ=255)
    ACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCCGCCTa                                                                                                                                           <  2:184204‑M1/140‑1 (MQ=255)
     ccgtTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTAAGCGTCGCATCAGGCATTGTGCGC‑CAACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCctc                                                                                                                                           <  2:466609‑M1/136‑2 (MQ=255)
      cgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTAc                                                                                                                                          <  1:539668‑M1/64‑1 (MQ=255)
      cgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGACTAc                                                                                                                                          <  1:602828‑M1/64‑1 (MQ=255)
       gactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACg                                                                                                                                         <  2:620830‑M1/65‑1 (MQ=255)
         TGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGt                                                                                                                                      <  2:543653‑M1/140‑1 (MQ=255)
             cggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGgc                                                                                                                                   >  2:42557‑M1/70‑140 (MQ=255)
             cggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGgc                                                                                                                                   >  1:117400‑M1/70‑140 (MQ=255)
             GGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGgcg                                                                                                                                  >  2:246130‑M1/1‑140 (MQ=255)
             GGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGgcg                                                                                                                                  >  1:462150‑M1/1‑140 (MQ=255)
             GGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGgcg                                                                                                                                  >  2:580693‑M1/1‑140 (MQ=255)
              ggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGgcg                                                                                                                                  >  1:431869‑M1/69‑140 (MQ=255)
              ggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGgcg                                                                                                                                  >  1:437689‑M1/69‑140 (MQ=255)
               ATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTA‑GCGTCGCATCAGGCATC‑TGCGCACCACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGcgcg                                                                                                                                >  1:651845‑M1/1‑140 (MQ=255)
                tGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGCAAA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGtctacacttcgccca                                                                                                                                <  2:662872‑M1/140‑16 (MQ=255)
                gggttatgatcacagctattattttgtctccagttttattggcgagcatattgcctaccacgccaataaactgaatatgcgttgataataGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGgcg                                                                                                                                  >  2:69285‑M1/91‑140 (MQ=255)
                gggttatgatcacagctattattttgtctccagttttattggcgagcatattgcctaccacgccaataaactgaatatgcgttgataataGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGgcg                                                                                                                                  >  1:679102‑M1/91‑140 (MQ=255)
                gggttatgatcacagctattattttgtctccagttttattggcgagcatattgcctaccacgccaataaactgaatatgcgttgataataGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGgcg                                                                                                                                  >  2:150033‑M1/91‑140 (MQ=255)
                gggttatgatcacagctattattttgtctccagttttattggcgagcatattgcctaccacgccaataaactgaatatgcgttgataataGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGgcg                                                                                                                                  >  2:611089‑M1/91‑140 (MQ=255)
                gggttatgatcacagctattattttgtctccagttttattggcgagcatattgcctaccacgccaataaactgaatatgcgttgataataGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGgcg                                                                                                                                  >  2:648122‑M1/91‑140 (MQ=255)
                gggttatgatcacagctattattttgtctccagttttattggcgagcatattgcctaccacgccaataaactgaatatgcgttgataataGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGgcg                                                                                                                                  >  2:615076‑M1/91‑140 (MQ=255)
                 tgcggcgtgaacgccttatccggtctacacttcgcccataaaccGTAGGCCTGATAAGACGCG‑TTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCgag                                                                                                                              <  2:386079‑M1/96‑1 (MQ=255)
                   cggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCgaga                                                                                                                             >  2:233482‑M1/64‑140 (MQ=255)
                   cggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCgaga                                                                                                                             >  1:689726‑M1/64‑140 (MQ=255)
                   cggcgtgaacgcattatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCgaga                                                                                                                             >  2:346999‑M1/64‑140 (MQ=255)
                      cgtgaacgccttatccggcctacacttcgcccgtaagccGTAGGCCTGATAAGACGCG‑TTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAAttt                                                                                                                         <  1:163054‑M1/101‑1 (MQ=255)
                       gtgaacgccttatccggtctacacttcgcccataaaccGTAGGCCTGATAAGACGCG‑TTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTg                                                                                                                        >  2:271876‑M1/39‑140 (MQ=255)
                       gtgaacgccttatccggtctacacttcgcccataaaccGTAGGCCTGATAAGACGCG‑TTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTg                                                                                                                        >  2:433260‑M1/39‑140 (MQ=255)
                       TGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTg                                                                                                                        >  1:583386‑M1/1‑140 (MQ=255)
                         aaCGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGtctacacttcgccca                                                                                                                                <  1:232540‑M1/130‑16 (MQ=255)
                           aacgccttatccggtctacacttgcccctaaaacctaggcctgataagacgcgcaTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAAAGCCCTTATCCGGC‑TACGGGGGGCGCGGGAAATtgtct                                                                                                                     <  2:202803‑M1/85‑3 (MQ=255)
                               TTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTg                                                                                                                <  1:285880‑M1/140‑1 (MQ=255)
                                  atccggtctacacttcgcccataaaccGTAGGCCTGATAAGACGCG‑TTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTg                                                                                                                        >  2:314312‑M1/28‑129 (MQ=255)
                                   ccGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGtctacacttcgcccataaaccgtaggcctgataag                                                                                                            <  1:675887‑M1/140‑36 (MQ=255)
                                    CGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAg                                                                                                           >  2:38999‑M1/1‑140 (MQ=255)
                                    CGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAg                                                                                                           >  2:110918‑M1/1‑140 (MQ=255)
                                    CGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAg                                                                                                           >  2:110028‑M1/1‑140 (MQ=255)
                                     GGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGa                                                                                                          >  1:317818‑M1/1‑140 (MQ=255)
                                      tttgtctccagttttattggcgagcatattgcctaccacgccaataaactgaatatgcgttgataataGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATaa                                                                                                            >  1:629942‑M1/69‑140 (MQ=255)
                                      tttgtctccagttttattggcgagcatattgcctaccacgccaataaactgaatatgcgttgataataGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATaa                                                                                                            >  1:370596‑M1/69‑140 (MQ=255)
                                       gtctacacttcgcccataaaccgtaggcctgataagacgcgcaTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGAc                                                                                                         <  1:359691‑M1/97‑1 (MQ=255)
                                            tccagttttattggcgagcatattgcctaccacgccaataaactgaatatgcgttgataataGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATaa                                                                                                            >  1:491406‑M1/63‑134 (MQ=255)
                                                ggCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TAGCGt                                                                                             <  1:449433/140‑1 (MQ=40)
                                                 gcgcGGGAATTTGTAGGCCTGATAAGACGCG‑TTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATaa                                                                                                            >  2:678706/1‑126 (MQ=255)
                                                 gcgcGGGAATTTGTAGGCCTGATAAGACGCG‑TTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAg                                                                                                           >  1:226843/1‑127 (MQ=40)
                                                 gcgcGGGAATTTGTAGGCCTGATAAGACGCG‑TTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAg                                                                                                           <  2:226843/127‑1 (MQ=255)
                                                 cgcccataaaccgtaggcctgataagacgcgcaTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TAGCGt                                                                                             >  2:586887‑M1/34‑140 (MQ=255)
                                                  gcccataaaccGTAGGCCTGATAAGACGCG‑TTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TAGCGTCg                                                                                           >  1:580487‑M1/12‑140 (MQ=255)
                                                     gggAATTTGTAGGCCTGATAAGACGCG‑TTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGCA‑TAGCGTCGCa                                                                                         >  2:452671/1‑140 (MQ=255)
                                                     gggAATTTGTAGGCCTGATAAGACGCG‑TTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TAGCGTCGCAt                                                                                        >  2:151969/1‑140 (MQ=39)
                                                     gggAATTTGTAGGCCTGATAAGACGCG‑TTA‑GCGTCGCATCAGGCAT‑‑GGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGtctacacttcgcccataaaccgtaggcctgataaga                                                                                                           <  1:150877‑M1/122‑37 (MQ=255)
                                                      gtaagccgtaggcctgataagacgcgcaAA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATaa                                                                                                            <  1:109822‑M1/94‑1 (MQ=255)
                                                      gtaagccgtaggcctgataagacgcgcaAA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATaa                                                                                                            <  1:199832‑M1/94‑1 (MQ=255)
                                                      gtaagccgtaggcctgataagacgcgcaAA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TAGCGTCGCAt                                                                                        <  1:398775‑M1/112‑1 (MQ=255)
                                                      gtaagccGTAGGCCTGATAAGACGCG‑TTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGTGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TAGCGTCGCATc                                                                                       <  1:387796‑M1/133‑1 (MQ=255)
                                                      gtaagccGTAGGCCTGATAAGACGCG‑TTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAg                                                                                                           <  2:653215‑M1/115‑1 (MQ=255)
                                                      gtaagccGTAGGCCTGATAAGACGCG‑TTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAg                                                                                                           >  2:599012‑M1/8‑122 (MQ=255)
                                                      gtaagccGTAGGCCTGATAAGACGCG‑TTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑t‑t                                                                                                  <  1:354175‑M1/122‑1 (MQ=255)
                                                      gtaagccGTAGGCCTGATAAGACGCG‑TTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑t‑t                                                                                                  >  2:354175‑M1/8‑129 (MQ=255)
                                                      gtaagccGTAGGCCTGATAAGACGCG‑TTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TAGCGTCGCATc                                                                                       <  1:607270‑M1/133‑1 (MQ=255)
                                                      gtaagccGTAGGCCTGATAAGACGCG‑TTA‑GCGTCGCATCAGGCATC‑TGCGCACAACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TAGCGTCGCATc                                                                                       <  1:336483‑M1/133‑1 (MQ=255)
                                                      ggAATTTGTAGGCCTGATAAGACGCG‑TTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TAGCGTCGCATc                                                                                       <  2:139902/140‑1 (MQ=38)
                                                      ataaaccgtaggcctgataagacgcgcaTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TAGCGt                                                                                             <  1:306299‑M1/107‑1 (MQ=255)
                                                      ataaaccgtaggcctgataagacgcgcaTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TAGCGt                                                                                             >  2:306299‑M1/29‑135 (MQ=255)
                                                      ataaaccGTAGGCCTGATAAGACGCG‑TTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TAGCGTCGCATc                                                                                       <  1:486006‑M1/133‑1 (MQ=255)
                                                       taagccgtaggcctgataagacgcgcaAA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TAGCGTCGCATc                                                                                       <  2:484040‑M1/113‑1 (MQ=255)
                                                       taagccGTAGGCCTGATAAGACGCG‑TTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TAGCGTCGCATCa                                                                                      <  1:180775‑M1/134‑1 (MQ=255)
                                                       taaaccgtaggcctgataagacgcgcaTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAg                                                                                                           >  2:518751‑M1/28‑122 (MQ=255)
                                                       taaaccgtaggcctgataagacgcgcaTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAg                                                                                                           <  1:518751‑M1/95‑1 (MQ=255)
                                                                GGCCTGATAAGACGCG‑TTA‑GCGTCGCATCAGGCATG‑‑GCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGTCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑CATAGCGTCGCATCAGGCATCTgc                                                                             <  1:560064‑M1/140‑1 (MQ=255)
                                                                                  TA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATgc                                                            >  2:163054‑M1/1‑140 (MQ=255)
                                                                                   A‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATgcg                                                           >  1:41586‑M1/1‑140 (MQ=255)
                                                                                   A‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATgcg                                                           >  2:285880‑M1/1‑140 (MQ=255)
                                                                                       gTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGCA‑AAGCGTCGCATCAGGCAT‑GGCGCACGACTGCCGGATgcggcg                                                        >  1:272933/1‑140 (MQ=11)
                                                                                        TCGCATCAGGCATG‑‑GCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTa                                                      <  1:591867‑M1/140‑1 (MQ=255)
                                                                                        TCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TAGCGTCGCATCAGGCATCTGCGCACg                                                                        <  1:617804‑M1/123‑1 (MQ=255)
                                                                                        TCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGt                                                       <  2:509346‑M1/140‑1 (MQ=255)
                                                                                             tgcgttgataataGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAAc                                                   >  2:492164‑M1/14‑140 (MQ=255)
                                                                                              CAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGc                                                 >  2:571779‑M1/1‑140 (MQ=255)
                                                                                                        gcgcACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGCA‑AAGCGTCGCATCAGGCAT‑GGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCgg                                        <  2:40252/140‑1 (MQ=11)
                                                                                                                  gCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAG‑CGC‑‑A‑AAGCGTCGCATCAGGCAT‑GGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGgcg                           <  1:100420/140‑1 (MQ=11)
                                                                                                                    CGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGgc                            >  2:416451‑M1/1‑140 (MQ=255)
                                                                                                                     GGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGgcg                           >  2:510460‑M1/1‑140 (MQ=255)
                                                                                                                          CGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGa                      >  1:86824‑M1/1‑140 (MQ=255)
                                                                                                                               TGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTg                 >  2:44910‑M1/1‑140 (MQ=255)
                                                                                                                               TGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTg                 >  1:130255‑M1/1‑140 (MQ=255)
                                                                                                                                            ccGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataag     <  1:314303‑M1/140‑51 (MQ=255)
                                                                                                                                            CCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATaa     >  1:659049‑M1/1‑140 (MQ=255)
                                                                                                                                            CCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATaa     >  2:637437‑M1/1‑140 (MQ=255)
                                                                                                                                            CCGGCCTACGGATGGTGCGGGAATTTGTAGGCCTGATAAGACGCG‑C‑AAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATaa     >  2:82344‑M1/1‑140 (MQ=255)
                                                                                                                                             CGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAg    >  1:544516‑M1/1‑140 (MQ=255)
                                                                                                                                              GGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGa   >  1:672292‑M1/1‑140 (MQ=255)
                                                                                                                                              GGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGa   >  1:646551‑M1/1‑140 (MQ=255)
                                                                                                                                               |                                                                                                                                             
GCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTA‑GCGTCGCATCAGGCATC‑TGCGCACGACTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑T‑TAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGAC  >  NC_000913/375021‑375299

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.