| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,206,435 | 0 | C | T | 37.3% | 68.9 / 41.8 | 59 | intergenic (‑179/‑28) | ttdR/ttdA | DNA‑binding transcriptional activator Dan/L(+)‑tartrate dehydratase subunit alpha |
| Reads supporting (aligned to +/- strand): ref base C (0/37); new base T (22/0); total (22/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.12e-16 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
AAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑CCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAA > NC_000913/3206298‑3206574 | aaaaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑CCa < 2:1578624/140‑1 (MQ=255)aaaaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑CCa < 1:1572329/140‑1 (MQ=255) cATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑CCAGACa < 1:1511838/140‑1 (MQ=255) tGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑GATTTTT‑‑TCAGACaaaa > 2:1170227/1‑139 (MQ=255) ccATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑CCAGACAAATAc < 1:2055160/140‑1 (MQ=255) ttCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑TCCGACAaaaaaaaa > 1:1227620/1‑140 (MQ=255) tctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑CCAGACAAATACAAAAACTGGAg < 1:1765817/140‑1 (MQ=255) tctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AAATTTT‑‑TTAGACAAAAACAAAAAAAGGAg > 2:458689/1‑140 (MQ=255) tGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑GATTTTT‑‑TCACACCAATAAAAAAAACGGAGtt > 1:148569/1‑140 (MQ=255) tGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGAGTAATTTTT‑‑CAAAAAAAAAAAAAAAATTgaatt > 2:692923/1‑136 (MQ=255) cgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑CCAGACAAATACAAAAACTGGAGTTGcc < 2:2018546/140‑1 (MQ=255) atatTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑TCAAAAAAAAAAAAAAAATTGAGATGCCatgt > 2:1765817/1‑139 (MQ=255) atatTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑CCAGACAAATACAAAAACTGGAGTTGCCatga < 2:2627/140‑1 (MQ=255) atatTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AAATTTT‑‑TCATACAAAAACAAAAAATGGGGGTGGCatga > 2:5983/1‑140 (MQ=255) tcattcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑CCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑g < 2:1525072/140‑1 (MQ=255) tcattcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑CCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑g < 1:1734286/140‑1 (MQ=255) cattcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑GATTTTT‑‑TCACACAAAAAAAAAAAAAGGAGGTGGCATGATGA‑gg > 2:1734286/1‑139 (MQ=255) attcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑CCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCg < 1:1019133/140‑1 (MQ=255) ttcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑CCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGa < 2:1267979/140‑1 (MQ=255) ttcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑CCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGa < 1:870797/140‑1 (MQ=255) ttcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑CCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGa < 1:1340823/140‑1 (MQ=255) ttcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑CCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGa < 1:1170227/140‑1 (MQ=255) tATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑GATTTTT‑‑TTCAATAAAAACAAAAAAAGGGGATTCCATGATGA‑gaggaaaa > 1:660078/1‑133 (MQ=255) tATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑TCCGACAAAAAAAAAAAATGGAGGTGTCCTGATGG‑GTGaaaag > 1:1180743/1‑138 (MQ=255) tATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑TCAGACAAAAACAAAAAATGGAGGTGGCATGATGA‑GGGAAAga > 2:409329/1‑139 (MQ=255) tATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑TCAGAAAAAAAAAAAAAAAAGAGTTGCCATGATGA‑ggggaaaa > 2:922292/1‑133 (MQ=255) tATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑CCCAACAAATTCAAAAAAAAGAGGTGGCCTGATGA‑TGGaaaag > 2:1556712/1‑138 (MQ=255) ttttCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑TCAGACAAAAAAAAAAAATGGAGGTGGCATGATGA‑GCGaaaaaaa > 2:870797/1‑136 (MQ=255) ttttCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑TCAGACAAAAAAAAAAAAAAGAGGTGCCCAGATGA‑GCgaaagaaa > 2:1665291/1‑140 (MQ=255) tttCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATTTAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑CCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGAAAGtaat < 1:1038079/140‑1 (MQ=255) ttCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGC‑AAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑CCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGAAAGtaataa < 1:16160/140‑1 (MQ=255) tCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑GATTTTT‑‑TCATACAAAAACAAAAAATGGAGGTGGCATGATGT‑GCGAAAGgaataa > 2:1019133/1‑140 (MQ=255) gcgTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑TCAGACAAAAACAAAAACTGGAGTTGCCATGATGA‑GGGGAAGgaataaaa > 1:56668/1‑138 (MQ=255) gTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑CCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGAAAGTAATAAGCaa < 2:1098894/140‑1 (MQ=255) ttGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑CCAGACAAATTCAAAAACTGGAGTTGCCATGATGA‑GCGAAAGTAATAaacaac < 2:2163378/140‑1 (MQ=255) aTTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑CCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGAAAGTAATAAGCAACAgg < 2:852623/140‑1 (MQ=255) aTTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑CCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGAAAGTAATAAGCAACAgg < 1:409329/140‑1 (MQ=255) aTTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑CCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGAAAGTAATAAGCAACAgg < 1:922292/140‑1 (MQ=255) ttCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑CCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGAAAGTAATAAGCAACAGGc < 1:692923/140‑1 (MQ=255) ttCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑CCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGAAAGTAATAAGCAACAGGc < 1:546990/140‑1 (MQ=255) cACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑CCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGAAAGTAATAAGCAACAGGCAg < 1:157671/140‑1 (MQ=255) gTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑CCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGAAAGTAATAAGCAACAGGCAGTGAATAAg < 1:1458504/140‑1 (MQ=255) gTTAATTACATATTCACGGTGACAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑CCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGAAAGTAATAAGCAACAGGCAGTGAATAAg < 1:1817063/140‑1 (MQ=255) aaTTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑CCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTg < 1:378322/140‑1 (MQ=255) atatTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑GATTTTT‑‑TCACACCAATAAAAAAAAACGAGGTGGCCTGATGA‑GGGGAAAAAAAAAACAAAAAGCAGTGAATAAATTGAAagaa > 2:1458504/1‑139 (MQ=255) atatTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGGG‑AATTTTT‑‑TTAGACAAAAAAAAAAAATGGAGGTGGCCTGATGA‑GGGAAAGGAAAAAAAAACAGGCAGGGGAAAAATTTACagag > 2:2087317/1‑140 (MQ=255) atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑TCAAACAAAAAAAAAAAATGGAGGTGGCCTGATGA‑GGGAAAGAAATAAACAAAAAGCAGTGAATAAATTTACAgagaa > 2:1545310/1‑139 (MQ=255) atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AAATTTT‑‑TCAGACAAAAAAAAAAAATGGAGGTGGCATGATGA‑GGGAAAATAAAAAACAAAAAGCAGGGAATAAAATGACAGAGAt > 2:378322/1‑140 (MQ=255) ttCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑CCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGAtt < 1:2198657/140‑1 (MQ=255) ggTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑CCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGc < 1:183057/140‑1 (MQ=255) tGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTTCCCAAAAAAACAAAAAAACGGGA‑TTGCC‑CGATGA‑GAGGAAGTAAAAAACAAACGGCAGCGAATAAATTGACAGAGATTGTCGCTa > 2:183057/1‑140 (MQ=255) ggCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑TCAGACAAAAAAAAAAAATGGAGGTGGCATGATGA‑GGGAAAAAAATAAGAAAAAAGCAGTGAATAAGTTGACAGAGATTGTCGCTaa > 2:1555800/1‑140 (MQ=255) cAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑TCCAACAAAAAAAAAAAATTGAGTTGCCATGATGA‑GGGAAAAAAAAAAACAAAAAGCAGTGAAAAAAATGACAGAGATTGTCGCTAACt > 2:200411/1‑140 (MQ=255) aaaaTATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑CCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTa < 1:1839234/140‑1 (MQ=255) aaaaTATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑CCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTa < 1:458689/140‑1 (MQ=255) tataAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AAATTTT‑‑TCAGACAAAAAAAAAAAAAGGGGGTGGCATGATGA‑GGGGAAAAAAAAAACAAAAAGCAGGGAAAAAATTTACAGAGAATTTCGCTAAAttttaccc > 2:1839234/1‑135 (MQ=255) taAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑TCAAAAAAAAAAAAAAAATTGAGGTGGCAAGATGA‑GGGAAAAAAATAAGCAAAAAGCAGGGAATAAGGTGACAGAGAATGTTGCTAACTTTACCGccc > 2:1247011/1‑139 (MQ=255) taAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑CCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCa < 1:1545668/140‑1 (MQ=255) aaaaaCCACATTTTTAGTGGTAGTTTGTGGCGGTA‑AATTTTT‑‑CCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCa < 2:866137/139‑1 (MQ=255) aCCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑TCAGACAAAAACAAAAAATGGAGTTGGCATGATGA‑GCGAAAATAATAAACAACAAGCAGTGAATAAATTGACAGAGATTGTCGCTAAATTTTCCGCCATGAt > 2:1866877/1‑140 (MQ=255) ttAGTGGTAGTTTGTGGCGGTG‑GAATTTT‑‑TCAGAAAAAAACAAAAAAAGGAGTTGTTACAGTGG‑GGGCAAGGAATAAAAAAAACACAGGGAATAAAATTACCGAGATTTTCGCTAAATTTTTCCCCCCGATTTCTTcccc > 2:441521/1‑139 (MQ=255) ttAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑CCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCg < 1:5983/140‑1 (MQ=255) tAGTGGTAGTTTGTGCGGGTG‑AATTTTT‑‑CCAGCAAAATCCAAAAACGGGAGTTGCCATGATGA‑GAGAAAGAAGTAGCCAAAGGGGGGTGAATAAGTGGACAGAATTTGTCGCTAATTTTCCCGCCATGATTTCTACCCGa < 2:983701/140‑1 (MQ=255) gTGGTAGTTTGTGGCGGTT‑AATTTTT‑‑CCAGACAAATACAAAAGCGGGAGTTGTCTTGATGA‑GAAAAGATAATAACCAACAGGTTTTAAAAAAGTTGACAGATTTTGTCCATAATTTTACCGCCATGATTTCTACCCGAAt < 2:905924/140‑1 (MQ=255) tAGTTTGTGGCGGTG‑AATTTTT‑‑CCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCt < 1:1625853/140‑1 (MQ=255) aGTTTGTGGCGGTG‑AATTTTT‑‑TCAGACAAAAAAAAAAAATGGAGGTGGCATGATGAGGGGAAAGAAAAAAGAAAAAGCAGGGGAAAAAGTT‑ACAGAGAATTTTGCTTACTTTTCCCCCCTTATTTTTTCCCCAAAGcccg > 2:2394730/1‑138 (MQ=255) aGTTTGTGGCGGTG‑AATTTTT‑‑TCAGACAAAAAAAAAAAATGGAGGTGGCATGATGA‑GGGAAAAGAATAAAAAACAAGGAGGGAATAAAATGACAAAGATTTTCGCTAAATTTACCGCCCTGATTTTTACCCCAAAGCCtg > 2:894723/1‑140 (MQ=255) tttGTGGCGGTG‑AATTTTT‑‑TCAGACAAAAAAAAAAAATGGAGGTGCCCTGATGG‑GGGGAAGTAATAAACAAAAAGCAGTGAATAAATTGACAGAGATTGTCGCTAAATTTTACCCCATGATTTTTTCCCCAATGCCtgat > 2:1290469/1‑140 (MQ=255) ttGTGGCGGTA‑AATTTTT‑‑CCAGAAAAATAAAAAAACTGGAGTTGCCATGATGA‑GCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCtgatg < 1:509045/140‑1 (MQ=255) tgGCGGTG‑AATTTTT‑‑TCAGACAAATACAAAAAAAGGGGGTTGCATGATGA‑GCGAAAGAAAAAAACAAAAAGCAGTGAATAAATTGACAGAGATTGTCGCTAACTTTTCCGCCCTGATTTTTTCCCCAAAGCCTGATGACg > 2:2184412/1‑140 (MQ=255) gCGGTG‑AATTTTT‑‑CCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACgtg < 1:1866877/140‑1 (MQ=255) acagg‑AATTTTT‑‑CCAGAAAAAAACAAAAACTGGATTTGCAATGAGGA‑GCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAATTTTACCGCCATGATTTCTACCCGAATGCCTGATGACgtgg < 2:1465200/136‑1 (MQ=255) ggTG‑AATTTTT‑‑TCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACgtggt > 2:1074248/1‑140 (MQ=255) gTG‑AAGTTTT‑‑TCCGACAAAAACAAAAACTGGAGTTGCCCTGATGA‑GGGGAAAAAATAAACAAAAAGCAGGGAATAAGTTGACAGAGATTGTCGCTCACTTTACCGCCATGATTTTTACCCCAATGCCTGATGACgtggtg > 2:1563812/1‑140 (MQ=255) gatttttt‑‑CCAGAAAAATAAAAAAACTGGAGTTGCAATGATGA‑GCGAAAGAAATAAGCAACAGGCAGTAAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGa < 2:1653971/137‑1 (MQ=255) aaaTTTTT‑‑CCAGAAAAAAACAAAAACTGGAGTTGCCATGATGA‑GCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGa < 2:1710232/139‑1 (MQ=255) tttt‑‑CCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATaaa < 2:1227620/140‑1 (MQ=255) ccAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaa < 1:1290469/140‑1 (MQ=255) | AAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTT‑‑CCAGACAAATACAAAAACTGGAGTTGCCATGATGA‑GCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAA > NC_000913/3206298‑3206574 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |