Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	938,200	G→T	V69V (GTG→GTT)	rarA →	recombination factor

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	938,200	0	G	T	100.0%	309.7 / NA	88	V69V (GTG→GTT)	rarA	recombination factor
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (49/39);  total (49/39)

AGCACAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTGATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACG  >  NC_000913/938068‑938333                                                                                                                                     |                                                                                                                                      aGCACAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGccc                                                                                                                                <  2:76874/140‑1 (MQ=255)   cacaGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGc                                                                                                                              <  1:77978/140‑1 (MQ=255)           atCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGaa                                                                                                                      <  1:465951/140‑1 (MQ=255)             cGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACg                                                                                                                    <  2:945600/140‑1 (MQ=255)             cGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACg                                                                                                                    <  1:1269895/140‑1 (MQ=255)             cGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACg                                                                                                                    >  1:401280/1‑140 (MQ=255)               gCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCt                                                                                                                  <  2:69486/140‑1 (MQ=255)                ccAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTg                                                                                                                 >  2:776624/1‑140 (MQ=255)                  aGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGAt                                                                                                               >  1:1030375/1‑140 (MQ=255)                  aGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGAt                                                                                                               >  1:13131/1‑140 (MQ=255)                  aGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGAt                                                                                                               >  2:238431/1‑140 (MQ=255)                  aGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGAt                                                                                                               >  2:187393/1‑140 (MQ=255)                  aGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGAt                                                                                                               >  1:1467298/1‑140 (MQ=255)                  aGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGAt                                                                                                               >  2:1374976/1‑140 (MQ=255)                    cAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACg                                                                                                                    >  2:818711/1‑133 (MQ=255)                    cAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACg                                                                                                                    <  1:818711/133‑1 (MQ=255)                        aTTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGaa                                                                                                         <  2:248380/140‑1 (MQ=255)                                 ctgCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCt                                                                                                <  2:13131/140‑1 (MQ=255)                                  tgCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTg                                                                                               >  2:872984/1‑140 (MQ=255)                                    cGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGcc                                                                                             >  1:941157/1‑140 (MQ=255)                                           gCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACct                                                                                      <  1:1374976/140‑1 (MQ=255)                                               ttGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTgg                                                                                  <  1:777320/140‑1 (MQ=255)                                               ttGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTgg                                                                                  <  1:1203487/140‑1 (MQ=255)                                                 gCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCg                                                                                <  2:1030375/140‑1 (MQ=255)                                                 gCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCg                                                                                >  2:1233321/1‑140 (MQ=255)                                                 gCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCg                                                                                <  2:451906/140‑1 (MQ=255)                                                     cgcgcTATCGAAGCCGGGTATTTACATTCTATGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGaa                                                                            >  1:953750/1‑140 (MQ=255)                                                      gcgcTATCGAAGCCGGGCATTTACATTCTATGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTgg                                                                                  <  1:999131/133‑1 (MQ=255)                                                      gcgcTATCGAAGCCGGGCATTTACATTCTATGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTgg                                                                                  >  2:999131/1‑133 (MQ=255)                                                      gcgcTATCGAAGCCGGGCATTTACATTCTATGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGaaa                                                                           >  1:1453042/1‑140 (MQ=255)                                                            tCGAAGCCGGGCATTTACATTCTATGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGAtt                                                                     >  1:973617/1‑140 (MQ=255)                                                                aGCCGGGCATTTACATTCTATGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTcgcg                                                                 <  2:941157/140‑1 (MQ=255)                                                                      gCATTTACATTCTATGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGc                                                             >  2:263130/1‑138 (MQ=255)                                                                      gCATTTACATTCTATGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGc                                                             <  1:263130/138‑1 (MQ=255)                                                                      gCATTTACATTCTATGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGa                                                           >  2:892173/1‑140 (MQ=255)                                                                      gCATTTACATTCTATGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGa                                                           >  2:1001679/1‑140 (MQ=255)                                                                      gCATTTACATTCTATGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGa                                                           >  2:621704/1‑140 (MQ=255)                                                                               ttCTATGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAgcgcg                                                  <  1:238431/140‑1 (MQ=255)                                                                                tCTATGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAgcgcgc                                                 >  2:806255/1‑140 (MQ=255)                                                                                  tATGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGccc                                               >  1:1336904/1‑140 (MQ=255)                                                                                  tATGATCCTCTGGGGGCCGCCGGGTACCAGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGccc                                               >  2:921913/1‑140 (MQ=255)                                                                                    tGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCgg                                             >  2:1422848/1‑140 (MQ=255)                                                                                       tCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCaa                                          <  2:1453042/140‑1 (MQ=255)                                                                                       tCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCaa                                          <  1:187393/140‑1 (MQ=255)                                                                                          tctGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAAc                                       >  1:444004/1‑140 (MQ=255)                                                                                          tctGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAAc                                       <  1:621704/140‑1 (MQ=255)                                                                                          tctGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAAc                                       >  1:647645/1‑140 (MQ=255)                                                                                          tctGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAAc                                       >  2:865218/1‑140 (MQ=255)                                                                                          tctGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAAc                                       >  2:818768/1‑140 (MQ=255)                                                                                          tctGGGGGCCGCCGGGTACCGGCAAAACAACTCCCGCTGCAGTGATTGCCCCCTAAGCAAACGCTGATGTCGCACGTATTTCTGCCGTAACCTCTGGCGTGAAATAAATTCGCGAGGCGAGCGAGCGCGCCCGGCAAAAc                                       >  2:1295343/1‑140 (MQ=255)                                                                                            tGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAACCg                                     <  2:444004/140‑1 (MQ=255)                                                                                            tGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAACCg                                     <  2:297720/140‑1 (MQ=255)                                                                                            tGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAACCg                                     <  2:647645/140‑1 (MQ=255)                                                                                              ggggCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAACCGCa                                   >  2:1466097/1‑140 (MQ=255)                                                                                                   cgccgGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAACCGCAATGCa                              >  1:1260381/1‑140 (MQ=255)                                                                                                   cgccgGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAACCGCAATGCa                              >  2:1312699/1‑140 (MQ=255)                                                                                                   cgccgGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAACCGCAATGCa                              >  1:148530/1‑140 (MQ=255)                                                                                                   cgccgGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAACCGCAATGCa                              >  2:1243404/1‑140 (MQ=255)                                                                                                   cgccgGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAACCGCAATGCa                              >  1:209987/1‑140 (MQ=255)                                                                                                   cgccgGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAACCGCAATGCa                              >  2:714416/1‑140 (MQ=255)                                                                                                   cgccgGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAACCGCAATGCa                              >  2:5214/1‑140 (MQ=255)                                                                                                   cgccgGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAACCGCAATGCa                              >  1:235195/1‑140 (MQ=255)                                                                                                   cgccgGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAACCGCAATGCa                              >  1:620635/1‑140 (MQ=255)                                                                                                     ccgGGTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAACCGCAATGCAgg                            >  2:203861/1‑140 (MQ=255)                                                                                                        ggTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAACCGCAATGCAGGTcg                         <  1:1233321/140‑1 (MQ=255)                                                                                                        ggTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAACCGCAATGCAGGTcg                         <  1:1466097/140‑1 (MQ=255)                                                                                                        ggTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAACCGCAATGCAGGTcg                         >  2:1008506/1‑140 (MQ=255)                                                                                                        ggTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAACCGCAATGCAGGTcg                         >  1:129447/1‑140 (MQ=255)                                                                                                         gTACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAACCGCAATGCAGGTcgc                        <  1:921913/140‑1 (MQ=255)                                                                                                          tACCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAACCGCAATGCAGGTcgcc                       <  2:148581/140‑1 (MQ=255)                                                                                                           aCCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAACCGCAATGCAGGTcgccg                      <  2:401280/140‑1 (MQ=255)                                                                                                           aCCGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAACCGCAATGCAGGTcgccg                      <  1:776624/140‑1 (MQ=255)                                                                                                            ccGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAACCGCAATGCAGGTcgccgc                     <  2:235195/140‑1 (MQ=255)                                                                                                            ccGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAACCGCAATGCAGGTcgccgc                     <  1:865218/140‑1 (MQ=255)                                                                                                             cGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCa                    <  1:1312699/140‑1 (MQ=255)                                                                                                             cGGCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCa                    >  2:1363500/1‑140 (MQ=255)                                                                                                              ggCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCAc                   <  1:714416/140‑1 (MQ=255)                                                                                                              ggCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCAc                   <  1:1243404/140‑1 (MQ=255)                                                                                                              ggCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCAc                   <  1:1258667/140‑1 (MQ=255)                                                                                                               gCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACt                  >  1:156339/1‑140 (MQ=255)                                                                                                               gCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACt                  >  1:1288516/1‑140 (MQ=255)                                                                                                               gCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACt                  >  2:54816/1‑140 (MQ=255)                                                                                                               gCAAAACAACTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACt                  >  2:446852/1‑140 (MQ=255)                                                                                                                       acTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCtttt          <  2:1336904/140‑1 (MQ=255)                                                                                                                       acTCTCGCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCtttt          >  1:1343369/1‑140 (MQ=255)                                                                                                                             gCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGa    >  2:125199/1‑140 (MQ=255)                                                                                                                             gCTGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGa    >  2:1138371/1‑140 (MQ=255)                                                                                                                               tGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACg  <  2:129447/140‑1 (MQ=255)                                                                                                                               tGAAGTTATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACg  <  2:1467298/140‑1 (MQ=255)                                                                                                                                     |                                                                                                                                      AGCACAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTGATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACG  >  NC_000913/938068‑938333

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑