Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,762,018	C→A	R508L (CGT→CTT)	abpB ←	CP4‑57 prophage; putative helicase YfjK

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,762,018	0	C	A	100.0%	230.1 / NA	64	R508L (CGT→CTT)	abpB	CP4‑57 prophage; putative helicase YfjK
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (29/35);  total (29/35)

AACCAGTCTGGCAATGATCTTTGCAAAGGTCTTGAGGAAGTTTGTCGCGGGAGTCCAGTGAAACACTAACGAGGAAAATTCGTTATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGAACTGCTCGACACGGAAGTACGAATGCTTCTTCACAAGGTCGATGGAAACACGGTCGTTTATGAAAACCTCATCAAAGCGATCCTGTGAAAACTCGGACAAGTGGTCTGGTTGAACGCTGGCTAACAGGTTGATTGGGGTATCAATGCC  >  NC_000913/2761885‑2762154                                                                                                                                      |                                                                                                                                         aaCCAGTCTGGCAATGATCTTTGCAAAGGTCTTGAGGAAGTTTGTCGCGGGAGTCCAGTGAAACACTAACGAGGAAAATTCGTTATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGt                                                                                                                                    >  1:199907/1‑140 (MQ=255)    cAGTCTGGCAATGATCTTTGCAAAGGTCTTGAGGAAGTTTGTCGCGGGAGTCCAGTGAAACACTAACGAGGAAAATTCGTTATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACg                                                                                                                                 <  2:83450/140‑1 (MQ=255)    cAGTCTGGCAATGATCTTTGCAAAGGTCTTGAGGAAGTTTGTCGCGGGAGTCCAGTGAAACACTAACGAGGAAAATTCGTTATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACg                                                                                                                                 >  2:43984/1‑140 (MQ=255)           gCAATGATCTTTGCAAAGGTCTTGAGGAAGTTTGTCGCGGGAGTCCAGTGAAACACTAACGAGGAAAATTCGTTATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAAt                                                                                                                              <  1:451137/136‑1 (MQ=255)           gCAATGATCTTTGCAAAGGTCTTGAGGAAGTTTGTCGCGGGAGTCCAGTGAAACACTAACGAGGAAAATTCGTTATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAAt                                                                                                                              >  2:451137/1‑136 (MQ=255)           gCAATGATCTTTGCAAAGGTCTTGAGGAAGTTTGTCGCGGGAGTCCAGTGAAACACTAACGAGGAAAATTCGTTATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGctt                                                                                                                          <  2:782242/140‑1 (MQ=255)           gCAATGATCTTTGCAAAGGTCTTGAGGAAGTTTGTCGCGGGAGTCCAGTGAAACACTAACGAGGAAAATTCGTTATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGctt                                                                                                                          >  1:204307/1‑140 (MQ=255)           gCAATGATCTTTGCAAAGGTCTTGAGGAAGTTTGTCGCGGGAGTCCAGTGAAACACTAACGAGGAAAATTCGTTATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGctt                                                                                                                          <  2:494367/140‑1 (MQ=255)           gCAATGATCTTTGCAAAGGTCTTGAGGAAGTTTGTCGCGGGAGTCCAGTGAAACACTAACGAGGAAAATTCGTTATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGctt                                                                                                                          <  2:428691/140‑1 (MQ=255)           gCAATGATCTTTGCAAAGGTCTTGAGGAAGTTTGTCGCGGGAGTCCAGTGAAACACTAACGAGGAAAATTCGTTATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGctt                                                                                                                          <  2:348515/140‑1 (MQ=255)           gCAATGATCTTTGCAAAGGTCTTGAGGAAGTTTGTCGCGGGAGTCCAGTGAAACACTAACGAGGAAAATTCGTTATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGctt                                                                                                                          >  1:580828/1‑140 (MQ=255)                 aTCTTTGCAAAGGTCTTGAGGAAGTTTGTCGCGGGAGTCCAGTGAAACACTAACGAGGAAAATTCGTTATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTcac                                                                                                                    >  2:559322/1‑140 (MQ=255)                     ttGCAAAGGTCTTGAGGAAGTTTGTCGCGGGAGTCCAGTGAAACACTAACGAGGAAAATTCGTTATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAgg                                                                                                                <  2:819899/140‑1 (MQ=255)                      tGCAAAGGTCTTGAGGAAGTTTGTCGCGGGAGTCCAGTGAAACACTAACGAGGAAAATTCGTTATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGt                                                                                                               <  1:43984/140‑1 (MQ=255)                         aaaGGTCTTGAGGAAGTTTGTCGCGGGAGTCCAGTGAAACACTAACGAGGAAAATTCGTTATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGTCGa                                                                                                            >  1:575542/1‑140 (MQ=255)                           aGGTCTTGAGGAAGTTTGTCGCGGGAGACCAGTGAAACACTAACGAGGGAAATTCGTTATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGACCTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGTCGATg                                                                                                          >  2:629904/1‑140 (MQ=255)                           aGGTCTTGACGAAGTTTGTCGCGGGAGTCCAGTGAAACACTAACGAGGAAAATTCGTTATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGTCGATg                                                                                                          >  1:657643/1‑140 (MQ=255)                             gTCTTGAGGAAGTTTGTCGCGGGAGTCCAGTGAAACACTAACGAGGAAAATTCGTTATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGt                                                                                                               >  2:803887/1‑133 (MQ=255)                             gTCTTGAGGAAGTTTGTCGCGGGAGTCCAGTGAAACACTAACGAGGAAAATTCGTTATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGt                                                                                                               >  2:260833/1‑133 (MQ=255)                             gTCTTGAGGAAGTTTGTCGCGGGAGTCCAGTGAAACACTAACGAGGAAAATTCGTTATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGt                                                                                                               <  1:803887/133‑1 (MQ=255)                             gTCTTGAGGAAGTTTGTCGCGGGAGTCCAGTGAAACACTAACGAGGAAAATTCGTTATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGt                                                                                                               <  1:260833/133‑1 (MQ=255)                             gTCTTGAGGAAGTTTGTCGCGGGAGTCCAGTGAAACACTAACGAGGAAAATTCGTTATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGTCGATGGa                                                                                                        >  2:197587/1‑140 (MQ=255)                                ttGAGGAAGTTTGTCGCGGGAGTCCAGTGAAACACTAACGAGGAAAATTCGTTATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGTCGATGGAAac                                                                                                     >  1:236850/1‑140 (MQ=255)                                  gAGGAAGTTTGTCGCGGGAGTCCAGTGAAACACTAACGAGGAAAATTCGTTATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAgg                                                                                                                >  2:331172/1‑127 (MQ=255)                                  gAGGAAGTTTGTCGCGGGAGTCCAGTGAAACACTAACGAGGAAAATTCGTTATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAgg                                                                                                                <  1:331172/127‑1 (MQ=255)                                        gTTTGTCGCGGGAGTCCAGTGAAACACTAACGAGGAAAATTCGTTATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGTCGATGGAAACACGGTCGt                                                                                             <  1:612074/140‑1 (MQ=255)                                          ttGTCGCGGGAGTCCAGTGAAACACTAACGAGGAAAATTCGTTATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGTCGATGGAAACACGGTCGttt                                                                                           >  1:155755/1‑140 (MQ=255)                                               gcgGGAGTCCAGTGAAACACTAACGAGGAAAATTCGTTATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGTCGATGGAAACACGGTCGTTTATGaa                                                                                      <  1:122586/140‑1 (MQ=255)                                                           tGAAACACTAACGAGGAAAATTCGTTATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGTCGATGGAAACACGGTCGTTTATGAAAACCTCATCaaa                                                                          <  2:80150/140‑1 (MQ=255)                                                            gAAACACTAACGAGGAAAATTCGTTATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGTCGATGGAAACACGGTCGTTTATGAAAACCTCATCAAAg                                                                         <  2:575542/140‑1 (MQ=255)                                                             aaaCACTAACGAGGAAAATTCGTTATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGTCGATGGAAACACGGTCGTTTATGAAAACCTCATCAAAGc                                                                        >  1:480629/1‑140 (MQ=255)                                                              aaCACTAACGAGGAAAATTCGTTATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGTCGATGGAAACACGGTCGTTTATGAAAACCTCATCAAAGCg                                                                       <  2:199907/140‑1 (MQ=255)                                                              aaCACTAACGAGGAAAATTCGTTATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGTCGATGGAAACACGGTCGTTTATGAAAACCTCATCAAAGCg                                                                       <  2:236850/140‑1 (MQ=255)                                                              aaCACTAACGAGGAAAATTCGTTATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGTCGATGGAAACACGGTCGTTTATGAAAACCTCATCAAAGCg                                                                       >  2:424433/1‑140 (MQ=255)                                                                cacTAACGAGGAAAATTCGTTATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGTCGATGGAAACACGGTCGTTTATGAAAACCTCATCAAAGCGAt                                                                     <  2:580828/140‑1 (MQ=255)                                                                   tAACGAGGAAAATTCGTTATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGTCGATGGAAACACGGTCGTTTATGAAAACCTCATCAAAGCGATCCt                                                                  >  2:153557/1‑140 (MQ=255)                                                                    aaCGAGGAAAATTCGTTATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGTCGATGGAAACACGGTCGTTTATGAAAACCTCATCAAAGCGATCCtg                                                                 >  2:389743/1‑140 (MQ=255)                                                                          gAAAATTCGTTATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGTCGATGGAAACACGGTCGTTTATGAAAACCTCATCAAAGCGATcc                                                                   >  2:599469/1‑132 (MQ=255)                                                                          gAAAATTCGTTATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGTCGATGGAAACACGGTCGTTTATGAAAACCTCATCAAAGCGATcc                                                                   <  1:599469/132‑1 (MQ=255)                                                                           aaaaTTCGTTATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGTCGATGGAAACACGGTCGTTTATGAAAACCTCATCAAAGCGATCCTGTGAAAAc                                                          >  2:227213/1‑140 (MQ=255)                                                                           aaaaTTCGTTATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGTCGATGGAAACACGGTCGTTTATGAAAACCTCATCAAAGCGATCCTGTGAAAAc                                                          >  1:287596/1‑140 (MQ=255)                                                                               ttCGTTATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGTCGATGGAAACACGGTCGTTTATGAAAACCTCATCAAAGCGATCCTGTGAAAACTCgg                                                      >  1:173071/1‑140 (MQ=255)                                                                                    tATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGTCGATGGAAACACGGTCGTTTATGAAAACCTCATCAAAGCGATCCTGTGAAAACTCGGACAAg                                                 <  1:497872/140‑1 (MQ=255)                                                                                    tATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGTCGATGGAAACACGGTCGTTTATGAAAACCTCATCAAAGCGATCCTGTGAAAACTCGGACAAg                                                 >  1:823621/1‑140 (MQ=255)                                                                                                tctcGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGTCGATGGAAACACGGTCGTTTATGAAAACCTCATCAAAGCGATCCTGTGAAAACTCGGACAAGTGGt                                             >  2:282777/1‑132 (MQ=255)                                                                                                tctcGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGTCGATGGAAACACGGTCGTTTATGAAAACCTCATCAAAGCGATCCTGTGAAAACTCGGACAAGTGGt                                             <  1:282777/132‑1 (MQ=255)                                                                                                 ctcGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGTCGATGGAAACACGGTCGTTTATGAAAACCTCATCAAAGCGATCCTGTGAAAACTCGGACAAGTGGTCTGGTTGaa                                    <  1:44073/140‑1 (MQ=255)                                                                                                 ctcGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGTCGATGGAAACACGGTCGTTTATGAAAACCTCATCAAAGCGATCCTGTGAAAACTCGGACAAGTGGTCTGGTTGaa                                    <  1:499640/140‑1 (MQ=255)                                                                                                   cGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGTCGATGGAAACACGGTCGTTTATGAAAACCTCATCAAAGCGATCCTGTGAAGACTCGGACAAGTGGTCTGGTTGAACg                                  >  1:508549/1‑140 (MQ=255)                                                                                                   cGAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGTCGATGGAAACACGGTCGTTTATGAAAACCTCATCAAAGCGATCCTGTGAAAACTCGGACAAGTGGTCTGGTTGAACg                                  <  1:197587/140‑1 (MQ=255)                                                                                                    gAACATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGTCGATGGAAACACGGTCGTTTATGAAAACCTCATCAAAGCGATCCTGTGAAAACTCGGACAAGTGGTCTGGTTGAACGc                                 <  1:227213/140‑1 (MQ=255)                                                                                                     aaCATGCTTTGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGTCGATGGAAACACGGTCGTTTATGAAAACCTCATCAAAGCGATCCTGTGAAAACTCGGACAAGTGGTCTGGTTGAACGCt                                <  1:738784/140‑1 (MQ=255)                                                                                                              tGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGTCGATGGAAACACGGTCGTTTATGAAAACCTCATCAAAGCGATCCTGTGAAAACTCGGACAAGTGGTCTGGTTGAACGCTGGCTAACAg                       >  2:239220/1‑140 (MQ=255)                                                                                                              tGCAGCATTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGTCGATGGAAACACGGTCGTTTATGAAAACCTCATCAAAGCGATCCTGTGAAAACTCGGACAAGTGGTCTGGTTGAACGCTGGCTAACAg                       <  2:480629/140‑1 (MQ=255)                                                                                                                cagcaTTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGTCGATGGAAACACGGTCGTTTATGAAAACCTCATCAAAGCGATCCTGTGAAAACTCGGACAAGTGGTCTGGTTGAACGCTGGCTAACAGGt                     >  1:161960/1‑140 (MQ=255)                                                                                                                   caTTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGTCGATGGAAACACGGTCGTTTATGAAAACCTCATCAAAGCGATCCTGTGAAAACTCGGACAAGTGGTCTGGTTGAACGCTGGCTAACAGGTTGa                  <  2:823621/140‑1 (MQ=255)                                                                                                                    aTTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGTCGATGGAAACACGGTCGTTTATGAAAACCTCATCAAAGCGATCCTGTGAAAACTCGGACAAGTGGTCTGGTTGAACGCTGGCTAACAGGTTGAt                 <  1:153557/140‑1 (MQ=255)                                                                                                                    aTTTCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGTCGATGGAAACACGGTCGTTTATGAAAACCTCATCAAAGCGATCCTGTGAAAACTCGGACAAGTGGTCTGGTTGAACGCTGGCTAACAGGTTGAt                 <  1:389743/140‑1 (MQ=255)                                                                                                                     tttCGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGTCGATGGAAACACGGACGTTTATGAAAACCTCATCAAAGCGATCCTGTGAAAACTCGGACAAGTGGTCTGGTTGAACGCTGGCTAACAGGTTGAtt                >  2:437982/1‑140 (MQ=255)                                                                                                                        cGAACTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGTCGATGGAAACACGGTCGTTTATGAAAACCTCATCAAAGCGATCCTGTGAAAACTCGGACAAGTGGTCTGGTTGAACGCTGGCTAACAGGTTGATTggg             >  2:458118/1‑140 (MQ=255)                                                                                                                            cTGCTCGACAAGGAAGTACGAATGCTTCTTCACAAGGTCGATGGAAACACGGTCGTTTATGAAAACCTCATCAAAGCGATCCTGTGAAAACTCGGACAAGTGGTCTGGTTGAACGCTGGCTAACAGGTTGATTGGGGTAt         <  1:424433/140‑1 (MQ=255)                                                                                                                                tCGACAAGGAAGTACGAATGCTTCTTCACAAGGTCGATGGAAACACGGTCGTTTATGAAAACCTCATCAAAGCGATCCTGTGAAGACTCGGACAAGTGGTCTGGTTGAACGCTGGCTAACAGGTTGATTGGGGTATCAAt     <  2:508549/140‑1 (MQ=255)                                                                                                                                tCGACAAGGAAGTACGAATGCTTCTTCACAAGGTCGATGGAAACACGGTCGTTTATGAAAACCTCATCAAAGCGATCCTGTGAAAACTCGGACAAGTGGTCTGGTTGAACGCTGGCTAACAGGTTGATTGGGGTATCAAt     <  1:494480/140‑1 (MQ=255)                                                                                                                                tCGACAAGGAAGTACGAATGCTTCTTCACAAGGTCGATGGAAACACGGTCGTTTATGAAAACCTCATCAAAGCGATCCTGTGAAAACTCGGACAAGTGGTCTGGTTGAACGCTGGCTAACAGGTTGATTGGGGTATCAAt     <  1:458118/140‑1 (MQ=255)                                                                                                                                tCGACAAGGAAGTACGAATGCTTCTTCACAAGGTCGATGGAAACACGGTCGTTTATGAAAACCTCATCAAAGCGATCCTGTGAAAACTCGGACAAGTGGTCTGGTTGAACGCTGGCTAACAGGTTGATTGGGGTATCAAt     <  1:710965/140‑1 (MQ=255)                                                                                                                                   acaaGGAAGTACGAATGCTTCTTCACAAGGTCGATGGAAACACGGTCGTTTATGAAAACCTCATCAAAGCGATCCTGTGAAAACTCGGACAAGTGGTCTGGTTGAACGCTGGCTAACAGGTTGATTGGGGTATCAATGcc  <  1:239220/140‑1 (MQ=255)                                                                                                                                      |                                                                                                                                         AACCAGTCTGGCAATGATCTTTGCAAAGGTCTTGAGGAAGTTTGTCGCGGGAGTCCAGTGAAACACTAACGAGGAAAATTCGTTATCGTCCATCATCTCGAACATGCTTTGCAGCATTTCGAACTGCTCGACACGGAAGTACGAATGCTTCTTCACAAGGTCGATGGAAACACGGTCGTTTATGAAAACCTCATCAAAGCGATCCTGTGAAAACTCGGACAAGTGGTCTGGTTGAACGCTGGCTAACAGGTTGATTGGGGTATCAATGCC  >  NC_000913/2761885‑2762154

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑