Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,453,446 G→T intergenic (‑176/+62) rpsJ ← / ← gspB 30S ribosomal subunit protein S10/putative general secretion pathway protein B

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,453,4460GT100.0% 419.9 / NA 117intergenic (‑176/+62)rpsJ/gspB30S ribosomal subunit protein S10/putative general secretion pathway protein B
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (64/53);  total (64/53)

Only 100 of 118 total aligned reads displayed.

CCTCAGACCCATTACGATTGATGGGAGAGTGTAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCGCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTATCTCTCAAGTTCGTTCAGTGCATTTTTGACACGCTCTCTTAAACCGGCTTTCTCTTCGCTTTCTTCCACA  >  NC_000913/3453313‑3453580
                                                                                                                                     |                                                                                                                                      
cctcAGACCCATTACGATTGATGGGAGAGTGTAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATtat                                                                                                                                  <  2:421434/140‑1 (MQ=255)
 ctcAGACCCATTACGATTGATGGGAGAGTGTAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATtata                                                                                                                                 <  1:676258/140‑1 (MQ=255)
   cAGACCCATTACGATTGATGGGAGAGTGTAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATtata                                                                                                                                 >  1:409832/1‑138 (MQ=255)
   cAGACCCATTACGATTGATGGGAGAGTGTAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTataca                                                                                                                               >  1:1263979/1‑140 (MQ=255)
     gACCCATTACGATTGATGGGAGAGTGTAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTatacata                                                                                                                             >  1:686404/1‑140 (MQ=255)
      aCCCATTACGATTGATGGGAGAGTGTAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATtata                                                                                                                                 <  1:1499336/135‑1 (MQ=255)
      aCCCATTACGATTGATGGGAGAGTGTAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTatacatac                                                                                                                            >  2:782042/1‑140 (MQ=255)
      aCCCATTACGATTGATGGGAGAGTGTAACCGTTCTTACGAAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATtata                                                                                                                                 >  2:1499336/1‑135 (MQ=255)
         cATTACGATTGATGGGAGAGTGTAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTa                                                                                                                         >  1:169419/1‑140 (MQ=255)
           ttACGATTGATGGGAGAGTGTAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATtat                                                                                                                                  <  2:722602/129‑1 (MQ=255)
           ttACGATTGATGGGAGAGTGTAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAac                                                                                                                       >  1:381734/1‑140 (MQ=255)
           ttACGATTGATGGGAGAGTGTAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAac                                                                                                                       >  1:1337012/1‑140 (MQ=255)
           ttACGATTGATGGGAGAGTGTAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAac                                                                                                                       >  1:1461192/1‑140 (MQ=255)
           ttACGATTGATGGGAGAGTGTAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAac                                                                                                                       >  2:535686/1‑140 (MQ=255)
             aCGATTGATGGGAGAGTGTAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAacca                                                                                                                     <  2:943099/140‑1 (MQ=255)
             aCGATTGATGGGAGAGTGTAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAacca                                                                                                                     <  1:377223/140‑1 (MQ=255)
               gATTGATGGGAGAGTGTAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAaccacc                                                                                                                   <  1:535686/140‑1 (MQ=255)
                aTTGATGGGAGAGTGTAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCg                                                                                                                  >  1:819697/1‑140 (MQ=255)
                aTTGATGGGAGAGTGTAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCg                                                                                                                  <  2:819697/140‑1 (MQ=255)
                aTTGATGGGAGAGTGTAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCg                                                                                                                  <  1:1203557/140‑1 (MQ=255)
                  tGATGGGAGAGTGTAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTa                                                                                                                         <  2:616339/131‑1 (MQ=255)
                  tGATGGGAGAGTGTAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTa                                                                                                                         >  1:616339/1‑131 (MQ=255)
                  tGATGGGAGAGTGTAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGaa                                                                                                                <  1:350621/140‑1 (MQ=255)
                    aTGGGAGAGTGTAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGaa                                                                                                                >  2:520432/1‑138 (MQ=255)
                    aTGGGAGAGTGTAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGaa                                                                                                                >  2:560668/1‑138 (MQ=255)
                    aTGGGAGAGTGTAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGaa                                                                                                                <  1:560668/138‑1 (MQ=255)
                    aTGGGAGAGTGTAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGaa                                                                                                                <  1:520432/138‑1 (MQ=255)
                    aTGGGAGAGTGTAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACg                                                                                                              >  2:1069133/1‑140 (MQ=255)
                    aTGGGAGAGTGTAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACg                                                                                                              <  2:1337012/140‑1 (MQ=255)
                    aTGGGAGAGTGTAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACg                                                                                                              <  2:1583200/140‑1 (MQ=255)
                      gggAGAGTGTAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACCGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCa                                                                                                            <  1:621278/140‑1 (MQ=255)
                         agagTGTAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGc                                                                                                         >  2:1109420/1‑140 (MQ=255)
                           agTGTAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGt                                                                                                       >  1:1225907/1‑140 (MQ=255)
                           agTGTAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGt                                                                                                       <  2:694656/140‑1 (MQ=255)
                           agTGTAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGt                                                                                                       >  1:533959/1‑140 (MQ=255)
                            gtgtAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAaccac                                                                                                                    >  2:269222/1‑126 (MQ=255)
                            gtgtAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAaccac                                                                                                                    <  1:269222/126‑1 (MQ=255)
                             tgtAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTAt                                                                                                     >  2:1641945/1‑140 (MQ=255)
                             tgtAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTAt                                                                                                     >  2:449954/1‑140 (MQ=255)
                              gtAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGATCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTAtt                                                                                                    >  1:148213/1‑140 (MQ=255)
                               tAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTg                                                                                                   >  1:1483820/1‑140 (MQ=255)
                                  ccGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCa                                                                                                            >  1:205267/1‑128 (MQ=255)
                                  ccGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTa                                                                                                <  2:381734/140‑1 (MQ=255)
                                     ttCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTagta                                                                                             <  1:1641945/140‑1 (MQ=255)
                                     ttCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTagta                                                                                             <  1:755207/140‑1 (MQ=255)
                                       cTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTagtaaa                                                                                           >  2:1490429/1‑140 (MQ=255)
                                            gTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACGGAACGCAAGCGTATTGCTAgtaaagtaaa                                                                                      <  2:1263979/140‑1 (MQ=255)
                                             tAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTagta                                                                                             <  1:1019848/132‑1 (MQ=255)
                                                cTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGc                                                                                  >  2:1469839/1‑140 (MQ=255)
                                                cTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGc                                                                                  >  1:666319/1‑140 (MQ=255)
                                                 tCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGcc                                                                                 >  2:325513/1‑140 (MQ=255)
                                                 tCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGcc                                                                                 <  1:449954/140‑1 (MQ=255)
                                                   cccGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCtt                                                                               >  2:982027/1‑140 (MQ=255)
                                                     cGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCg                                                                             >  2:1172024/1‑140 (MQ=255)
                                                      gATTGGGAGCATAGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCgg                                                                            >  1:1071378/1‑140 (MQ=255)
                                                             aGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTAtct                                                                     >  1:433249/1‑140 (MQ=255)
                                                               cATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTAtctct                                                                   <  2:433249/140‑1 (MQ=255)
                                                               cATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTAtctct                                                                   >  1:66954/1‑140 (MQ=255)
                                                                aTTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACGAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTAtctctc                                                                  >  2:1179180/1‑140 (MQ=255)
                                                                         tAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTATCTCTCAAgttcgtt                                                         >  1:100069/1‑140 (MQ=255)
                                                                           gCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACGAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTATCTCTCAAGTTCGTTCa                                                       <  2:13188/140‑1 (MQ=255)
                                                                            ccAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTATCTCTCAAgttc                                                            <  1:397086/134‑1 (MQ=255)
                                                                            ccAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTATCTCTCAAgttc                                                            >  2:397086/1‑134 (MQ=255)
                                                                            ccAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTATCTCTCAAGTTCGTTCAg                                                      >  1:927734/1‑140 (MQ=255)
                                                                            ccAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTATCTCTCAAGTTCGTTCAg                                                      >  2:569009/1‑140 (MQ=255)
                                                                            ccAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTATCTCTCAAGTTCGTTCAg                                                      >  2:487435/1‑140 (MQ=255)
                                                                            ccAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTATCTCTCAAGTTCGTTCAg                                                      >  1:329510/1‑140 (MQ=255)
                                                                            ccAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTATCTCTCAAGTTCGTTCAg                                                      >  2:866244/1‑140 (MQ=255)
                                                                            ccAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTATCTCTCAAGTTCGTTCAg                                                      >  1:598863/1‑140 (MQ=255)
                                                                                 ttCGGCTAACTGAGGTTCAGATTGAACCAGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTATCTCTCAAGTTCGTTCAGTGCAt                                                 <  1:964746/140‑1 (MQ=255)
                                                                                     gCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTATCTCTCAAGTTCGTTCAGTGCAttttt                                             >  1:1374698/1‑140 (MQ=255)
                                                                                         aCTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTATCTCTCAAGTTCGTTCAGTGCATTTTTGaca                                         <  1:1172024/140‑1 (MQ=255)
                                                                                           tGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTATCTCTCAAGTTCGTTCAGTGCATTTTTGACACg                                       <  1:569009/140‑1 (MQ=255)
                                                                                           tGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTATCTCTCAAGTTCGTTCAGTGCATTTTTGACACg                                       <  2:576848/140‑1 (MQ=255)
                                                                                            gAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTATCTCTCAAGTTCGTTCAGTGCATTTTTGACACGc                                      <  2:666319/140‑1 (MQ=255)
                                                                                              ggTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTATCTCTCAAGTTCGTTCAGTGCATTTTTGACACGctc                                    <  2:193911/140‑1 (MQ=255)
                                                                                                ttCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTATCTCTCAAGTTCGTTCAGTGCATTTTTGACACg                                       >  2:711253/1‑135 (MQ=255)
                                                                                                ttCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTATCTCTCAAGTTCGTTCAGTGCATTTTTGACACg                                       <  1:711253/135‑1 (MQ=255)
                                                                                                  cAGATTGAACCTGCTGTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTATCTCTCAAGTTCGTTCAGTGCATTTTTGACACGCTCTCtt                                >  2:78028/1‑140 (MQ=255)
                                                                                                              gctgTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTATCTCTCAAGTTCGTTCAGTGCATTTTTGACACGCTCTCTTAAAcc                           <  2:726911/133‑1 (MQ=255)
                                                                                                              gctgTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTATCTCTCAAGTTCGTTCAGTGCATTTTTGACACGCTCTCTTAAAcc                           >  1:726911/1‑133 (MQ=255)
                                                                                                               ctgTCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTATCTCTCAAGTTCGTTCAGTGCATTTTTGACACGCTCTCTTAAACCGGCTTtct                   >  2:1657739/1‑140 (MQ=255)
                                                                                                                  tCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTATCTCTCAAGTTCGTTCAGTGCATTTTTGACACGCTCTCTTAAACCGGCttt                     <  2:129237/135‑1 (MQ=255)
                                                                                                                  tCAACTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTATCTCTCAAGTTCGTTCAGTGCATTTTTGACACGCTCTCTTAAACCGGCttt                     >  1:129237/1‑135 (MQ=255)
                                                                                                                    aaCTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTATCTCTCAAGTTCGTTCAGTGCATTTTTGACACGCTCTCTTAAACCGGCTTTCTCTTCg              >  2:212156/1‑140 (MQ=255)
                                                                                                                    aaCTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTATCTCTCAAGTTCGTTCAGTGCATTTTTGACACGCTCTCTTAAACCGGCTTTCTCTTCg              <  2:148213/140‑1 (MQ=255)
                                                                                                                    aaCTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTATCTCTCAAGTTCGTTCAGTGCATTTTTGACACGCTCTCTTAAACCGGCTTTCTCTTCg              >  2:814910/1‑140 (MQ=255)
                                                                                                                    aaCTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTATCTCTCAAGTTCGTTCAGTGCATTTTTGACACGCTCTCTTAAACCGGCTTTCTCTTCg              >  1:1293909/1‑140 (MQ=255)
                                                                                                                      cTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTATCTCTCAAGTTCGTTCAGTGCATTTTTGACACGCTCTCTTAAACCGGCTTTCTCTTCGCt            <  2:1225907/140‑1 (MQ=255)
                                                                                                                      cTACGACAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTATCTCTCAAGTTCGTTCAGTGCATTTTTGACACGCTCTCTTAAACCGGCTTTCTCTTCGCt            <  2:1476480/140‑1 (MQ=255)
                                                                                                                           aCAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTATCTCTCAAGTTCGTTCAGTGCATTTTTGACACGCTCTCTTAAACCGGCTTTCTCTTCGCTttctt       <  2:1071378/140‑1 (MQ=255)
                                                                                                                            cAAGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTATCTCTCAAGTTCGTTCAGTGCATTTTTGACACGCTCTCTTAAACCGGCTTCCTCTTCGCTttcttc      >  1:1000305/1‑140 (MQ=255)
                                                                                                                              aGCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTATCTCTCAAGTTCGTTCAGTGCATTTTTGACACGCTCTCTTAAACCGGCTTTCTCTTCGCTTTCTTCca    >  2:167042/1‑140 (MQ=255)
                                                                                                                               gCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTATCTCTCAAGTTCGTTCAGTGCATTTTTGACACGCTCTCTTAAACCGGCTTTCTCTTCGCTTTCTTCcac   <  1:1469839/140‑1 (MQ=255)
                                                                                                                               gCCCGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTATCTCTCAAGTTCGTTCAGTGCATTTTTGACACGCTCTCTTAAACCGGCTTTCTCTTCGCTTTCTTCcac   <  2:1293909/140‑1 (MQ=255)
                                                                                                                                cccGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTATCTCTCAAGTTCGTTCAGTGCATTTTTGACACGCTCTCTTAAACCGGCTTTCTCTTCg              <  1:1665676/128‑1 (MQ=255)
                                                                                                                                cccGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTATCTCTCAAGTTCGTTCAGTGCATTTTTGACACGCTCTCTTAAACCGGCTTTCTCTTCg              >  2:1665676/1‑128 (MQ=255)
                                                                                                                                cccGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTATCTCTCAAGTTCGTTCAGTGCATTTTTGACACGCTCTCTTAAACCGGCTTTCTCTTCGCTTTCTTCcaca  >  1:1516771/1‑140 (MQ=255)
                                                                                                                                cccGCTCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTATCTCTCAAGTTCGTTCAGTGCATTTTTGACACGCTCTCTTAAACCGGCTTTCTCTTCGCTTTCTTCcaca  >  1:69322/1‑140 (MQ=255)
                                                                                                                                  cgctCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTATCTCTCAAGTTCGTTCAGTGCATTTTTGACACGCTCTCTTAAACCGGCTTTCTCTTCGCTttc         <  2:128409/131‑1 (MQ=255)
                                                                                                                                     |                                                                                                                                      
CCTCAGACCCATTACGATTGATGGGAGAGTGTAACCGTTCTTACGTAGCTCCCCGATTGGGAGCATTGTTAGGTAGCCAAATTCGGCTAACTGAGGTTCAGATTGAACCTGCTGTCAACTACGACAAGCCCGCGCATTATACATACTTAACCACCGAACGCAAGCGTATTGCTAGTAAAGTAAACAGCCTTCGGGTTATCTCTCAAGTTCGTTCAGTGCATTTTTGACACGCTCTCTTAAACCGGCTTTCTCTTCGCTTTCTTCCACA  >  NC_000913/3453313‑3453580

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑