BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,115,418	C→A	S1232I (AGC→ATC)	yghJ ←	putative lipoprotein YghJ

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,115,418	0	C	A	100.0%	519.0 / NA	148	S1232I (AGC→ATC)	yghJ	putative lipoprotein YghJ
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (76/72); total (76/72)

Only 100 of 154 total aligned reads displayed.

GATAACCCGAATGCGCATCACCGATGGAGATCTGCACATCGTTGGTGAAACGATGTTTGTGGCCCGGCAAGTTTTTATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAGCTCACCCAGCGGAGCCGGTGAGTTCAGAT  >  NC_000913/3115281‑3115553

gATAACCCGAATGCGCATCACCGATGGAGATCTGCACATCGTTGGTGAAACGATGTTTGTGGCCCGGCAAGTTTTTATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATg                                                                                                                                       >  1:1103114/1‑140 (MQ=255)

gATAACCCGAATGCGCATCACCGATGGAGATCTGCACATCGTTGGTGAAACGATGTTTGTGGCCCGGCAAGTTTTTATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATg                                                                                                                                       >  2:1935127/1‑140 (MQ=255)

gATAACCCGAATGCGCATCACCGATGGAGATCTGCACATCGTTGGTGAAACGATGTTTGTGGCCCGGCAAGTTTTTATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATg                                                                                                                                       >  1:2153459/1‑140 (MQ=255)

 aTAACCCGAATGCGCATCACCGATGGAGATCTGCACATCGTTGGTGAAACGATGTTTGTGGCCCGGCAAGTTTTTATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATgg                                                                                                                                      <  1:92491/140‑1 (MQ=255)

   aaCCCGAATGCGCATCACCGATGGAGATCTGCACATCGTTGGTGAAACGATGTTTGTGGCCCGGCAAGTTTTTATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCa                                                                                                                                    <  1:2109563/140‑1 (MQ=255)

    aCCCGAATGCGCATCACCGATGGAGATCTGCACATCGTTGGTGAAACGATGTTTGTGGCCCGGCAAGTTTTTATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCaa                                                                                                                                   <  2:1103114/140‑1 (MQ=255)

     cccGAATGCGCATCACCGATGGAGATCTGCACATCGTTGGTGAAACGATGTTTGTGGCCCGGCAAGTTTTTATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCaaa                                                                                                                                  >  1:829790/1‑140 (MQ=255)

     cccGAATGCGCATCACCGATGGAGATCTGCACATCGTTGGTGAAACGATGTTTGTGGCCCGGCAAGTTTTTATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCaa                                                                                                                                   >  1:287177/1‑139 (MQ=255)

     cccGAATGCGCATCACCGATGGAGATCTGCACATCGTTGGTGAAACGATGTTTGTGGCCCGGCAAGTTTTTATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCaa                                                                                                                                   <  2:287177/139‑1 (MQ=255)

        gAATGCGCATCACCGATGGAGATCTGCACATCGTTGGTGAAACGATGTTTGTGGCCCGGCAAGTTTTTATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGt                                                                                                                               >  1:1920020/1‑140 (MQ=255)

         aaTGCGCATCACCGATGGAGATCTGCACATCGTTGGTGAAACGATGTTTGTGGCCCGGCAAGTTTTTATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATgg                                                                                                                                      <  2:2258215/132‑1 (MQ=255)

             cgcATCACCGATGGAGATCTGCACATCGTTGGTGAAACGATGTTTGTGGCCCGGCAAGTTTTTATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAg                                                                                                                                 <  1:104210/133‑1 (MQ=255)

             cgcATCACCGATGGAGATCTGCACATCGTTGGTGAAACGATGTTTGTGGCCCGGCAAGTTTTTATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAg                                                                                                                                 >  2:104210/1‑133 (MQ=255)

                aTCACCGATGGAGATCTGCACATCGTTGGTGAAACGATGTTTGTGGCCCGGTAAGTTTTTATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATgg                                                                                                                                      <  2:820738/125‑1 (MQ=255)

                aTCACCGATGGAGATCTGCACATCGTTGGTGAAACGATGTTTGTGGCCCGGCAAGTTTTTATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGAt                                                                                                                       <  1:160220/140‑1 (MQ=255)

                aTCACCGATGGAGATCTGCACATCGTTGGTGAAACGATGTTTGTGGCCCGGCAAGTTTTTATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGAt                                                                                                                       >  1:57168/1‑140 (MQ=255)

                         ggAGATCTGCGCATCGTTGGTGAAACGATGTTTGTGGCTCGTCAAGTTTTTATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACAGCCGGAGAAGACATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGa                                                                                                              <  2:591093/140‑1 (MQ=255)

                          gagaTCTGCACATCGTTGGTGAAACGATGTTTGTGGCCCGGCAAGTTTTTATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGaa                                                                                                             <  1:2101290/140‑1 (MQ=255)

                               cTGCACATCGTTGGTGAAACGATGTTTGTGGCCCGGCAAGTTTTTATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCt                                                                                                        >  1:1954461/1‑140 (MQ=255)

                                 gCACATCGTTGGTGAAACGATGTTTGTGGCCCGGCAAGTTTTTATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCg                                                                                                                     >  2:1980459/1‑125 (MQ=255)

                                  cacaTCGTTGGTGAAACGATGTTTGTGGCCCGGCAAGTTTTTATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCa                                                                                                     >  1:1269393/1‑140 (MQ=255)

                                  cacaTCGTTGGTGAAACGATGTTTGTGGCCCGGCAAGTTTTTATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCa                                                                                                     >  2:555268/1‑140 (MQ=255)

                                     aTCGTTGGTGAAACGATGTTTGTGGCCCGGCAAGTTTTTATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTc                                                                                                  >  1:2267219/1‑140 (MQ=255)

                                      tCGTTGGTGAAACGATGTTTGTGGCCCGGCAAGTTTTTATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTcc                                                                                                 >  2:1508881/1‑140 (MQ=255)

                                       cGTTGGTGAAACGATGTTTGTGGCCCGGCAAGTTTTTATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTa                                                                                                                  >  2:1540526/1‑122 (MQ=255)

                                       cGTTGGTGAAACGATGTTTGTGGCCCGGCAAGTTTTTATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTa                                                                                                                  <  1:1540526/122‑1 (MQ=255)

                                       cGTTGGTGAAACGATGTTTGTGGCCCGGCAAGTTTTTATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCg                                                                                                >  2:1489255/1‑140 (MQ=255)

                                       cGTTGGTGAAACGATGTTTGTGGCCCGGCAAGTTTTTATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCg                                                                                                <  2:497043/140‑1 (MQ=255)

                                        gTTGGTGAAACGATGTTTGTGGCCCGGCAAGTTTTTATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGc                                                                                               >  1:959213/1‑140 (MQ=255)

                                         ttGGTGAAACGATGTTTGTGGCCCGGCAAGTTTTTATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGcc                                                                                              <  2:2153459/140‑1 (MQ=255)

                                         ttGGTGAAACGATGTTTGTGGCCCGGCAAGTTTTTATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGGATCCCGATCGTTAGCGAATTGCTCCAGTCCGcc                                                                                              >  1:1150552/1‑140 (MQ=255)

                                                 aCGATGTTTGTGGCCCGGCAAGTTTTTATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAAt                                                                                      >  1:2251277/1‑140 (MQ=255)

                                                 aCGATGTTTGTGGCCCGGCAAGTTTTTATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAAt                                                                                      >  2:765954/1‑140 (MQ=255)

                                                 aCGATGTTTGTGGCCCGGCAAGTTTTTATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAAt                                                                                      >  2:2309176/1‑140 (MQ=255)

                                                 aCGATGTTTGTGGCCCGGCAAGTTTTTATAGGTAAACATCCGGGGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAAt                                                                                      >  1:1411247/1‑140 (MQ=255)

                                                          gtgGCCCGGCAAGTTTTTATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCAt                                                                             <  2:63684/140‑1 (MQ=255)

                                                               ccGGCAAGTTTTTATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAgg                                                                        >  2:44340/1‑140 (MQ=255)

                                                               ccGGCAAGTTTTTATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAgg                                                                        <  1:555268/140‑1 (MQ=255)

                                                                 ggCAAGTTTTTATAGGTAAACATGCGGGGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTTATTCCTCGAGATGGCAAAGGGATGCAGATCCTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAgggt                                                                      >  2:2041035/1‑138 (MQ=255)

                                                                 ggCAAGTTTTTATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCa                                                                              <  2:1671996/132‑1 (MQ=255)

                                                                 ggCAAGTTTTTATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCAt                                                                             >  1:1152902/1‑133 (MQ=255)

                                                                 ggCAAGTTTTTATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCAt                                                                             <  2:1152902/133‑1 (MQ=255)

                                                                 ggCAAGTTTTTATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGtt                                                                      >  1:2049124/1‑140 (MQ=255)

                                                                 ggCAAGTTTTTATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGtt                                                                      <  2:1954461/140‑1 (MQ=255)

                                                                 ggCAAGTTTTTATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGtt                                                                      <  1:1508881/140‑1 (MQ=255)

                                                                       tttttATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGttcttctt                                                                <  2:1920020/140‑1 (MQ=255)

                                                                         tttATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCg                                                              <  2:2251277/140‑1 (MQ=255)

                                                                           tataGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGgt                                                            <  2:2267219/140‑1 (MQ=255)

                                                                           tataGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGgt                                                            <  1:1489255/140‑1 (MQ=255)

                                                                           tataGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGgt                                                            <  2:730370/140‑1 (MQ=255)

                                                                            ataGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGgtg                                                           <  2:959213/140‑1 (MQ=255)

                                                                            ataGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGgtg                                                           <  2:1344095/140‑1 (MQ=255)

                                                                                gTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTTTAATTGCTGGCATTCAGGTTCTTCTTCGgtg                                                           >  2:1366218/1‑136 (MQ=255)

                                                                                gTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTTTAATTGCTGGCATTCAGGTTCTTCTTCGgtg                                                           <  1:1366218/136‑1 (MQ=255)

                                                                                gTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGgt                                                            <  2:891207/135‑1 (MQ=255)

                                                                                gTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGgt                                                            >  1:891207/1‑135 (MQ=255)

                                                                                gTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGt                                                       >  1:2362624/1‑140 (MQ=255)

                                                                                gTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGt                                                       >  2:1967960/1‑140 (MQ=255)

                                                                                 tAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGgtg                                                           <  1:1834323/135‑1 (MQ=255)

                                                                                 tAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGgtg                                                           >  2:1834323/1‑135 (MQ=255)

                                                                                  aaaCATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGtat                                                     >  2:2235052/1‑140 (MQ=255)

                                                                                   aaCATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGtata                                                    >  1:1898745/1‑140 (MQ=255)

                                                                                   aaCATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGtata                                                    >  1:2234749/1‑140 (MQ=255)

                                                                                   aaCATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGtata                                                    >  2:2104817/1‑140 (MQ=255)

                                                                                           gTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAGGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAg                                            >  2:464113/1‑140 (MQ=255)

                                                                                           gTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGta                                                      >  1:1326965/1‑130 (MQ=255)

                                                                                           gTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGta                                                      <  2:1326965/130‑1 (MQ=255)

                                                                                           gTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAg                                            >  2:1720036/1‑140 (MQ=255)

                                                                                              cTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGta                                                      <  1:738452/127‑1 (MQ=255)

                                                                                              cTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGta                                                      >  2:738452/1‑127 (MQ=255)

                                                                                              cTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGt                                         <  2:1898745/140‑1 (MQ=255)

                                                                                                tACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGt                                         >  2:1596306/1‑138 (MQ=255)

                                                                                                tACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCt                                       >  2:162620/1‑140 (MQ=255)

                                                                                                 aCCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTg                                      >  1:492003/1‑140 (MQ=255)

                                                                                                   cGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGAt                                    <  2:1411247/140‑1 (MQ=255)

                                                                                                    gTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGAtt                                   >  1:782595/1‑140 (MQ=255)

                                                                                                    gTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGAtt                                   <  1:1967960/140‑1 (MQ=255)

                                                                                                      cTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTcc                                 >  1:2022640/1‑140 (MQ=255)

                                                                                                        tCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAg                               >  2:2392119/1‑140 (MQ=255)

                                                                                                        tCGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAg                               >  2:2072895/1‑140 (MQ=255)

                                                                                                         cGCTATCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAGc                              >  1:1717932/1‑140 (MQ=255)

                                                                                                         cGCTAGCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAGc                              >  2:1818180/1‑140 (MQ=255)

                                                                                                             aTCACGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAGCTCAc                          <  1:765954/140‑1 (MQ=255)

                                                                                                                 cGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAGCTCACCCAg                      <  2:1767068/140‑1 (MQ=255)

                                                                                                                 cGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAGCTCACCCAg                      <  2:2022640/140‑1 (MQ=255)

                                                                                                                 cGGCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAGCTCACCCAg                      <  2:1717932/140‑1 (MQ=255)

                                                                                                                   gCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAGCTCAccc                        >  1:763944/1‑136 (MQ=255)

                                                                                                                   gCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAGCTCAccc                        <  2:763944/136‑1 (MQ=255)

                                                                                                                   gCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAGCTCACCCAGCg                    >  1:1592323/1‑140 (MQ=255)

                                                                                                                   gCCGTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAGCTCACCCAGCg                    >  2:887112/1‑140 (MQ=255)

                                                                                                                      gTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGTGTCTGATTCCAGCTCACCCAGCGGAg                 >  2:507319/1‑140 (MQ=255)

                                                                                                                      gTAGAAGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAGCTCACCCAGCGGAg                 <  1:2264858/140‑1 (MQ=255)

                                                                                                                         gAAGTCATTCATCGAGATGGCAAGGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAGCTCACCCAGCGGAGCCg              <  1:464113/140‑1 (MQ=255)

                                                                                                                           aGTCATTCATCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAGCTCACCCAGCGGAGCCGGt            <  1:384445/140‑1 (MQ=255)

                                                                                                                              cattcatCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAGCTCACCCAGCGGAg                 <  2:793398/132‑1 (MQ=255)

                                                                                                                              cattcatCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAGCTCACCCAGCGGAg                 >  1:793398/1‑132 (MQ=255)

                                                                                                                              cattcatCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAGCTCACCCAGCGGAGCCGGTGAg         >  1:2388063/1‑140 (MQ=255)

                                                                                                                                  catCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAGCTCACCCAGCGGAGCCGGTGAGTTCa     <  1:1720036/140‑1 (MQ=255)

                                                                                                                                    tCGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAGCTCACCCAGCGGAGCCGGTGAGTTCAGa   <  1:1818180/140‑1 (MQ=255)

                                                                                                                                     cGAGATGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAGCTCACCCAGCGGAGCCGGTGAGTTCAGAt  >  2:223476/1‑140 (MQ=255)

GATAACCCGAATGCGCATCACCGATGGAGATCTGCACATCGTTGGTGAAACGATGTTTGTGGCCCGGCAAGTTTTTATAGGTAAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAGCTCACCCAGCGGAGCCGGTGAGTTCAGAT  >  NC_000913/3115281‑3115553

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`