Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	511,334	G→T	H16N (CAC→AAC)  H16N (CAC→AAC)	copA ← copA ←	Cu(+) exporting P‑type ATPase Cu(+) exporting P‑type ATPase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	511,334	0	G	T	100.0%	352.5 / NA	99	H16N (CAC→AAC)  H16N (CAC→AAC)	copA copA	Cu(+) exporting P‑type ATPase Cu(+) exporting P‑type ATPase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (42/57);  total (42/57)

ATAACCCGCTTGTTTGATGGTTTCGATCAGCTGTTCTGCACTGGCAGTCCCGGTAACGTGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTGACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCTGTGATAAAGGTTAAACCTTCCAGCAAGGGGAAGGTCAAGAAATTAATAAACCAGGC  >  NC_000913/511197‑511467                                                                                                                                          |                                                                                                                                      aTAACCCGCTTGTTTGATGGTTTCGATCAGCTGTTCTGCACTGGCAGTCCCGGTAACGTGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTAc                                                                                                                                     >  2:1539559/1‑140 (MQ=255)  tAACCCGCTTGTTTGATGGTTTCGATCAGCTGTTCTGCACTGGCAGTCCCGGTAACGTGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTAcc                                                                                                                                    <  1:1358018/140‑1 (MQ=255)   aaCCCGCTTGTTTGATGGTTTCGATCAGCTGTTCTGCACTGGCAGTCCCGGTAACGTGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCg                                                                                                                                   <  2:292581/140‑1 (MQ=255)    aCCCGCTTGTTTGATGGTTTCGATCAGCTGTTCTGCACTGGCAGTCCCGGTAACGTGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGc                                                                                                                                  <  1:1019094/140‑1 (MQ=255)        gCTTGTTTGATGGTTTCGATCAGCTGTTCTGCACTGGCAGTCCCGGTAACGTGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGa                                                                                                                              <  1:1081397/140‑1 (MQ=255)         cTTGTTTGATGGTTTCGATCAGCTGTTCTGCACTGGCAGTCCCGGTAACGTGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGAc                                                                                                                             >  1:1335145/1‑140 (MQ=255)           tGTTTGATGGTTTCGATCAGCTGTTCTGCACTGGCAGTCCCGGTAACGTGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAg                                                                                                                           <  1:1422826/140‑1 (MQ=255)             tttGATGGTTTCGATCAGCTGTTCTGCACTGGCAGTCCCGGTAACGTGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGc                                                                                                                         <  2:1822550/140‑1 (MQ=255)                gATGGTATCGATCAGCTGTTCTGCACTGGCAGTCCCGGTAACGTGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGt                                                                                                                      >  1:594378/1‑140 (MQ=255)                  tGGTTTCGATCAGCTGTTCTGCACTGGCAGTCCCGGTAACGTGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTcc                                                                                                                    <  2:1335145/140‑1 (MQ=255)                     tttCGATCAGCTGTTCTGCACTGGCAGTCCCGGTAACGTGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAgg                                                                                                                 <  1:415061/140‑1 (MQ=255)                       tCGATCAGCTGTTCTGCACTGGCAGTCCCGGTAACGTGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGt                                                                                                               <  1:790603/140‑1 (MQ=255)                       tCGATCAGCTGTTCTGCACTGGCAGTCCCGGTAACGTGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGt                                                                                                               >  1:1804186/1‑140 (MQ=255)                       tCGATCAGCTGTTCTGCACTGGCAGTCCCGGTAACGTGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGt                                                                                                               <  1:169421/140‑1 (MQ=255)                       tCGATCAGCTGTTCTGCACTGGCAGTCCCGGTAACGTGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGt                                                                                                               >  2:1888582/1‑140 (MQ=255)                       tCGATCAGCTGTTCTGCACTGGCAGTCCCGGTAACGTGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGt                                                                                                               >  1:1015029/1‑140 (MQ=255)                         gATCAGCTGTTCTGCACTGGCAGTCCCGGTAACGTGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCa                                                                                                             <  2:2723/140‑1 (MQ=255)                           tCAGCTGTTCTGCACTGGCAGTCCCGGTAACGTGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAgg                                                                                                           <  2:714331/140‑1 (MQ=255)                              gCTGTTCTGCACTGGCAGTCCCGGTAACGTGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAgg                                                                                                                          >  2:605685/1‑122 (MQ=255)                              gCTGTTCTGCACTGGCAGTCCCGGTAACGTGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAgg                                                                                                                          <  1:605685/122‑1 (MQ=255)                              gCTGTTCTGCACTGGCAGTCCCGGTAACGTGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCg                                                                                                        >  1:988522/1‑140 (MQ=255)                               cTGTTCTGCACTGGCAGTCCCGGTAACGTGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGa                                                                                                       <  1:420373/140‑1 (MQ=255)                                  ttCTGCACTGGCAGTCCCGGTAACGTGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAg                                                                                                    >  1:1182390/1‑140 (MQ=255)                                   tCTGCACTGGCAGTCCCGGTAACGTGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGt                                                                                                   >  2:600042/1‑140 (MQ=255)                                     tGCACTGGCAGTCCCGGTAACGTGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGttt                                                                                                 >  2:1053647/1‑140 (MQ=255)                                      gCACTGGCAGTCCCGGTAACGTGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTtg                                                                                                <  1:791441/140‑1 (MQ=255)                                      gCACTGGCAGTCCCGGTAACGTGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTtg                                                                                                <  1:358780/140‑1 (MQ=255)                                       cACTGGCAGTCCCGGTAACGTGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTtgt                                                                                               >  1:519750/1‑140 (MQ=255)                                         cTGGCAGTCCCGGTAACGTGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGa                                                                                             >  2:1240578/1‑140 (MQ=255)                                          tGGCAGTCCCGGTAACGTGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGAc                                                                                            <  2:1489902/140‑1 (MQ=255)                                          tGGCAGTCCCGGTAACGTGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGAc                                                                                            <  2:362132/140‑1 (MQ=255)                                           ggCAGTCCCGGTAACGTGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACa                                                                                           <  2:879004/140‑1 (MQ=255)                                            gCAGTCCCGGTAACGTGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACAt                                                                                          >  1:1949939/1‑140 (MQ=255)                                                   cGGTAACGTGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAacac                                                                                   <  1:1900648/140‑1 (MQ=255)                                                   cGGTAACGTGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAacac                                                                                   <  1:1824407/140‑1 (MQ=255)                                                   cGGTAACGTGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAacac                                                                                   <  1:1539559/140‑1 (MQ=255)                                                   cGGTAACGTGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAacac                                                                                   <  1:515298/140‑1 (MQ=255)                                                   cGGTAACGTGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAacac                                                                                   <  1:1118299/140‑1 (MQ=255)                                                     gTAACGTGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTc                                                                                 >  1:683190/1‑140 (MQ=255)                                                      tAACGTGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTcc                                                                                >  2:1230444/1‑140 (MQ=255)                                                        aCGTGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCtt                                                                              <  1:600042/140‑1 (MQ=255)                                                           tGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATaaaa                                                                                      >  1:916936/1‑129 (MQ=255)                                                           tGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATaaaa                                                                                      <  2:916936/129‑1 (MQ=255)                                                           tGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAacac                                                                                   >  2:892077/1‑132 (MQ=255)                                                           tGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAacac                                                                                   <  1:892077/132‑1 (MQ=255)                                                            gcgcTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAg                                                                          <  2:1887395/140‑1 (MQ=255)                                                             cgcTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGa                                                                         <  1:1230444/140‑1 (MQ=255)                                                               cTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAg                                                                          <  2:1754255/137‑1 (MQ=255)                                                               cTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAg                                                                          >  1:1754255/1‑137 (MQ=255)                                                               cTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACa                                                                       >  2:1722339/1‑140 (MQ=255)                                                                      gATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGa                                                                <  2:1182390/140‑1 (MQ=255)                                                                          gACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTgg                                                            <  2:594378/140‑1 (MQ=255)                                                                           acacATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGc                                                           <  1:1053647/140‑1 (MQ=255)                                                                           acacATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGc                                                           <  2:1949939/140‑1 (MQ=255)                                                                               aTCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCtgtg                                                       >  1:1631458/1‑140 (MQ=255)                                                                               aTCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCtgtg                                                       >  1:476599/1‑140 (MQ=255)                                                                               aTCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCtgtg                                                       >  1:1671623/1‑140 (MQ=255)                                                                               aTCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCtgtg                                                       >  1:1710177/1‑140 (MQ=255)                                                                               aTCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCtgtg                                                       >  2:306005/1‑140 (MQ=255)                                                                               aTCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCt                                                          >  2:1963742/1‑137 (MQ=255)                                                                               aTCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCt                                                          <  1:1963742/137‑1 (MQ=255)                                                                                 ccGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCTGTGAt                                                     >  1:1950355/1‑140 (MQ=255)                                                                                 ccGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCTGTGAt                                                     <  1:1240578/140‑1 (MQ=255)                                                                                  cGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCTGTGGTa                                                    <  1:1888582/140‑1 (MQ=255)                                                                                  cGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCTGTGATa                                                    <  2:1804186/140‑1 (MQ=255)                                                                                    ccTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCTGTGATaaa                                                  >  1:1103243/1‑140 (MQ=255)                                                                                    ccTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCTGTGATaaa                                                  >  2:1156821/1‑140 (MQ=255)                                                                                     cTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCTGTGATa                                                    <  2:1389978/137‑1 (MQ=255)                                                                                     cTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCTGTGATa                                                    >  1:1389978/1‑137 (MQ=255)                                                                                       gCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCTGTGATAAAGGt                                               >  2:866225/1‑140 (MQ=255)                                                                                         tCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCTGTGATAAAGGTTa                                             >  1:484659/1‑140 (MQ=255)                                                                                           aaCATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCTGTGATAAAGGTTaaa                                           <  2:1671623/140‑1 (MQ=255)                                                                                              aTCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCTGTGATAAAGGTTAAACCt                                        <  2:1631458/140‑1 (MQ=255)                                                                                               tCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCTGTGATAAAGGTTAAACCtt                                       >  2:503865/1‑140 (MQ=255)                                                                                                ccGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCTGTGATAAAGGTTAAACCTTc                                      <  1:866225/140‑1 (MQ=255)                                                                                                ccGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCTGTGATAAAGGTTAAACCTTc                                      <  2:519750/140‑1 (MQ=255)                                                                                                ccGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCTGTGATAAAGGTTAAACCTTc                                      <  2:1015029/140‑1 (MQ=255)                                                                                                   gACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCTGTGATAAAGGtt                                              >  1:1236872/1‑129 (MQ=255)                                                                                                   gACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCTGTGATAAAGGtt                                              <  2:1236872/129‑1 (MQ=255)                                                                                                    aCGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCTGTGATAAAGGTTAAACCTTCCAGc                                  <  2:1103243/140‑1 (MQ=255)                                                                                                          ttCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCTGTGATAAAGGTTAAACCTTCCAGCAAgggg                            >  2:1608488/1‑140 (MQ=255)                                                                                                           tCAAGACTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCTGTGATAAAGGTTAAACCTTCCAGCAAGGGGa                           <  2:476599/140‑1 (MQ=255)                                                                                                                aCTTTCTTTCACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCTGTGATAAAGGTTAAACCTTCCAGCAAGGGGAAGGTc                      <  1:1722339/140‑1 (MQ=255)                                                                                                                  tttctttcACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCTGTGATAAAGGTTAAACCTTCCAGCAAGGGGAAGGTCaa                    >  2:851034/1‑140 (MQ=255)                                                                                                                  tttctttcACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCTGTGATAAAGGTTAAACCTTCCAGCAAGGGGAAGGTCaa                    >  2:1359554/1‑140 (MQ=255)                                                                                                                    tctttcACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCTGTGATAAAGGTTAAACCTTCCAGCa                                 >  1:1366083/1‑125 (MQ=255)                                                                                                                    tctttcACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCTGTGATAAAGGTTAAACCTTCCAGCa                                 <  2:1366083/125‑1 (MQ=255)                                                                                                                    tctttcACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCTGTGATAAAGGTTAAACCTTCCAGCAAGGGGa                           <  2:1662536/131‑1 (MQ=255)                                                                                                                    tctttcACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCTGTGATAAAGGTTAAACCTTCCAGCAAGGGGa                           >  1:1662536/1‑131 (MQ=255)                                                                                                                    tctttcACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCTGTGATAAAGGTTAAACCTTCCAGCAAGGGGAAGGTCAAgc                  >  1:966859/1‑139 (MQ=255)                                                                                                                    tctttcACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCTGTGATAAAGGTTAAACCTTCCAGCAAGGGGAAGGTCAAGa                  <  1:964942/140‑1 (MQ=255)                                                                                                                    tctttcACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCTGTGATAAAGGTTAAACCTTCCAGCAAGGGGAAGGTCAAGa                  >  2:774950/1‑140 (MQ=255)                                                                                                                    tctttcACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCTGTGATAAAGGTTAAACCTTCCAGCAAGGGGAAGGTCAAGa                  >  1:271092/1‑140 (MQ=255)                                                                                                                     ctttcACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCTGTGATAAAGGTTAAACCTTCCAGCAAGGGGAAGGTCAAGaa                 <  1:851034/140‑1 (MQ=255)                                                                                                                     ctttcACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCTGTGATAAAGGTTAAACCTTCCAGCAAGGGGAAGGTCAAGaa                 <  2:624327/140‑1 (MQ=255)                                                                                                                     ctttcACGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCTGTGATAAAGGTTAAACCTTCCAGCAAGGGGAAGGTCAAGaa                 <  1:1608488/140‑1 (MQ=255)                                                                                                                          aCGCGTTTAACGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCTGTGATAAAGGTTAAACCTTCCAGCAAGGGGAAGGTCAAGAAATtaa            <  2:1950355/140‑1 (MQ=255)                                                                                                                                    cGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCTGTGATAAAGGTTAAACCTTCCAGCAAGGGGAAGGTCAAGAAATTAATAAACCAGGc  <  2:484659/140‑1 (MQ=255)                                                                                                                                    cGCAGTTACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCTGTGATAAAGGTTAAACCTTCCAGCAAGGGGAAGGTCAAGAAATTAATAAACCAGGc  <  1:935723/140‑1 (MQ=255)                                                                                                                                          |                                                                                                                                      ATAACCCGCTTGTTTGATGGTTTCGATCAGCTGTTCTGCACTGGCAGTCCCGGTAACGTGCGCTTCAGTGATAGACACATCCGCCTGCTCAACATCCGGACGCTGTTCAAGACTTTCTTTCACGCGTTTAACGCAGTGACCGCAGGACAGGCCGTCCAGGGTCAGGTCGATAGTTTGTGACATAAAACACTCCTTTAAGACAGTTTTGACTGGCTGTGATAAAGGTTAAACCTTCCAGCAAGGGGAAGGTCAAGAAATTAATAAACCAGGC  >  NC_000913/511197‑511467

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑