Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,926,3660AC21.9% 231.0 / 18.8 96G30G (GGT→GGG) mioCflavoprotein MioC
Reads supporting (aligned to +/- strand):  ref base A (59/16);  new base C (0/21);  total (59/37)
Fisher's exact test for biased strand distribution p-value = 1.65e-11
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 113 total aligned reads displayed.

TGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGT  >  NC_000913/3926229‑3926503
                                                                                                                                         |                                                                                                                                          
tGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑cc                                                                                                                                         >  1:1430386/1‑140 (MQ=255)
  ttCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATACCCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCg                                                                                                                                       <  1:277492/140‑1 (MQ=255)
    ccTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATACCCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGCCCGTGCAGCGTTTCGGTGGAAAAA‑CCCGcc                                                                                                                                     <  2:827300/140‑1 (MQ=255)
     cTGCAATGCTTCATAGAAAGGAGAACGGTTGTCCGTAATACCTCCGGCTCCGTGGGTGGGGCGGAAAACCAGCCAGATCCCTGAGGCAGATAAATCTTCTAACAGGGGACCGTGCGGGGTTACGGTGGAAAAT‑CCCGCct                                                                                                                                    <  2:1655210/140‑1 (MQ=255)
       gCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCctct                                                                                                                                  >  1:1061034/1‑140 (MQ=255)
       gCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCctct                                                                                                                                  >  2:20359/1‑140 (MQ=255)
            gCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAg                                                                                                                             >  1:363060/1‑140 (MQ=255)
                       aggagaaaggTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTGAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCa                                                                                                                  >  1:557229/1‑140 (MQ=255)
                       aggagaaaggTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCa                                                                                                                  >  1:571494/1‑140 (MQ=255)
                       aggagaaaggTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCa                                                                                                                  >  2:696535/1‑140 (MQ=255)
                       aggagaaaggTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCa                                                                                                                  >  1:267840/1‑140 (MQ=255)
                       aggagaaaggTTGTACGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGGAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGTTTTTCAGCCa                                                                                                                  >  2:398979/1‑140 (MQ=255)
                        ggagaaagtTTGTCGGGAATATCTCCGGCACGGTGGGTGGAGCTGATAACCAGCCATTTCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGGGTTTGGGGGATAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAg                                                                                                                 <  2:1430386/140‑1 (MQ=255)
                         gagaaaggTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAgg                                                                                                                >  2:1113067/1‑140 (MQ=255)
                          agaaaggTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGgt                                                                                                               >  2:1219314/1‑140 (MQ=255)
                          agaaaggTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGgt                                                                                                               >  1:629751/1‑140 (MQ=255)
                           gaaaggTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGgtg                                                                                                              <  2:841416/140‑1 (MQ=255)
                            aaaggTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGgtgt                                                                                                             >  1:1732341/1‑140 (MQ=255)
                            aaaggTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGgtgt                                                                                                             >  2:1641444/1‑140 (MQ=255)
                            aaaggTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGgtgt                                                                                                             >  1:1662703/1‑140 (MQ=255)
                             aaggTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGtt                                                                                                            <  1:1461051/140‑1 (MQ=255)
                             aaggTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGtt                                                                                                            <  1:1113067/140‑1 (MQ=255)
                               ggTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCt                                                                                                          <  1:20359/140‑1 (MQ=255)
                               ggTTGTCCGGAATATCCCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCt                                                                                                          <  2:1153836/140‑1 (MQ=255)
                                  tgcccGCAATTTCGCCGGCTCCGTGGGGGGGGCAAATACCGAGCGAGATCCCTGAGGGAGGAAAATCTTCTAACAGTGAACAGAGAGGGTTTTCGGTGGCAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCt                                                                                                       <  2:953640/137‑1 (MQ=255)
                                  tGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTACCAGCGGACGGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCt                                                                                                       <  2:949006/140‑1 (MQ=255)
                                   gTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCTTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTa                                                                                                      >  1:1364100/1‑140 (MQ=255)
                                   gTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTa                                                                                                      >  1:436289/1‑140 (MQ=255)
                                   gTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTa                                                                                                      >  1:1478185/1‑140 (MQ=255)
                                    tCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTAc                                                                                                     >  1:311527/1‑140 (MQ=255)
                                    tCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGCGTTCTGCTAc                                                                                                     >  2:724312/1‑140 (MQ=255)
                                      cGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACat                                                                                                   >  1:797757/1‑140 (MQ=255)
                                             tctcGGGCCCCGGGGGTGGGGCCGAAACCCACCCAGCCCCTTGAGGCAGAAAAATCTTCTAACGGCGGCCGGCGCCGCGTTTGGGGGGAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGc                                                                                            <  2:1478185/140‑1 (MQ=255)
                                              ctcCGGCCCCGTGGGGGGAGCTGATACCCAGCCAGACCCCTGAGGCAGGTAAATCTTCTAACAGCGGCCCGTGCAGCGTTTGGGTGGAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCa                                                                                           <  2:705482/140‑1 (MQ=255)
                                              ctcCGGCCCCGGGGGGGGAGTTGATAACCAGCCAGATCCTTGAGGCAGGTAAATCTTCTAACAGCGGCCGGTGCAGCTTTTCGGTGGAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCa                                                                                           <  2:1364100/140‑1 (MQ=255)
                                              ccccGGCCCGGGGGGGGGGGCTGATAACCAGCCAGACCCCTGGGGCGGGAAAATTTTCTAACAGGGGCCGGTGCAGCTTTTGGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCa                                                                                           <  2:1651927/138‑1 (MQ=255)
                                                 cGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCAccg                                                                                        >  1:791828/1‑140 (MQ=255)
                                                   gCACGGTGGGGGGAGCGGAAACCCAGCCGGACCCCGGAGGCGGGTAAATTTTCAAACAGCGGCCCGTGCAGCGTTTCGGTGGAAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCAccgcc                                                                                      <  2:247598/140‑1 (MQ=255)
                                                   gCACGGGGGGTGGAGTTAAAACCCAGCCAGACCCCGGGGGCGGGAAATTCTTCTAACGGGGGCCGGTGCAGCGTTGGGGTGGAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCAccgcc                                                                                      <  2:1310297/140‑1 (MQ=255)
                                                   gCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCAccgcc                                                                                      >  1:1017120/1‑140 (MQ=255)
                                                     cccGTGGGGGGAGCTGATACCCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGCCCGTGCAGCGTTTCGGTGGAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGa                                                                                    <  2:629751/139‑1 (MQ=255)
                                                         tgggtggAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGt                                                                                >  1:1651927/1‑140 (MQ=255)
                                                         tgggtggAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGt                                                                                >  2:1289027/1‑140 (MQ=255)
                                                         tgggtggAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGt                                                                                >  1:108588/1‑140 (MQ=255)
                                                         tgggtggAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGt                                                                                >  1:1310297/1‑140 (MQ=255)
                                                             tggAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGtgctg                                                                            >  2:319659/1‑140 (MQ=255)
                                                             ggggccTGAAACCCAGCCAGATCCTGGAGGCAGGTAAATCTTCTAACAGGGGACGGTGCGCCTTTTGGGTGGAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGtgctg                                                                            <  2:798239/135‑1 (MQ=255)
                                                             gggAGCTGATACCCAGCAAGATCCCTGAGGCAGGAAAATTTTCAAACAGCGGCCGGTGCGGCTTTTGGGTGGAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGtgctg                                                                            <  2:1391903/139‑1 (MQ=255)
                                                                aGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCg                                                                         >  1:1391903/1‑140 (MQ=255)
                                                                     agacagagcaagACCCCTGAGCCAGGAAATTCTTCAAACAGCGGCCCGTGCAGCTTTTCGGTGAAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGAt                                                                    <  2:1306802/134‑1 (MQ=255)
                                                                     aTAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGAt                                                                    >  2:141157/1‑140 (MQ=255)
                                                                     aTAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGAt                                                                    >  1:1192013/1‑140 (MQ=255)
                                                                      tAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATa                                                                   <  1:141157/140‑1 (MQ=255)
                                                                      aacccacccagCTCCCGGGGGCAGGTAAATCTTCTAACAGCGGCCCGTGCGGGTTTTGGGTGGAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATa                                                                   <  2:704480/137‑1 (MQ=255)
                                                                            gccagATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTg                                                             >  1:704480/1‑140 (MQ=255)
                                                                            gcaagATCCGGGGGGCAGTAAAATCTTCTACCAGGGGCCGGTGCGGCTTTTGGGTGGAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTg                                                             <  2:591594/137‑1 (MQ=255)
                                                                                gacccttGAGGCAGGAAAATCTTCTAACAGCGGACCGTGCAGCTTTTGGGTGGTAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGatat                                                         <  1:1501811/134‑1 (MQ=255)
                                                                                 accccTGAGGCAGGAAAATCTTCAAACAGCGGCCCGGGCAGGTTTTCGGTGGAAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATc                                                        <  1:1641444/138‑1 (MQ=255)
                                                                                      tGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTgtct                                                   >  1:1306802/1‑137 (MQ=255)
                                                                                      tGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCa                                                   >  2:983316/1‑140 (MQ=255)
                                                                                           cAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAAc                                              >  1:1532695/1‑140 (MQ=255)
                                                                                           cAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAAc                                              >  1:1420259/1‑140 (MQ=255)
                                                                                             ggaaaaTTTTCAAACAGCGGCCGGTGCAGCTTTTCGGTGTAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCg                                            <  2:311527/137‑1 (MQ=255)
                                                                                             ggTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCg                                            >  2:1308353/1‑140 (MQ=255)
                                                                                             ggTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCg                                            >  1:1397726/1‑140 (MQ=255)
                                                                                             ggTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCg                                            >  2:1549373/1‑140 (MQ=255)
                                                                                             ggTAAATCTTCTAACAGCGGACCGTGCAGCGGTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCg                                            >  2:367379/1‑140 (MQ=255)
                                                                                              gTAAATCTTCTAACGGGGGCCGGGGCGGTTTTTCGGTGGAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGc                                           <  2:557229/140‑1 (MQ=255)
                                                                                              gTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGc                                           >  1:1392755/1‑140 (MQ=255)
                                                                                              gTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGc                                           >  2:1434774/1‑140 (MQ=255)
                                                                                              gTAAATCTTCAAACAGCGGCCCGTGCAGCTTTTCGGTGGAAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGc                                           <  1:74716/140‑1 (MQ=255)
                                                                                                aaaTCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCa                                         <  1:1549373/140‑1 (MQ=255)
                                                                                                        tAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTttatt                                 >  2:670011/1‑140 (MQ=255)
                                                                                                         aaCAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTttatta                                >  1:1363825/1‑140 (MQ=255)
                                                                                                          aCAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTaa                               >  1:537367/1‑140 (MQ=255)
                                                                                                            ggCGGCCCGTGCAGCTTTTCGGTGGTAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAaga                             <  1:664101/139‑1 (MQ=255)
                                                                                                            aggggcccGTGCAGCTTTCGGGTGGAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAaga                             <  2:1662703/134‑1 (MQ=255)
                                                                                                            aggggACCGTGCGGGTTTTCGGGGGAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAaga                             <  1:724312/137‑1 (MQ=255)
                                                                                                             gCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTttattactgt                            >  1:1178369/1‑136 (MQ=255)
                                                                                                              cGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGt                           >  2:1692655/1‑140 (MQ=255)
                                                                                                              cGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGt                           >  1:247142/1‑140 (MQ=255)
                                                                                                              cGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATATGCCATAAACCGc                                           >  2:1599307/1‑124 (MQ=255)
                                                                                                               ggACCGTGCAGCGTTTGGGTGGAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTg                          <  1:494974/140‑1 (MQ=255)
                                                                                                               ggACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTg                          >  1:1655672/1‑140 (MQ=255)
                                                                                                               ggACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTg                          >  1:1053501/1‑140 (MQ=255)
                                                                                                                gACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGCGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTgg                         >  1:1216627/1‑140 (MQ=255)
                                                                                                                 cccGTGCACCTTTGGGGGGGAAAAC‑CCCGCCTCTTCCAGTTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGc                        <  1:398979/139‑1 (MQ=255)
                                                                                                                     ggcggtttttGGGGGGAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTAt                    <  2:1053501/133‑1 (MQ=255)
                                                                                                                      gCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTAtt                   >  1:1569293/1‑140 (MQ=255)
                                                                                                                         gtttctCGTTGGAAAGA‑CCCCCCTCTTCCAGCTTTACAGCCAGGTGTTCTGCTTCATATTCGGCCCCGCCGAGGGTTTTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTa                <  2:1216627/135‑1 (MQ=255)
                                                                                                                          cGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTAc               >  2:896883/1‑140 (MQ=255)
                                                                                                                           gTTTCGGGTGTAAAACCCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTAc               <  2:1744648/140‑1 (MQ=255)
                                                                                                                                gttgaaaaac‑CCCGCCTCTTCCAGTTTTTCAGCCGGGTGTTCTGTTACATTTTCGGCTCCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCtgtg         <  2:436289/134‑1 (MQ=255)
                                                                                                                                ggtggtAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCtgtg         <  1:319659/140‑1 (MQ=255)
                                                                                                                                  tggtAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGaa       <  1:1602194/140‑1 (MQ=255)
                                                                                                                                  tggtAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGaa       <  1:1692655/140‑1 (MQ=255)
                                                                                                                                  gggaaaac‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGaa       <  1:512416/136‑1 (MQ=255)
                                                                                                                                    gtAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAAcg     >  2:677189/1‑140 (MQ=255)
                                                                                                                                       aaa‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGt  >  2:554768/1‑140 (MQ=255)
                                                                                                                                       aaa‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGt  <  1:983316/140‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                          
TGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGGACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGT  >  NC_000913/3926229‑3926503

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑