BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,996,342	G→T	A164D (GCT→GAT)	sdiA ←	DNA‑binding transcriptional dual regulator SdiA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,996,342	0	G	T	100.0%	498.6 / NA	138	A164D (GCT→GAT)	sdiA	DNA‑binding transcriptional dual regulator SdiA
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (68/70); total (68/70)

Only 100 of 138 total aligned reads displayed.

TATTCTCAGAGATTGACAAAATCATCGCTATCTCTGCTGATGTTTTCCCTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGAGCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTATTTCGCGCGCGCTGCAACGGGAAAAGGACAAAAAGCCCAGCGCCCGGTTTGGCAGCATTAAATACTGAGTGA  >  NC_000913/1996205‑1996477

tATTCTCAGAGATTGACAAAATCATCGCTATCTCTGCTGATGTTTTCCCTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATcc                                                                                                                                       >  1:770459/1‑140 (MQ=255)

      cAGAGATTGACAAAATCATCGCTATCTCTGCTGATGTTTTCCCTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGa                                                                                                                                 <  2:1355480/140‑1 (MQ=255)

       agagATTGACAAAATCATCGCTATCTCTGCTGATGTTTTCCCTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGAc                                                                                                                                >  2:1163748/1‑140 (MQ=255)

        gagaTTGACAAAATCATCGCTATCTCTGCTGATGTTTTCCCTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACt                                                                                                                               >  1:1999333/1‑140 (MQ=255)

         agaTTGACAAAATCATCGCTATCTCTGCTGATGTTTTCCCTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACtt                                                                                                                              <  2:535189/140‑1 (MQ=255)

           aTTGACAAAATCATCGCTATCTCTGCTGATGTTTTCCCTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTc                                                                                                                            >  2:41883/1‑140 (MQ=255)

            ttGACAAAATCATCGCTATCTCTGCTGATGTTTTCCCTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTcg                                                                                                                           >  1:1041823/1‑140 (MQ=255)

            ttGACAAAATCATCGCTATCTCTGCTGATGTTTTCCCTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTcg                                                                                                                           >  2:1445052/1‑140 (MQ=255)

             tGACAAAATCATCGCTATCTCTGCTGATGTTTTCCCTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTcgc                                                                                                                          <  2:1476633/140‑1 (MQ=255)

             tGACAAAATCATCGCTATCTCTGCTGATGTTTTCCCTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTcgc                                                                                                                          >  2:238204/1‑140 (MQ=255)

              gACAAAATCATCGCTATCTCTGCTGATGTTTTCCCTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTcgcg                                                                                                                         <  2:2208402/140‑1 (MQ=255)

              gACAAAATCATCGCTATCTCTGCTGATGTTTTCCCTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTcgcg                                                                                                                         <  1:41883/140‑1 (MQ=255)

              gACAAAATCATCGCTATCTCTGCTGATGTTTTCCCTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTcgcg                                                                                                                         >  1:840770/1‑140 (MQ=255)

               aCAAAATCATCGCTATCTCTGCTGATGTTTTCCCTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCgcgc                                                                                                                        <  1:1469651/140‑1 (MQ=255)

               aCAAAATCATCGCTATCTCTGCTGATGTTTTCCCTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCgcgc                                                                                                                        <  1:138817/140‑1 (MQ=255)

               aCAAAATCATCGCTATCTCTGCTGATGTTTTCCCTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCgcgc                                                                                                                        >  2:1692284/1‑140 (MQ=255)

                 aaaaTCATCGCTATCTCTGCTGATGTTTTCCCTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCAc                                                                                                                      >  2:1324690/1‑140 (MQ=255)

                   aaTCATCGCTATCTCTGCTGATGTTTTCCCTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTcgc                                                                                                                          <  2:1101638/134‑1 (MQ=255)

                   aaTCATCGCTATCTCTGCTGATGTTTTCCCTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTcgc                                                                                                                          >  1:1101638/1‑134 (MQ=255)

                     tcatcGCTATCTCTGCTGATGTTTTCCCTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGt                                                                                                                  >  2:2032918/1‑140 (MQ=255)

                     tcatcGCTATCTCTGCTGATGTTTTCCCTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGt                                                                                                                  >  2:675226/1‑140 (MQ=255)

                      catcGCTATCTCTGCTGATGTTTTCCCTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTa                                                                                                                 <  2:2187478/140‑1 (MQ=255)

                       atcGCTATCTCTGCTGATGTTTTCCCTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTaa                                                                                                                <  2:2343134/140‑1 (MQ=255)

                         cGCTATCTCTGCTGATGTTTTCCCTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACt                                                                                                              >  1:1692744/1‑140 (MQ=255)

                              tctcTGCTGATGTTTTCCCTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCAtt                                                                                                         >  1:2341054/1‑140 (MQ=255)

                              tctcTGCTGATGTTTTCCCTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCAtt                                                                                                         >  1:1345992/1‑140 (MQ=255)

                               ctctGCTGATGTTTTCCCTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCAttt                                                                                                        >  1:1589976/1‑140 (MQ=255)

                               ctctGCTGATGTTTTCCCTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCAttt                                                                                                        >  1:1291778/1‑140 (MQ=255)

                                   gctgATGTTTTCCCTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTaa                                                                                                    >  2:465149/1‑140 (MQ=255)

                                    ctgATGTTTTCCCTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAAt                                                                                                   >  1:1812040/1‑140 (MQ=255)

                                    ctgATGTTTTCCCTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAAt                                                                                                   >  1:1956491/1‑140 (MQ=255)

                                      gATGTTTTCCCTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTg                                                                                                 <  2:1589976/140‑1 (MQ=255)

                                      gATGTTTTCCCTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTg                                                                                                 >  2:2006739/1‑140 (MQ=255)

                                      gATGTTTTCCCTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTg                                                                                                 <  1:817902/140‑1 (MQ=255)

                                      gATGTTTTCCCTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTg                                                                                                 <  1:717289/140‑1 (MQ=255)

                                      gATGTTTTCCCTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTg                                                                                                 >  1:1013378/1‑140 (MQ=255)

                                      gATGTTTTCCCTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTg                                                                                                 <  1:1966625/140‑1 (MQ=255)

                                        tGTTTTCCCTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCa                                                                                               <  1:1890188/140‑1 (MQ=255)

                                           tttCCCTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGtt                                                                                            <  2:1956491/140‑1 (MQ=255)

                                            ttCCCTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTtc                                                                                           <  2:1955158/140‑1 (MQ=255)

                                            ttCCCTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTtc                                                                                           >  1:1114044/1‑140 (MQ=255)

                                            ttCCCTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTtc                                                                                           >  1:128524/1‑140 (MQ=255)

                                            ttCCCTTCCGCCGACCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTtc                                                                                           >  1:1891205/1‑140 (MQ=255)

                                             tCCCTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTtca                                                                                          <  2:2341054/140‑1 (MQ=255)

                                               ccTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAACCGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTtcatc                                                                                        <  1:610170/140‑1 (MQ=255)

                                               ccTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTtcatc                                                                                        <  2:1013378/140‑1 (MQ=255)

                                                cTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTtcatca                                                                                       <  1:2032918/140‑1 (MQ=255)

                                                  tCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACt                                                                                     <  1:1606746/140‑1 (MQ=255)

                                                  tCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACt                                                                                     <  1:1354209/140‑1 (MQ=255)

                                                   ccgccgTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTa                                                                                    <  2:540740/140‑1 (MQ=255)

                                                    cgccgTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTaa                                                                                   >  2:2385080/1‑140 (MQ=255)

                                                       cgTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGaa                                                                                <  2:1114044/140‑1 (MQ=255)

                                                           cACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATggg                                                                            >  1:2075806/1‑140 (MQ=255)

                                                              cTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTAt                                                                         <  1:1186151/140‑1 (MQ=255)

                                                              cTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTAt                                                                         <  2:840770/140‑1 (MQ=255)

                                                                 aGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTATTTc                                                                      >  1:1611766/1‑140 (MQ=255)

                                                                    aTTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTATTTcgcg                                                                   <  1:735553/140‑1 (MQ=255)

                                                                    aTTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTATTTcgcg                                                                   <  2:770459/140‑1 (MQ=255)

                                                                     tttCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGaa                                                                                >  1:2075532/1‑126 (MQ=255)

                                                                          ttttCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTATTTCGCGCGCGCt                                                             <  2:1041823/140‑1 (MQ=255)

                                                                             tCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTATTTCGCGCGCGCTGCa                                                          <  1:2386340/140‑1 (MQ=255)

                                                                                    tGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTATTTCGCGCGCGCTGCAACGGGaa                                                   <  2:2075806/140‑1 (MQ=255)

                                                                                                 ctctGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTATTTCGCGCGCGCTGCAACGGGAAAAGGACAAAAAGc                                      <  2:1692744/140‑1 (MQ=255)

                                                                                                    tGGCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTATTTCGCGCGCGCTGCAACGGGAAAAGGACAAAAAGCCCa                                   <  1:1196066/140‑1 (MQ=255)

                                                                                                      gCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTATTTCGCGCGCGCTGCAACGGGAAAAGGACAAAAAGCCCAgc                                 >  1:2192423/1‑140 (MQ=255)

                                                                                                      gCGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTATTTCGCGCGCGCTGCAACGGGAAAAGGACAAAAAGCCCAgc                                 >  1:1266868/1‑140 (MQ=255)

                                                                                                       cGTCATCACTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTATTTCGCGCGCGCTGCAACGGGAAAAGGACAAAAAGCCCAgcg                                <  1:2385080/140‑1 (MQ=255)

                                                                                                            tcaCTATTTCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTATTTCGCGCGCGCTGCAACGGGAAAAGGACAAAAAGCCCAGCGCCCgg                           <  1:238204/140‑1 (MQ=255)

                                                                                                                   ttCATCATTTAAACGTATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTATTTCGCGCGCGCTGCAACGGGAAAAGGACAAAAAGCCCAGCGCCCGGTTTGgca                    <  2:2376553/140‑1 (MQ=255)

                                                                                                                   ttCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTATTTCGCGCGCGCTGCAACGGGAAAAGGACAAAAAGCCCAGCGCCCGGTTTGgca                    <  1:1324690/140‑1 (MQ=255)

                                                                                                                   ttCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTATTTCGCGCGCGCTGCAACGGGAAAAGGACAAAAAGCCCAGCGCCCGGTTTGgca                    >  2:2099704/1‑140 (MQ=255)

                                                                                                                   ttCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTATTTCGCGCGCGCTGCAACGGGAAAAGGACAAAAAGCCCAGCGCCCGGTTTGgca                    <  1:1445052/140‑1 (MQ=255)

                                                                                                                   ttCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTATTTCGCGCGCGCTGCAACGGGAAAAGGACAAAAAGCCCAGCGCCCGGTTTGgca                    <  1:1692284/140‑1 (MQ=255)

                                                                                                                   ttCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTATTTCGCGCGCGCTGCAACGGGAAAAGGACAAAAAGCCCAGCGCCCGGTTTGgca                    >  2:1140399/1‑140 (MQ=255)

                                                                                                                   ttCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTATTTCGCGCGCGCTGCAACGGGAAAAGGACAAAAAGCCCAGCGCCCGGTTTGgca                    <  1:656267/140‑1 (MQ=255)

                                                                                                                   ttCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTATTTCGCGCGCGCTGCAACGGGAAAAGGACAAAAAGCCCAGCGCCCGGTTTGgca                    <  1:2360288/140‑1 (MQ=255)

                                                                                                                   ttCATCATTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTATTTCGCGCGCGCTGCAACGGGAAAAGGACAAAAAGCCCAGCGCCCGGTTTGgca                    <  1:2254445/140‑1 (MQ=255)

                                                                                                                    tcatcaTTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTATTTCGCGCGCGCTGCAACGGGAAAAGGACAAAAAGCCCAGCGCCCGGTTTgg                      <  1:494134/137‑1 (MQ=255)

                                                                                                                     catcatTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTATTTCGCGCGCGCTGCAACGGGAAAAGGACAAAAAGCCCAGCGCCCGGTTTGgcagc                  >  2:208799/1‑140 (MQ=255)

                                                                                                                     catcatTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTATTTCGCGCGCGCTGCAACGGGAAAAGGACAAAAAGCCCAGCGCCCGGTTTGgca                    <  2:1764333/138‑1 (MQ=255)

                                                                                                                     catcatTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTATTTCGCGCGCGCTGCAACGGGAAAAGGACAAAAAGCCCAGCGCCCGGTTTGgca                    >  1:1764333/1‑138 (MQ=255)

                                                                                                                       tcatTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTATTTCGCGCGCGCTGCAACGGGAAAAGGACAAAAAGCCCAGCGCCCGGTTTGgca                    <  1:1009278/136‑1 (MQ=255)

                                                                                                                       tcatTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTATTTCGCGCGCGCTGCAACGGGAAAAGGACAAAAAGCCCAGCGCCCGGTTTGgca                    >  2:1009278/1‑136 (MQ=255)

                                                                                                                       tcatTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTATTTCGCGCGCGCTGCAACGGGAAAAGGACAAAAAGCCCAGCGCCCGGTTTGGCAGCAt                >  1:1783595/1‑140 (MQ=255)

                                                                                                                        catTTAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTATTTCGCGCGCGCTGCAACGGGAAAAGGACAAAAAGCCCAGCGCCCGGTTTGgcagc                  >  2:1833636/1‑137 (MQ=255)

                                                                                                                          tttAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTATTTCGCGCGCGCTGCAACGGGAAAAGGACAAAAAGCCCAGCGCCCGGTTTGgca                    >  2:220183/1‑133 (MQ=255)

                                                                                                                          tttAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTATTTCGCGCGCGCTGCAACGGGAAAAGGACAAAAAGCCCAGCGCCCGGTTTGgca                    <  1:220183/133‑1 (MQ=255)

                                                                                                                          tttAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTATTTCGCGCGCGCTGCAACGGGAAAAGGACAAAAAGCCCAGCGCCCGGTTTGGCAGCATTaa             >  2:1870783/1‑140 (MQ=255)

                                                                                                                          tttAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTATTTCGCGCGCGCTGCAACGGGAAAAGGACAAAAAGCCCAGCGCCCGGTTTGGCAGCATTaa             >  2:698103/1‑140 (MQ=255)

                                                                                                                           ttAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTATTTCGCGCGCGCTGCAACGGGAAAAGGACAAAAAGCCCAGCGCCCGGTTTGGCAGCATTaaa            <  1:1426658/140‑1 (MQ=255)

                                                                                                                           ttAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTATTTCGCGCGCGCTGCAACGGGAAAAGGACAAAAAGCCCAGCGCCCGGTTTGGCAGCATTaaa            <  2:1980094/140‑1 (MQ=255)

                                                                                                                            tAAACGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTATTTCGCGCGCGCTGCAACGGGAAAAGGACAAAAAGCCCAGCGCCCGGTTTGGCAGCATTAAAt           >  1:586285/1‑140 (MQ=255)

                                                                                                                             aaaCGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTATTTCGCGCGCGCTGCAACGGGAAAAGGACAAAAAGCCCAGCGCCCGGTTTGGCAGCATTAAATa          <  2:1291778/140‑1 (MQ=255)

                                                                                                                             aaaCGCATCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTATTTCGCGCGCGCTGCAACGGGAAAAGGACAAAAAGCCCAGCGCCCGGTTTGGCAGCATTAAATa          <  2:1266868/140‑1 (MQ=255)

                                                                                                                                    tCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTATTTCGCGCGCGCTGCAACGGGAAAAGGACAAAAAGCCCAGCGCCCGGTTTGgca                    >  1:1115393/1‑123 (MQ=255)

                                                                                                                                    tCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTATTTCGCGCGCGCTGCAACGGGAAAAGGACAAAAAGCCCAGCGCCCGGTTTGGCAGCATTAAATACTGAGTg   >  2:844023/1‑140 (MQ=255)

                                                                                                                                    tCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTATTTCGCGCGCGCTGCAACGGGAAAAGGACAAAAAGCCCAGCGCCCGGTTTGGCAGCATTAAATACTGAGTg   >  2:1601065/1‑140 (MQ=255)

                                                                                                                                    tCAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGCATTTCGCGCGCGCTGCAACGGGAAAAGGACAAAAAGCCCAGCGCCCGGTTTGGCAGCATTAAATACTGAGTg   >  2:1592238/1‑140 (MQ=255)

                                                                                                                                     cAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTATTTCGCGCGCGCTGCAACGGGAAAAGGACAAAAAGCCCAGCGCCCGGTTTGGCAGCATTAAATACTGAGTGa  >  2:368440/1‑140 (MQ=255)

                                                                                                                                     cAGATCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTATTTCGCGCGCGCTGCAACGGGAAAAGGACAAAAAGCCCAGCGCCCGGTTTGGCAGCATTAAATACTGAGTGa  >  1:1506109/1‑140 (MQ=255)

TATTCTCAGAGATTGACAAAATCATCGCTATCTCTGCTGATGTTTTCCCTTCCGCCGTCCACCTCAGAATTTCTTTTTCGCGCTTGCTGAAATTCATCTCTGGCGTCATCACTATTTCATCATTTAAACGCATCAGAGCCATCAGACTTTCGCGCACCAGTAACTGCATTTTTAATTGCAGTTCATCACTAAGAATGGGTATTTCGCGCGCGCTGCAACGGGAAAAGGACAAAAAGCCCAGCGCCCGGTTTGGCAGCATTAAATACTGAGTGA  >  NC_000913/1996205‑1996477

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`