BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,860,666	C→A	S128R (AGC→AGA)	yidL →	putative DNA‑binding transcriptional regulator YidL

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,860,666	0	C	A	100.0%	368.1 / NA	104	S128R (AGC→AGA)	yidL	putative DNA‑binding transcriptional regulator YidL
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (64/40); total (64/40)

Only 100 of 105 total aligned reads displayed.

GCATGGCAACTGTATTATATTCTTAAAGCCAATGGATATTCACTCTTATCACTGTGAAGGTTTAGTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGCGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGACGAAAATTATTTATCAGTGGATTTGTCTTAT  >  NC_000913/3860534‑3860800

gCATGGCAACTGTATTATATTCTTAAAGCCAATGGATATTCACTCTTATCACTGTGAAGGTTTAGTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGttattt                                                                                                                                 >  2:652344/1‑140 (MQ=255)

gCATGGCAACTGTATTATATTCTTAAAGCCAATGGATATTCACTCTTATCACTGTGAAGGTTTAGTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGttattt                                                                                                                                 >  2:1226552/1‑140 (MQ=255)

gCATGGCAACTGTATTATATTCTTAAAGCCAATGGATATTCACTCTTATCACTGTGAAGGTTTAGTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGttattt                                                                                                                                 >  2:49835/1‑140 (MQ=255)

gCATGGCAACTGTATTATATTCTTAAAGCCAATGGATATTCACTCTTATCACTGTGAAGGTTTAGTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGttattt                                                                                                                                 >  1:1196042/1‑140 (MQ=255)

  aTGGCAACTGTATTATATTCTTAAAGCCAATGGATATTCACTCTTATCACTGTGAAGGTTTAGTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGttatttat                                                                                                                               >  2:971328/1‑140 (MQ=255)

   tGGCAACTGTATTATATTCTTAAAGCCAATGGATATTCACTCTTATCACTGTGAAGGTTTAGTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTtata                                                                                                                              >  1:664520/1‑140 (MQ=255)

    ggCAACTGTATTATATTCTTAAAGCCAATGGATATTCACTCTTATCACTGTGAAGGTTTAGTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATaa                                                                                                                             >  2:1226824/1‑140 (MQ=255)

      cAACTGTATTATATTCTTAAAGCCAATGGATATTCACTCTTATCACTGTGAAGGTTTAGTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATg                                                                                                                           >  2:585264/1‑140 (MQ=255)

         cTGTATTATATTCTTAAAGCCAATGGATATTCACTCTTATCACTGTGAAGGTTTAGTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCg                                                                                                                        <  1:811795/140‑1 (MQ=255)

         cTGTATTATATTCTTAAAGCCAATGGATATTCACTCTTATCACTGTGAAGGTTTAGTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCg                                                                                                                        <  1:210548/140‑1 (MQ=255)

               tataTTCTTAAAGCCAATGGATATTCACTCTTATCACTGTGAAGGTTTAGTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAAttt                                                                                                                  >  1:27115/1‑140 (MQ=255)

                atatTCTTAAAGCCAATGGATATTCACTCTTATCACTGTGAAGGTTTAGTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTta                                                                                                                 <  1:910190/140‑1 (MQ=255)

                atatTCTTAAAGCCAATGGATATTCACTCTTATCACTGTGAAGGTTTAGTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTta                                                                                                                 <  2:561685/140‑1 (MQ=255)

                    tCTTAAAGCCAATGGATATTCACTCTTATCACTGTGAAGGTTTAGTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAAt                                                                                                             >  2:777230/1‑140 (MQ=255)

                    tCTTAAAGCCAATGGATATTCACTCTTATCACTGTGAAGGTTTAGTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAAt                                                                                                             >  2:416571/1‑140 (MQ=255)

                    tCTTAAAGCCAATGGATATTCACTCTTATCACTGTGAAGGTTTAGTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAAt                                                                                                             >  1:971910/1‑140 (MQ=255)

                      ttAAAGCCAATGGATATTCACTCTTATCACTGTGAAGGTTTAGTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCa                                                                                                           >  2:1250131/1‑140 (MQ=255)

                      ttAAAGCCAATGGATATTCACTCTTATCACTGTGAAGGTTTAGTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCa                                                                                                           >  1:854408/1‑140 (MQ=255)

                      ttAAAGCCAATGGATATTCACTCTTATCACTGTGAAGGTTTAGTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCa                                                                                                           >  1:455638/1‑140 (MQ=255)

                      ttAAAGCCAATGGATATTCACTCTTATCACTGTGAAGGTTTAGTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCa                                                                                                           >  1:445983/1‑140 (MQ=255)

                        aaaGCCAATGGATATTCACTCTTATCACTGTGAAGGTTTAGTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAgg                                                                                                         >  1:98468/1‑140 (MQ=255)

                        aaaGCCAATGGATATTCACTCTTATCACTGTGAAGGTTTAGTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAgg                                                                                                         >  2:1379493/1‑140 (MQ=255)

                                      ttCACTCTTATCACTGTGAAGGTTTAGTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGtt                                                                                           >  1:935465/1‑140 (MQ=255)

                                         aCTCTTATCACTGTGAAGGTTTAGTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCt                                                                                        >  2:728016/1‑140 (MQ=255)

                                         aCTCTTATCACTGTGAAGGTTTAGTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCt                                                                                        <  1:652344/140‑1 (MQ=255)

                                            ctTATCACTGTGAAGGTTTAGTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAg                                                                                     >  2:1126916/1‑140 (MQ=255)

                                              tATCACTGTGAAGGTTTAGTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGtt                                                                                   >  2:351154/1‑140 (MQ=255)

                                               aTCACTGTGAAGGTTTAGTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTg                                                                                          >  1:74949/1‑132 (MQ=255)

                                               aTCACTGTGAAGGTTTAGTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTg                                                                                          <  2:74949/132‑1 (MQ=255)

                                               aTCACTGTGAAGGTTTAGTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTta                                                                                  >  1:428578/1‑140 (MQ=255)

                                               aTCACTGTGAAGGTTTAGTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTta                                                                                  >  1:549161/1‑140 (MQ=255)

                                                     gtgAAGGTTTAGTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACt                                                                            >  1:685385/1‑140 (MQ=255)

                                                     gtgAAGGTTTAGTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACt                                                                            >  2:1033140/1‑140 (MQ=255)

                                                     gtgAAGGTTTAGTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACt                                                                            >  2:191251/1‑140 (MQ=255)

                                                     gtgAAGGTTTAGTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACt                                                                            >  2:1461260/1‑140 (MQ=255)

                                                            tttAGTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAg                                                                     <  2:685385/140‑1 (MQ=255)

                                                              tAGTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGaa                                                                   >  1:646207/1‑140 (MQ=255)

                                                              tAGTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGaa                                                                   >  1:181191/1‑140 (MQ=255)

                                                               aGTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGCAATTTATAATCAGGAACTAATCGAAGTTGCTGAGTTAATAACTTCACCAGAAg                                                                  <  1:1226824/140‑1 (MQ=255)

                                                               aGTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAg                                                                  <  1:191251/140‑1 (MQ=255)

                                                                gTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGc                                                                 >  2:883909/1‑140 (MQ=255)

                                                                gTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGc                                                                 >  2:1487086/1‑140 (MQ=255)

                                                                                     gaATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGt                                            <  1:454995/140‑1 (MQ=255)

                                                                                     gaATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGt                                            <  2:646207/140‑1 (MQ=255)

                                                                                      aaTTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTc                                           >  2:57487/1‑140 (MQ=255)

                                                                                      aaTTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTc                                           >  2:42273/1‑140 (MQ=255)

                                                                                      aaTTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTc                                           >  1:1370129/1‑140 (MQ=255)

                                                                                      aaTTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTc                                           >  1:794871/1‑140 (MQ=255)

                                                                                      aaTTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTc                                           >  2:133931/1‑140 (MQ=255)

                                                                                      aaTTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTc                                           >  1:431258/1‑140 (MQ=255)

                                                                                           aCCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCttt                                      >  1:1483306/1‑140 (MQ=255)

                                                                                           aCCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCttt                                      >  2:495985/1‑140 (MQ=255)

                                                                                           aCCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCttt                                      >  2:642201/1‑140 (MQ=255)

                                                                                               ccaccaGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTg                                  <  2:1239505/140‑1 (MQ=255)

                                                                                                caccaGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGa                                 >  2:268292/1‑140 (MQ=255)

                                                                                                caccaGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGa                                 >  1:1018201/1‑140 (MQ=255)

                                                                                                caccaGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGa                                 >  1:692516/1‑140 (MQ=255)

                                                                                                caccaGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGa                                 >  1:570783/1‑140 (MQ=255)

                                                                                                caccaGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGa                                 <  1:509107/140‑1 (MQ=255)

                                                                                                 accaGTATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGAc                                <  2:570783/140‑1 (MQ=255)

                                                                                                      tATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGACg                               <  1:1193281/136‑1 (MQ=255)

                                                                                                      tATGATGGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGACg                               >  2:1193281/1‑136 (MQ=255)

                                                                                                           tgGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATTAGGAACTCAACGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAAGAATCTGGCAGTCGCTTTTCTGACGAAAattatt                      >  2:1092600/1‑140 (MQ=255)

                                                                                                           tgGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGACGAAAattatt                      >  2:255880/1‑140 (MQ=255)

                                                                                                           tgGATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGACGAAAattatt                      >  2:1111850/1‑140 (MQ=255)

                                                                                                             gATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGACGAAAAttattta                    >  1:534990/1‑140 (MQ=255)

                                                                                                             gATATTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGACGAAAAttattta                    >  2:1484106/1‑140 (MQ=255)

                                                                                                               tatTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGACGAAAATTATTTATc                  <  1:49835/140‑1 (MQ=255)

                                                                                                               tatTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAACCAGGACCTCACCGAAGCTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTCACGAAAATTATTTATc                  <  1:1226552/140‑1 (MQ=255)

                                                                                                                atTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGACGAAAATTATTTATCa                 <  2:664520/140‑1 (MQ=255)

                                                                                                                atTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGACGAAAATTATTTATCa                 >  1:1233073/1‑140 (MQ=255)

                                                                                                                atTCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGACGAAAATTATTTATCa                 >  2:349473/1‑140 (MQ=255)

                                                                                                                 ttCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGACGAAAATTATTTATCAg                <  1:777230/140‑1 (MQ=255)

                                                                                                                  tCCCGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGACGAAAATTATTTATCAGt               >  2:1322679/1‑140 (MQ=255)

                                                                                                                    ccGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGACGAAAATTATTTATCAGTgg             >  1:104142/1‑140 (MQ=255)

                                                                                                                    ccGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGACGAAAATTATTTATCAGTgg             >  1:1176630/1‑140 (MQ=255)

                                                                                                                    ccGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGACGAAAATTATTTATCAGTgg             <  1:255880/140‑1 (MQ=255)

                                                                                                                     cGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGACGAAAATTATTTATCAGTGGa            <  2:431258/140‑1 (MQ=255)

                                                                                                                     cGTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGACGAAAATTATTTATCAGTGGa            <  2:651957/140‑1 (MQ=255)

                                                                                                                      gTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGACGAAAATTATTTATCAGTGGAt           >  2:1082405/1‑140 (MQ=255)

                                                                                                                      gTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGACGAAAATTATTTATCAGTGGAt           <  1:971328/140‑1 (MQ=255)

                                                                                                                      gTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGACGAAAATTATTTATCAGTGGAt           <  2:534990/140‑1 (MQ=255)

                                                                                                                      gTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGACGAAAATTATTTATCAGTGGAt           <  1:883909/140‑1 (MQ=255)

                                                                                                                      gTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGACGAAAATTATTTATCAGTGGAt           <  1:792895/140‑1 (MQ=255)

                                                                                                                      gTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGACGAAAATTATTTATCAGTGGAt           <  1:1484106/140‑1 (MQ=255)

                                                                                                                      gTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGACGAAAATTATTTATCAGTGGAt           <  1:1487086/140‑1 (MQ=255)

                                                                                                                      gTTGGTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGACGAAAATTATTTATCAGTGGAt           <  1:466825/140‑1 (MQ=255)

                                                                                                                          gTCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGACGAAAATTATTTATCAGTGGATTTGt       <  1:1092600/140‑1 (MQ=255)

                                                                                                                           tCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGACGAAAATTATTTATCAGTGGATTTGt       >  2:1274506/1‑139 (MQ=255)

                                                                                                                           tCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGACGAAAATTATTTATCAGTGGATTTGt       <  1:1274506/139‑1 (MQ=255)

                                                                                                                           tCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGACGAAAATTATTTATCAGTGGATTTGt       <  2:69650/139‑1 (MQ=255)

                                                                                                                           tCAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGACGAAAATTATTTATCAGTGGATTTGt       >  1:69650/1‑139 (MQ=255)

                                                                                                                            cAGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGACGAAAATTATTTATCAGTGGATTTGTCt     <  1:1111850/140‑1 (MQ=255)

                                                                                                                             aGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGACGAAAATTATTTATCAGTGGATTTGTCtt    <  1:349473/140‑1 (MQ=255)

                                                                                                                             aGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGACGAAAATTATTTATCAGTGGATTTGTCtt    <  1:57487/140‑1 (MQ=255)

                                                                                                                             aGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGACGAAAATTATTTATCAGTGGATTTGTCtt    <  1:585264/140‑1 (MQ=255)

                                                                                                                             aGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGACGAAAATTATTTATCAGTGGATTTGTCtt    <  2:876607/140‑1 (MQ=255)

                                                                                                                             aGCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGACGAAAATTATTTATCAGTGGATTTGTCtt    <  2:204363/140‑1 (MQ=255)

                                                                                                                              gCAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGACGAAAATTATTTATCAGTGGATTTGTCTTa   >  1:929587/1‑140 (MQ=255)

                                                                                                                               cAAAGAGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGACGAAAATTATTTATCAGTGGATTTGTCTTAt  >  1:982964/1‑140 (MQ=255)

GCATGGCAACTGTATTATATTCTTAAAGCCAATGGATATTCACTCTTATCACTGTGAAGGTTTAGTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGCGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGACGAAAATTATTTATCAGTGGATTTGTCTTAT  >  NC_000913/3860534‑3860800

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`