New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4373295 =NA (NA)37 (0.970) 12/256 1.7 NA noncoding (2/34 nt) other REP328b
?NC_000913 4374499 = NA (NA)noncoding (1/34 nt) other REP329a

Only 100 of 109 total aligned reads displayed.

AGAAAGGTTAATTATTGGTGTTAGCTATATAAAAAGTAACAACAGCAATGCATATGAATAATTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTAGGCCTGATAAGCGTAGCGAATCAGGCAATTTTAATGTTTAACTTCCCTGTTTAATCA  >  NC_000913/4374361‑4374627
                                                                                                                                          |                                                                                                                                
aatgcttacgcgcgctgcatcacttacgtgttcaatccaccagcaaaactgcaccacaggcgaaataatctcatctttgctaatgcgaggctggagccatccagcctgaaatgactgataacgtgatcgttggtcatgcc                                                                                                                                 >  2:224787‑M2/139‑140 (MQ=255)
aatgcttacgcgcgctgcatcacttacgtgttcaatccaccagcaaaactgcaccacaggcgaaataatctcatctttgctaatgcgaggctggagccatccagcctgaaatgactgataacgtgatcgttggtcatgcc                                                                                                                                 >  2:10889‑M2/139‑140 (MQ=255)
 atgcttacgcgcgctgcatcacttacgtgttcaatccaccagcaaaactgcaccacaggcgaaataatctcatctttgctaatgcgaggctggagccatccagcctgaaatgactgataacgtgatcgttggtcatgCCg                                                                                                                                >  1:324420‑M2/138‑140 (MQ=255)
  tgcttacgcgcgctgcatcacttacgtgttcaatccaccagcaaaactgcaccacaggcgaaataatctcatctttgctaatgcgaggctggagccatccagcctgaaatgactgataacgtgatcgttggtcatgCCgg                                                                                                                               >  2:5574‑M2/137‑140 (MQ=255)
  tgcttacgcgcgctgcatcacttacgtgttcaatccaccagcaaaactgcaccacaggcgaaataatctcatctttgctaatgcgaggctggagccatccagcctgaaatgactgataacgtgatcgttggtcatgCCgg                                                                                                                               >  2:494527‑M2/137‑140 (MQ=255)
  tgcttacgcgcgctgcatcacttacgtgttcaatccaccagcaaaactgcaccacaggcgaaataatctcatctttgctaatgcgaggctggagccatccagcctgaaatgactgataacgtgatcgttggtcatgCCgg                                                                                                                               >  1:667572‑M2/137‑140 (MQ=255)
  tgcttacgcgcgctgcatcacttacgtgttcaatccaccagcaaaactgcaccacaggcgaaataatctcatctttgctaatgcgaggctggagccatccagcctgaaatgactgataacgtgatcgttggtcatgCCgg                                                                                                                               >  2:133994‑M2/137‑140 (MQ=255)
     ttacgcgcgctgcatcacttacgtgttcaatccaccagcaaaactgcaccacaggcgaaataatctcatctttgctaatgcgaggctggagccatccagcctgaaatgactgataacgtgatcgttggtcatgCCGGATg                                                                                                                            >  2:158339‑M2/134‑140 (MQ=255)
        tAATTATTGGTGTTAGCTATATAAAAAGTAACAACAGCAATGCATATGAATAATTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAg                                                                                                                         <  1:245015/140‑1 (MQ=255)
         aaTTATTGGTGTTAGCTATATAAAAAGTAACAACAGCAATGCATATGAATAATTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGc                                                                                                                        >  2:701935/1‑140 (MQ=255)
                    ttAGCTATATAAAAAGTAACAACAGCAATGCATATGAATAATTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCa                                                                                                                          <  2:380100/127‑1 (MQ=255)
                    ttAGCTATATAAAAAGTAACAACAGCAATGCATATGAATAATTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCtt                                                                                                             >  1:338877/1‑140 (MQ=255)
                     tAGCTATATAAAAAGTAACAACAGCAATGCATATGAATAATTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTa                                                                                                            >  1:521436/1‑140 (MQ=255)
                      aGCTATATAAAAAGTAACAACAGCAATGCATATGAATAATTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTAt                                                                                                           >  2:303735/1‑140 (MQ=255)
                      aGCTATATAAAAAGTAACAACAGCAATGCATATGAATAATTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTAt                                                                                                           >  1:348006/1‑140 (MQ=255)
                      aGCTATATAAAAAGTAACAACAGCAATGCATATGAATAATTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTAt                                                                                                           >  1:493884/1‑140 (MQ=255)
                       gCTATATAAAAAGTAACAACAGCAATGCATATGAATAATTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATc                                                                                                          <  1:505792/140‑1 (MQ=255)
                         tatataAAAAGTAACAACAGCAATGCATATGAATAATTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCg                                                                                                        <  1:566085/140‑1 (MQ=255)
                         tatataAAAAGTAACAACAGCAATGCATATGAATAATTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCg                                                                                                        <  2:521436/140‑1 (MQ=255)
                              aaaaaGTAACAACAGCAATGCATATGAATAATTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTa                                                                                                   <  2:666562/140‑1 (MQ=255)
                              aaaaaGTAACAACAGCAATGCATATGAATAATTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTa                                                                                                   <  2:348006/140‑1 (MQ=255)
                                caatccaccagcaaaactgcaccacaggcgaaataatctcatctttgctaatgcgaggctggagccatccagcctgaaatgactgataacatgatcgttggtcatgCCGGATGCAGCGTAAACGCCTTATCCGGCCTACa                                                                                                 >  1:497185‑M2/107‑140 (MQ=255)
                                aaaGTAACAACAGCAATGCATATGAATAATTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACa                                                                                                 <  2:325763/140‑1 (MQ=255)
                                aaaGTAACAACAGCAATGCATATGAATAATTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACa                                                                                                 <  2:61621/140‑1 (MQ=255)
                                 aatccaccagcaaaactgcaccacaggcgaaataatctcatctttgctaatgcgaggctggagccatccagcctgaaatgactgataacgtgatcgttggtcatgCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAg                                                                                                >  2:139289‑M2/106‑140 (MQ=255)
                                   gTAACAACAGCAATGCATATGAATAATTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGtt                                                                                              <  2:613388/140‑1 (MQ=255)
                                     aacgacAGCAATGCATATGAATAATTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCa                                                                                            >  1:238208/1‑140 (MQ=255)
                                     aacaacAGCAATGCATATGAATAATTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCa                                                                                            >  1:610147/1‑140 (MQ=255)
                                     aacaacAGCAATGCATATGAATAATTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCa                                                                                            >  2:348352/1‑140 (MQ=255)
                                     aacaacAGCAATGCATATGAATAATTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCa                                                                                            >  1:95986/1‑140 (MQ=255)
                                        cagcaaaactgcaccacaggcgaaataatctcatctttgctaatgcgaggctggagccatccagcctgaaatgactgataacgtgatcgttggtcatgCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTg                                                                                         <  1:581941‑M2/42‑1 (MQ=255)
                                                tGCATATGAATAATTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCa                                                                                 <  2:338877/140‑1 (MQ=255)
                                                     ccacaggcgaaataatctcatctttgctaatgcgaggctggagccatccagcctgaaatgactgataacgtgatcgttggtcatgCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaa                                                                            >  2:151145‑M2/86‑140 (MQ=255)
                                                     atGAATAATTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaa                                                                            >  2:269714/1‑140 (MQ=255)
                                                     atGAATAATTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaa                                                                            >  2:112856/1‑140 (MQ=255)
                                                         ataatTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttc                                                                        <  1:416968/140‑1 (MQ=255)
                                                          taatTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                       >  2:320704/1‑140 (MQ=255)
                                                          taatTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                       >  1:81889/1‑140 (MQ=255)
                                                          taatTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                       <  2:174876/140‑1 (MQ=255)
                                                          ggcgaaataatctcatctttgctaatgcgaggctggagccatccagcctgaaatgactgataacgtgatcgttggtcatgCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                       <  1:151145‑M2/60‑1 (MQ=255)
                                                          ggcgaaataatctcatctttgctaatgcgaggctggagccatccagcctgaaatgactgataacgtgatcgttggtcatgCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                       <  2:155570‑M2/60‑1 (MQ=255)
                                                          ggcgaaataatctcatctttgctaatgcgaggctggagccatccagcctgaaatgactgataacgtgatcgttggtcatgCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                       <  1:139289‑M2/60‑1 (MQ=255)
                                                          ggcgaaataatctcatctttgctaatgcgaggctggagccatccagcctgaaatgactgataacgtgatcgttggtcatgCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                       <  1:133994‑M2/60‑1 (MQ=255)
                                                          ggcgaaataatctcatctttgctaatgcgaggctggagccatccagcctgaaatgactgataacgtgatcgttggtcatgCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                       <  1:228995‑M2/60‑1 (MQ=255)
                                                          ggcgaaataatctcatctttgctaatgcgaggctggagccatccagcctgaaatgactgataacgtgatcgttggtcatgCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                       <  2:259925‑M2/60‑1 (MQ=255)
                                                          ggcgaaataatctcatctttgctaatgcgaggctggagccatccagcctgaaatgactgataacgtgatcgttggtcatgCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                       <  1:268076‑M2/60‑1 (MQ=255)
                                                          ggcgaaataatctcatctttgctaatgcgaggctggagccatccagcctgaaatgactgataacgtgatcgttggtcatgCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                       <  1:556913‑M2/60‑1 (MQ=255)
                                                          ggcgaaataatctcatctttgctaatgcgaggctggagccatccagcctgaaatgactgataacgtgatcgttggtcatgCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                       <  1:539164‑M2/60‑1 (MQ=255)
                                                          ggcgaaataatctcatctttgctaatgcgaggctggagccatccagcctgaaatgactgataacgtgatcgttggtcatgCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                       <  2:60386‑M2/60‑1 (MQ=255)
                                                          ggcgaaataatctcatctttgctaatgcgaggctggagccatccagcctgaaatgactgataacgtgatcgttggtcatgCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                       >  2:539164‑M2/81‑140 (MQ=255)
                                                          ggcgaaataatctcatctttgctaatgcgaggctggagccatccagcctgaaatgactgataacgtgatcgttggtcatgCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                       <  1:358722‑M2/60‑1 (MQ=255)
                                                          ggcgaaataatctcatctttgctaatgcgaggctggagccatccagcctgaaatgactgataacgtgatcgttggtcatgCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                       <  1:494527‑M2/60‑1 (MQ=255)
                                                          ggcgaaataatctcatctttgctaatgcgaggctggagccatccagcctgaaatgactgataacgtgatcgttggtcatgCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                       <  1:326845‑M2/60‑1 (MQ=255)
                                                          ggcgaaataatctcatctttgctaatgcgaggctggagccatccagcctgaaatgactgataacgtgatcgttggtcatgCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAAACCAttcaatttca                                                                       <  1:224787‑M2/60‑1 (MQ=255)
                                                          ggcgaaataatctcatctttgctaatgcgaggctggagccatccagcctgaaatgactgataacatgatcgttggtcatgCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                       <  2:497185‑M2/60‑1 (MQ=255)
                                                             ttAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATg                                                                    <  2:238208/140‑1 (MQ=255)
                                                               aaaGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCa                                                                  <  1:303735/140‑1 (MQ=255)
                                                               aaaGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCa                                                                  <  2:610147/140‑1 (MQ=255)
                                                               aaaGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCa                                                                  <  2:456911/140‑1 (MQ=255)
                                                                   atctcatctttgctaatgcgaggctggagccatccagcctgaaatgactgataacgtgatcgttggtcatgCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                       >  2:211705‑M2/72‑131 (MQ=255)
                                                                   atctcatctttgctaatgcgaggctggagccatccagcctgaaatgactgataacgtgatcgttggtcatgCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                       <  1:211705‑M2/60‑1 (MQ=255)
                                                                    ttATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATg                                                             <  1:27425/140‑1 (MQ=255)
                                                                      aTGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCa                                                                  <  1:28775/133‑1 (MQ=255)
                                                                      aTGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCa                                                                  >  2:28775/1‑133 (MQ=255)
                                                                       tGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCa                                                                  <  1:420781/132‑1 (MQ=255)
                                                                        gCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTAgg                                                         >  2:509967/1‑140 (MQ=255)
                                                                          ctttgctaatgcgaggctggagccatccagcctgaaatgactgataacgtgatcgttggtcatgCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                       <  2:399289‑M2/60‑1 (MQ=255)
                                                                          ctttgctaatgcgaggctggagccatccagcctgaaatgactgataacgtgatcgttggtcatgCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                       >  1:399289‑M2/65‑124 (MQ=255)
                                                                           tttgctaatgcgaggctggagccatccagcctgaaatgactgataacgtgatcgttggtcatgCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                       <  2:502268‑M2/60‑1 (MQ=255)
                                                                           tttgctaatgcgaggctggagccatccagcctgaaatgactgataacgtgatcgttggtcatgCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                       >  1:8250‑M2/64‑123 (MQ=255)
                                                                           tttgctaatgcgaggctggagccatccagcctgaaatgactgataacgtgatcgttggtcatgCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                       <  2:8250‑M2/60‑1 (MQ=255)
                                                                            cGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCa                                                                  <  1:40474/127‑1 (MQ=255)
                                                                            cGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCa                                                                  >  2:40474/1‑127 (MQ=255)
                                                                             tgctaatgcgaggctggagccatccagcctgaaatgactgataacgtgatcgttggtcatgCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTAGGCCTGa                                                    <  1:459940‑M2/79‑1 (MQ=255)
                                                                             gggCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTAGGCCTGa                                                    >  1:656246/1‑140 (MQ=255)
                                                                             gggCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTAGGCCTGa                                                    >  1:75710/1‑140 (MQ=255)
                                                                              ggCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCa                                                                  >  2:512143/1‑125 (MQ=255)
                                                                              ggCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCa                                                                  <  1:512143/125‑1 (MQ=255)
                                                                              ggCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTa                                                           <  1:483058/132‑1 (MQ=255)
                                                                              ggCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTa                                                           >  2:483058/1‑132 (MQ=255)
                                                                              ggCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTAGGCCTGAt                                                   >  1:531873/1‑140 (MQ=255)
                                                                              ggCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTAGGCCTGAt                                                   <  1:112856/140‑1 (MQ=255)
                                                                              ggCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTAGGCCTGAt                                                   >  1:74546/1‑140 (MQ=255)
                                                                              ggCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTAGGCCTGAt                                                   <  1:701935/140‑1 (MQ=255)
                                                                                               gccatccagcctgaaatgactgataacgtgatcgttggtcatgCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTAGGCCTGATAAGCGTAGCGAATCAgg                                  <  1:365590‑M2/97‑1 (MQ=255)
                                                                                               ccAGTTTAATGACAGGTTGCTGTTCTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTAGGCCTGATAAGCGTAGCGAATCAgg                                  >  1:585752/1‑140 (MQ=255)
                                                                                                      aaTGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTAGGCCTGATAAGCGTAGCGAATCAGGCAAtttt                           >  1:253157/1‑140 (MQ=255)
                                                                                                       gcctgaaatgactgataacgtgatcgttggtcatgCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTAGGCCTGATAAGCGTAGCGAATCAgg                                  >  2:485069‑M2/36‑132 (MQ=255)
                                                                                                       gcctgaaatgactgataacgtgatcgttggtcatgCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTAGGCCTGATAAGCGTAGCGAATCAgg                                  <  1:485069‑M2/97‑1 (MQ=255)
                                                                                                       gcctgaaatgactgataacgtgatcgttggtcatgCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTAGGCCTGATAAGCGTAGCGAATCAgg                                  <  2:415213‑M2/97‑1 (MQ=255)
                                                                                                       gcctgaaatgactgataacgtgatcgttggtcatgCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTAGGCCTGATAAGCGTAGCGAATCAgg                                  >  1:415213‑M2/36‑132 (MQ=255)
                                                                                                       gcctgaaatgactgataacgtgatcgttggtcatgCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTAGGCCTGATAAGCGTAGCGAATCAGGCAATTTTa                          >  2:565225‑M2/36‑140 (MQ=255)
                                                                                                            aGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTAGGCCTGATAAGCGTAGCGAATCAGGCAATTTTAATGtt                     <  2:656246/140‑1 (MQ=255)
                                                                                                             ggTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGGTGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTAGGCCTGATAAGCGTAGCGAATCAGGCAATTTTAATGttt                    >  2:158203/1‑140 (MQ=255)
                                                                                                                   tGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTAGGCCTGATAAGCGTAGCGAATCAGGCAATTTTAATGTTTAACTTc              <  2:585752/140‑1 (MQ=255)
                                                                                                                   tGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTAGGCCTGATAAGCGTAGCGAATCAGGCAATTTTAATGTTTAACTTc              <  1:320704/140‑1 (MQ=255)
                                                                                                                   tGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTAGGCCTGATAAGCGTAGCGAATCAGGCAATTTTAATGTTTAACTTc              <  2:493884/140‑1 (MQ=255)
                                                                                                                   tGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTAGGCCTGATAAGCGTAGCGAATCAGGCAATTTTAATGTTTAACTTc              <  2:253157/140‑1 (MQ=255)
                                                                                                                    gTACTTGCGTTTGTTGCTCTTGCCGGGTGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTAGGCCTGATAAGCGTAGCGAATCAGGCAATTTTAATGTTTAACTTcc             <  1:158203/140‑1 (MQ=255)
                                                                                                                               tgttgCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTAGGCCTGATAAGCGTAGCGAATCAGGCAATTTTAATGTTTAACTTCCCTGTTTAATCa  >  1:118549/1‑140 (MQ=255)
                                                                                                                                          |                                                                                                                                
AGAAAGGTTAATTATTGGTGTTAGCTATATAAAAAGTAACAACAGCAATGCATATGAATAATTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTAGGCCTGATAAGCGTAGCGAATCAGGCAATTTTAATGTTTAACTTCCCTGTTTAATCA  >  NC_000913/4374361‑4374627

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.