Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	753,125	0	T	A	24.6%	146.3 / 19.6	65	intergenic (‑330/+60)	ybgD/gltA	putative fimbrial protein YbgD/citrate synthase
Reads supporting (aligned to +/- strand):  ref base T (39/10);  new base A (0/16);  total (39/26)
Fisher's exact test for biased strand distribution p-value = 8.20e-09
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

GGGTTATAAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTT‑GTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTC  >  NC_000913/752986‑753257                                                                                                                                             |                                                                                                                                     gggTTATAAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTT‑GTGTTTAGGCatat                                                                                                                                      <  1:616645/140‑1 (MQ=255) gggTTATAAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTT‑GTGTTTAGGCatat                                                                                                                                      <  1:1137530/140‑1 (MQ=255)    ttATAAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTT‑GTGTTTAGGCATATaaa                                                                                                                                   >  2:1484944/1‑140 (MQ=255)            gcgcttACAATGAATTTTTTAATTGAAATTTTTGGTTGGTTAATAATTTGAGCTTTTTTTTTTTTTTTAAATATCTATATAGGTCTTTTAATGGATTTTTTTTTTAAATTTTTTT‑GTGTTTAGGCATAAAAAAACCAccc                                                                                                                           <  2:698900/135‑1 (MQ=255)            gCGACTACCATGAATTTTTTATTTAAAAGTATTGGGTTGCTGATAATTTGAGTTGTTCTTTTTTTTTTAAATATTTATATAGGTTTTTTAATGGTTTTTATTTTTAAATTTTTTT‑GTGTTTAGGAATAAAAAAATCAAcc                                                                                                                           <  2:824612/140‑1 (MQ=255)            gCGACTACCATGAAGTTTTTAATTGAAAGTATTGTGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTT‑GTGTTTAGGCATATAAAAATCAAcc                                                                                                                           >  1:507759/1‑140 (MQ=255)            gCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTT‑GTGTTTAGGCATATAAAAATCAAcc                                                                                                                           >  2:1460056/1‑140 (MQ=255)            gCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTT‑GTGTTTAGGCATATAAAAATCAAcc                                                                                                                           >  1:698900/1‑140 (MQ=255)            gCGACTACCATGAAGTTTTTAATTAAAAGTATTGGGTTGCTGATAATTTGAGCTTTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTT‑GTGTTTAGGCATATAAAAATCAAcc                                                                                                                           <  1:176379/140‑1 (MQ=255)             cGACTACCATGAAGTTTTTAATAAAAAGTATGGGGTTGCTGATAATTTGAGTTTTTCTTTTTTTTTTAAATATATATATAGGTTTTTTAATGGATTTTATTTTTACAATTTTTT‑GTTTTTAGGCATATAAAAATCAAccc                                                                                                                          <  2:1225011/140‑1 (MQ=255)              gACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTT‑GTGTTTAGGCATATAAAAATCAACCCg                                                                                                                         >  2:604767/1‑140 (MQ=255)                   ccATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTT‑GTGTTTAGGCATATAAAAATCAACCCGCCatat                                                                                                                   >  1:493545/1‑140 (MQ=255)                          ttttttAATTGAAATTATTGGGTTGTTAATAATTTGGGTTGTTTTTTTTTTTTTAAATATCTATATAGGTCTGTAAATGGTTTTTATTTTTACAATTTTTT‑GTTTTTAGGCATAAAAAAACCAACCCGCCATATGAAcgg                                                                                                             <  2:1086017/139‑1 (MQ=255)                              ttAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTT‑GTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCggg                                                                                                         >  1:569667/1‑140 (MQ=255)                                   taaaaGTATTGTGTTGCTGATAATTTGAGCTTTTCTTTTTTTTTTAAATATCTATATAGGTCTTTTAATGGATTTTATTTTTACAATTTTTT‑GTTTTTAGGAATAAAAAAACCAACCCGCCATATGAACGGCGGGTTaaa                                                                                                    <  2:507759/138‑1 (MQ=255)                                     aaaGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTT‑GTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAat                                                                                                  >  1:1376351/1‑140 (MQ=255)                                                ttGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTT‑GTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACtt                                                                                       >  2:1613043/1‑140 (MQ=255)                                                ttGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTT‑GTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACtt                                                                                       >  2:1121148/1‑140 (MQ=255)                                                ttGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTT‑GTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACtt                                                                                       >  1:1580776/1‑140 (MQ=255)                                                  gCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTT‑GTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAg                                                                                     <  1:1121148/140‑1 (MQ=255)                                                   cTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTT‑GTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGc                                                                                    >  1:1205549/1‑140 (MQ=255)                                                   cTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTT‑GTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGc                                                                                    >  1:201005/1‑140 (MQ=255)                                                        attttGAGTTTTTTTTTTCTTTTTAAATATCTATATAGGTTTTTAAATGTTTTTTTTTTTTACAA‑TTTTT‑GTTTTTAGGCATAAAAAAACCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCaa                                                                              <  2:493545/138‑1 (MQ=255)                                                         ttttGAGTTTTTCTATTCTTTTTAAATATCTATATAGGTCTTTTAATGGTTTTTATTTTTACATTTTTTT‑GTGTTTAGGCATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCaa                                                                              <  1:23212/139‑1 (MQ=255)                                                         ttttGAGTTGTTCTATTTTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTTTTTTTACATTTTTTT‑GTTTTTAGGAATAAAAAAATCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCaa                                                                              <  1:1010564/139‑1 (MQ=255)                                                             gAGCTTTTTTATTTTTTTTAAATATCTATATAGGTCTTTTAATGGATTTTATTTTTACAATTTTTT‑GTTTTTAGGCATATAAAAACCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCAt                                                                          <  2:228711/140‑1 (MQ=255)                                                             gAGCTTTTCTATTTTTTTTAAATATTTATATGGGTTTGTTAATGGATTTTATTTTTACAATTTTTT‑GTTTTTAGGAATAAAAAAACCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCAt                                                                          <  2:1378352/140‑1 (MQ=255)                                                             gAGCTGTTCTTTTCTTTTTAAATATTTATATAGGTCTGTTAATGGTTTTTTTTTTTACAATTTTTT‑GTTTTTAGGCATAAAAAAATCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCAt                                                                          <  2:923939/140‑1 (MQ=255)                                                               gCTGTTTTTTTTTTTTTAAATATCTATATAGGTTTTTAAATGGATTTTTTTTTTAAATTTTTTT‑TTTTTAAGTAATAAAAAAAACAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTa                                                                        <  2:201005/140‑1 (MQ=255)                                                               gCTGTTCTATTTTTTTTAAATCTCTATATAGGTTTGTTAATGGTTTTTATTTTTACAATTTTTT‑GTTTTTAGGCATAAAAAAACCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTa                                                                        <  1:1460056/140‑1 (MQ=255)                                                                             tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTT‑GTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGc                                                          >  1:1452376/1‑140 (MQ=255)                                                                             tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTT‑GTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGc                                                          >  2:1193927/1‑140 (MQ=255)                                                                             tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTT‑GTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGGTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGc                                                          >  2:552651/1‑140 (MQ=255)                                                                             tttAAATATCTATATAGGTCTGGTAATGGATTTTATTTTTACAATTTTTT‑GTGTTTAGGCATCTAAAAATCAACCCGCCATATGAACGGCGGGTTTAAAAATTTACAACTTAGCAATCAACCATTAACGCTTGGTATAGc                                                          >  2:607853/1‑140 (MQ=255)                                                                             tttAAATATATATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTT‑GTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGc                                                          >  1:1451900/1‑140 (MQ=255)                                                                               tAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTT‑GTGTTTAGGCATAAAAAAACCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCtt                                                        <  1:1095149/140‑1 (MQ=255)                                                                                           tgggTCTTTTAATGGTTTTTATTTTTACTTTTTTTT‑GTTTTTAGAAATAAAAAAACCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGt                                            <  2:1022837/138‑1 (MQ=255)                                                                                              gTCTGTTAATGGATTTTATTTTTACAATTTTTT‑GTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGtttt                                         >  2:214473/1‑140 (MQ=255)                                                                                              gTCTGTTAATGGATTTTATTTTTACAATTTTTT‑GTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGtttt                                         >  2:1373238/1‑140 (MQ=255)                                                                                              gTCTGTTAATGGATTTTATTTTTACAATTTTTT‑GTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGt                                            <  1:1282162/137‑1 (MQ=255)                                                                                              gTCTGTTAATGGATTTTATTTTTACAATTTTTT‑GTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGt                                            >  2:1282162/1‑137 (MQ=255)                                                                                                ttGTTTATGGATTTTATTTTTACAATTTTTT‑GTTTTTAGTTATAAAAAAACCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTc                                       <  2:569667/139‑1 (MQ=255)                                                                                                ttGTTAATGGATTTTTTTTTTACATTTTTTT‑GTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTc                                       <  1:1194531/139‑1 (MQ=255)                                                                                                ttGTTAATGGATTTTTTTTTTAAATTTTTTT‑GTTTTTAGGAAAAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTc                                       <  2:714126/139‑1 (MQ=255)                                                                                                ttGTTAATGGATTTTATTTTTAAAATTTTTT‑GTGTTTAGGCATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTc                                       <  1:1012830/139‑1 (MQ=255)                                                                                                 tGTTAATGGATTTTATTTTTACAATTTTTT‑GTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATTTTTACAACTTAGCAATCAACCATTAAAGCTTGATATCGCCTTTTAAGTCGCGTTTTTCa                                      >  2:1061483/1‑140 (MQ=255)                                                                                                 tGTTAATGGATTTTATTTTTACAATTTTTT‑GTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTTAAGTCGCGTTTTTct                                      >  1:1022837/1‑139 (MQ=255)                                                                                                 tGTTAATGGATTTTATTTTTACAATTTTTT‑GTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCa                                      >  1:150686/1‑140 (MQ=255)                                                                                                 tGTTAATGGATTTTATTTTTACAATTTTTT‑GTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCa                                      >  2:1039242/1‑140 (MQ=255)                                                                                                 tGTTAATGGATTTTATTTTTACAATTTTTT‑GTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGGTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCa                                      >  2:777482/1‑140 (MQ=255)                                                                                                  tttAATGGTTTTTTTTTTTAAAATTTTTT‑GTGTTTAGGCATAAAAAAATCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCat                                     <  1:604767/139‑1 (MQ=255)                                                                                                  gtaaaTGTATTTTTTTTTTAAAATTTTTT‑GTTTTTAGGAAAAAAAAAAACACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCat                                     <  2:1562984/137‑1 (MQ=255)                                                                                                   ttAATGGATTTTATTTTTACAATTTTTT‑GTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTTAAGTCGCGTTTTTCata                                    >  1:710483/1‑140 (MQ=255)                                                                                                   ttAATGGATTTTATTTTTACAATTTTTT‑GTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGt                                            >  2:309193/1‑132 (MQ=255)                                                                                                   ttAATGGATTTTATTTTTACAATTTTTT‑GTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGt                                            <  1:309193/132‑1 (MQ=255)                                                                                                   ttAATGGATTTTATTTTTACAATTTTTT‑GTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCata                                    >  1:1030826/1‑140 (MQ=255)                                                                                                   ttAATGGATTTTATTTTTACAATTTTTT‑GTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCata                                    >  2:709270/1‑140 (MQ=255)                                                                                                   ttAATGGATTTTATTTTTACAATTTTTT‑GTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCata                                    >  1:115649/1‑140 (MQ=255)                                                                                                   ttAATGGATTTTATTTTTACAATTTTTT‑GTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCata                                    >  2:1068597/1‑140 (MQ=255)                                                                                                   ttAATGGATTTTATTTTTACAATTTTTT‑GTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGGCGCGTTTTTCata                                    >  1:487127/1‑140 (MQ=255)                                                                                                     attagcttttattttT‑CAATTTTTTAAAGTTTTGATATACAAAAAAAATCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAGCCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATc                                  <  2:864020/134‑1 (MQ=255)                                                                                                     aatgttttttttttttAAAATTTTTT‑TTTTTTAGAAATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATc                                  <  2:487127/134‑1 (MQ=255)                                                                                                     aatgttttttttttttAAAATTTTTT‑GTTTTTAGGAATAAAAAAAACAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATc                                  <  2:1205549/134‑1 (MQ=255)                                                                                                        ggATTTTATTTTTACAATTTTTT‑GTGTTTAGGCATATAAAAATCAGCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTg                               >  2:385243/1‑140 (MQ=255)                                                                                                        ggATTTTATTTTTACAATTTTTT‑GTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTTAACTATTTACAACTTAGCAATCAACCATTAACGCTTGATATTGCTTTTAAAGTCCCGTTTTTTATATCCTg                               >  2:39600/1‑140 (MQ=255)                                                                                                        ggATTTTATTTTTACAATTTTTT‑GTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTg                               >  2:126583/1‑140 (MQ=255)                                                                                                        ggATTTTATTTTTACAATTTTTT‑GTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTg                               >  1:714126/1‑140 (MQ=255)                                                                                                            tttattttTTAAATTTTTT‑TTTTGAAGGAAAAAAAAATATAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGtata                           <  2:913255/140‑1 (MQ=255)                                                                                                                       aaTTTTTT‑GTGTTTAGGCATATAAAAATCAGCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGAcgcg                <  1:385243/140‑1 (MQ=255)                                                                                                                            ttt‑GTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACgg           <  1:709270/140‑1 (MQ=255)                                                                                                                              t‑gttTTTAGGCATAAAAAAATCCACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGc         <  2:710483/140‑1 (MQ=255)                                                                                                                              t‑gttTTTAGGAATAAAAAAATCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGc         <  1:894309/140‑1 (MQ=255)                                                                                                                              t‑gttTTTAGACATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGc         <  2:1451900/140‑1 (MQ=255)                                                                                                                              t‑gtgTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGc         <  1:1193927/140‑1 (MQ=255)                                                                                                                              t‑gtgTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGc         <  1:1039242/140‑1 (MQ=255)                                                                                                                              t‑gtgTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGc         >  2:1426173/1‑140 (MQ=255)                                                                                                                                      aGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTc  >  1:394519/1‑140 (MQ=255)                                                                                                                                             |                                                                                                                                     GGGTTATAAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTT‑GTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTC  >  NC_000913/752986‑753257

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑