Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,441,752	A→T	I116N (ATC→AAC)	rpsK ←	30S ribosomal subunit protein S11

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,441,752	0	A	T	100.0%	263.1 / NA	75	I116N (ATC→AAC)	rpsK	30S ribosomal subunit protein S11
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base T (28/47);  total (28/47)

ATAAGTCGGTGCCCTCACGACGGCTCAGCTTGAGCTTAGGACCCAAATATCTTGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGATCGGAGTCACATCAGTAATGTTAGTGATGCGGAAACCTGCGGCGTTCAGAGCACGAATAGTAGATTCGCGGCCTGGACCCGGACCTTTAACCATAACTTCCAGATTCTTGATGCCGTATTCTTTCACGGCGTC  >  NC_000913/3441618‑3441885                                                                                                                                       |                                                                                                                                      aTAAGTCGGTGCCCTCACGACGGCTCAGCTTGAGCTTAGGACCCAAATATCTTGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGa                                                                                                                                  <  1:1157769/140‑1 (MQ=255) aTAAGTCGGTGCCCTCACGACGGCTCAGCTTGAGCTTAGGACCCAAATATCTTGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGa                                                                                                                                  <  2:504056/140‑1 (MQ=255) aTAAGTCGGTGCCCTCACGACGGCTCAGCTTGAGCTTAGGACCCAAATATCTTGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGa                                                                                                                                  <  1:1458247/140‑1 (MQ=255)  tAAGTCGGTGCCCTCACGACGGCTCAGCTTGAGCTTAGGACCCAAATATCTTGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAg                                                                                                                                 >  1:695960/1‑140 (MQ=255)  tAAGTCGGTGCCCTCACGACGGCTCAGCTTCAGCTTAGGACCCAAATATCTTGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAg                                                                                                                                 >  2:474563/1‑140 (MQ=255)   aaGTCGGTGCCCTCACGACGGCTCAGCTTGAGCTTAGGACCCAAATATCTTGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGATGACAACCGTTATGAGGGTTCGGAGt                                                                                                                                <  2:141043/140‑1 (MQ=255)   aaGTCGGTGCCCTCACGACGGCTCAGCTTGAGCTTAGGACCCAAATATCTTGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGt                                                                                                                                <  2:954907/140‑1 (MQ=255)   aaGTCGGTGCCCTCACGACGGCTCAGCTTGAGCTTAGGACCCAAATATCTTGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGt                                                                                                                                <  1:698045/140‑1 (MQ=255)   aaGTCGGTGCCCTCACGACGGCTCAGCTTGAGCTTAGGACCCAAATATCTTGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGt                                                                                                                                <  1:288547/140‑1 (MQ=255)    aGTCGGTGCCCTCACGACGGCTCAGCTTGAGCTTAGGACCCAAATATCTTGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTc                                                                                                                               >  2:347924/1‑140 (MQ=255)     gTCGGTGCCCTCACGACGGCTCAGCTTGAGCTTAGGACCCAAATATCTTGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGAGAACCGTTATGAGGGTTCGGAGTca                                                                                                                              <  2:398528/140‑1 (MQ=255)     gTCGGTGCCCTCACGACGGCTCAGCTTGAGCTTAGGACCCAAATATCTTGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTca                                                                                                                              <  2:340206/140‑1 (MQ=255)     gTCGGTGCCCTCACGACGGCTCAGCTTCAGCTTAGGACCCAAATATCTTGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTca                                                                                                                              <  1:474563/140‑1 (MQ=255)       cGGTGCCCTCACGACGGCTCAGCTTGAGCTTAGGACCCAAATATCTTGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTcaca                                                                                                                            <  1:232737/140‑1 (MQ=255)         gTGCCCTCACGACGGCTCGGCTTGAGCTTAGGACCCAAATATCTTGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATc                                                                                                                          <  1:758948/140‑1 (MQ=255)          tGCCCTCACGACGGCTCAGCTTGAGCTTAGGACCCAAATATCTTGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTcaca                                                                                                                            <  2:252238/137‑1 (MQ=255)          tGCCCTCACGACGGCTCAGCTTGAGCTTAGGACCCAAATATCTTGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTcaca                                                                                                                            >  1:252238/1‑137 (MQ=255)           gCCCTCACGACGGCTCAGCTTGAGCTTAGGACCCAAATATCTTGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAg                                                                                                                        <  2:231515/140‑1 (MQ=255)           gCCCTCACGACGGCTCAGCTTGAGCTTAGGACCCAAATATCTTGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAg                                                                                                                        <  1:192129/140‑1 (MQ=255)            cccTCACGACGGCTCAGCTTGAGCTTAGGACCCAAATATCTTGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGt                                                                                                                       <  2:721609/140‑1 (MQ=255)            cccTCACGACGGCTCAGCTTGAGCTTAGGACCCAAATATCTTGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGt                                                                                                                       <  2:1189856/140‑1 (MQ=255)             ccTCACGACGGCTCAGCTTGAGCTTAGGACCCAAATATCTTGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTa                                                                                                                      >  2:1516263/1‑140 (MQ=255)               tCACGACGGCTCAGCTTGAGCTTAGGACCCAAATATCTTGCCATTTTCTTTCTCCAACAAACCTGGTAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTAAt                                                                                                                    >  2:1059061/1‑140 (MQ=255)               tCACGACGGCTCAGCTTGAGCTTAGGACCCAAATATCTTGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGt                                                                                                                                >  2:37115/1‑128 (MQ=255)               tCACGACGGCTCAGCTTGAGCTTAGGACCCAAATATCTTGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGt                                                                                                                                <  1:37115/128‑1 (MQ=255)               tCACGACGGCTCAGCTTGAGCTTAGGACCCAAATATCTTGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGt                                                                                                                       <  2:805138/137‑1 (MQ=255)               tCACGACGGCTCAGCTTGAGCTTAGGACCCAAATATCTTGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGt                                                                                                                       >  1:805138/1‑137 (MQ=255)                    acgGCTCAGCTTGAGCTTAGGACCCAAATATCTTGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTcac                                                                                                                             >  1:1312820/1‑126 (MQ=255)                    acgGCTCAGCTTGAGCTTAGGACCCAAATATCTTGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTcac                                                                                                                             <  2:1312820/126‑1 (MQ=255)                      ggCTCAGCTTGAGCTTAGGACCCAAATATCTTGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTAATGTTAGTg                                                                                                             >  1:665089/1‑140 (MQ=255)                       gCTCAGCTTGAGCTTAGGACCCAAATATCTTGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTAATGTTAGTGa                                                                                                            >  1:323090/1‑140 (MQ=255)                           aGCTTGAGCTTAGGACCCAAATATCTTGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTAATGTTAGTGATGCg                                                                                                        >  1:103439/1‑140 (MQ=255)                           aGCTTGAGCTTAGGACCCAAATATCTTGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTAATGTTAGTGATGCg                                                                                                        >  1:576166/1‑140 (MQ=255)                                gggCTTAGGACCCAAATATCTTGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTAATGTTAGTGATGCGGAAAc                                                                                                   >  2:1079557/3‑140 (MQ=255)                                       ggACCCAAATATCTTGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTAATGTTAGTGATGCGGAAACCTgcggc                                                                                            >  1:99200/1‑140 (MQ=255)                                          cccAAATATCTTGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTAATGTTAGTGATGCGGAAACCTGCGGCGtt                                                                                         <  1:540047/140‑1 (MQ=255)                                          cccAAATATCTTGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTAATGTTAGTGATGCGGAAACCTGCGGCGtt                                                                                         <  1:881675/140‑1 (MQ=255)                                           ccAAATATCTTGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTAATGTTAGTGATGCGGAAACCTGCGGCGTTc                                                                                        <  1:1344434/140‑1 (MQ=255)                                           ccAAATATCTTGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTAATGTTAGTGATGCGGAAACCTGCGGCGTTc                                                                                        <  1:240018/140‑1 (MQ=255)                                                tatCTTGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTAATGTTAGTGATGCGGAAACCTGCGGCGTTCAGAGc                                                                                   <  1:1516263/140‑1 (MQ=255)                                                tatCTTGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTAATGTTAGTGATGCGGAAACCTGCGGCGTTCAGAGc                                                                                   <  1:1460127/140‑1 (MQ=255)                                                   cTTGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTAATGTTAGTGATGCGGAAACCTGCGGCGTTCAGAGCACg                                                                                <  2:68429/140‑1 (MQ=255)                                                   cTTGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTAATGTTAGTGATGCGGAAACCTGCGGCGTTCAGAGCACg                                                                                <  2:323090/140‑1 (MQ=255)                                                    ttGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTAATGTTAGTGATGCGGAAACCTGCGGCGTTCAGAGCACGa                                                                               >  2:1269400/1‑140 (MQ=255)                                                     tGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTAATGTTAGTGATGCGGAAACCTGCGGCGTTc                                                                                        >  2:1285871/1‑130 (MQ=255)                                                     tGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTAATGTTAGTGATGCGGAAACCTGCGGCGTTc                                                                                        <  1:1285871/130‑1 (MQ=255)                                                       ccATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTAATGTTAGTGATGCGGAAACCTGCGGCGTTCAGAGCACGAAta                                                                            >  1:375385/1‑140 (MQ=255)                                                            ttctttctCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTAATGTTAGTGATGCGGAAACCTGCGGCGTTCAGAGCACGAATAGTAGa                                                                       >  2:1478032/1‑140 (MQ=255)                                                                ttctCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTAATGTTAGTGATGCGGAAACCTGCGGCGTTCAGAGCACGAATAGTAGATTcg                                                                   <  2:1338936/140‑1 (MQ=255)                                                                ttctCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTAATGTTAGTGATGCGGAAACCTGCGGCGTTCAGAGCACGAATAGTAGATTcg                                                                   <  1:1269400/140‑1 (MQ=255)                                                                ttctCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTAATGTTAGTGATGCGGAAACCTGCGGCGTTCAGAGCACGAATAGTAGATTcg                                                                   <  1:453276/140‑1 (MQ=255)                                                                       acaaACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTAATGTTAGTGATGCGGAAACCTGCGGCGTTCAGAGCACGAATAGTAGATTCGCGGCCTg                                                            >  2:1253954/1‑140 (MQ=255)                                                                        caaACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTAATGTTAGTGATGCGGAAACCTGCGGCGTTCAGAGCACGAATAGTAGATTCGCGGCCTgg                                                           <  2:695960/140‑1 (MQ=255)                                                                            ccTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTAATGTTAGTGATGCGGAAACCTGCGGCGTTCAGAGCACGAATAGTAGATTCGCGGCCTGGAccc                                                       <  1:347924/140‑1 (MQ=255)                                                                             cTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTAATGTTAGTGATGCGGAAACCTGCGGCGTTCAGAGCACGAATAGTAGATTCGCGGCCTGGACCCg                                                      <  2:1074735/140‑1 (MQ=255)                                                                             cTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTAATGTTAGTGATGCGGAAACCTGCGGCGTTCAGAGCACGAATAGTAGATTCGCGGCCTGGACCCg                                                      >  1:1189335/1‑140 (MQ=255)                                                                             cTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTAATGTTAGTGATGCGGAAACCTGCGGCGTTCAGAGCACGAATAGTAGATTCGCGGCCTGGACCCg                                                      <  2:665089/140‑1 (MQ=255)                                                                             cTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTAATGTTAGTGATGCGGAAACCTGCGGCGTTCAGAGCACGAATAGTAGATTCGCGGCCTGGACCCg                                                      >  2:817947/1‑140 (MQ=255)                                                                               ggAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTAATGTTAGTGATGCGGAAACCTGCGGCGTTCAGAGCACGAATAGTAGATTCGCGGCCTGGACCCGGa                                                    <  1:1079557/140‑1 (MQ=255)                                                                               ggAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTAATGTTAGTGATGCGGAAACCTGCGGCGTTCAGAGCACGAATAGTAGATTCGCGGCCTGGACCCGGa                                                    <  2:1165029/140‑1 (MQ=255)                                                                                  aaaCGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTAATGTTAGTGATGCGGAAACCTGCGGCGTTCAGAGCACGAATAGTAGATTCGCGGCCTGGACCCGGACCt                                                 <  1:1478032/140‑1 (MQ=255)                                                                                      gAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTAATGTTAGTGATGCGGAAACCTGCGGCGTTCAGAGCACGAATAGTAGATTCGCGGCCTGGACCCGGACCTTTaa                                             <  2:576166/140‑1 (MQ=255)                                                                                          cGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTAATGTTAGTGATGCGGAAACCTGCGGCGTTCAGAGCACGAATAGTAGATTCGCGGCCTGGACCCGGACCTTTAACCAt                                         <  1:1253954/140‑1 (MQ=255)                                                                                                 cgcgACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTAATGTTAGTGATGCGGAAACCTGCGGCGTTCAGAGCACGAATAGTAGATTCGCGGCCTGGACCCGGACCTTTAACCATAACTTcc                                  <  1:1229928/140‑1 (MQ=255)                                                                                                   cgACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTAATGTTAGTGATGCGGAAACCTGCGGCGTTCAGAGCACGAATAGTAGATTCGCGGCCTGGACCCGGACCTTTAACCATAACTTCCAg                                <  2:103439/140‑1 (MQ=255)                                                                                                    gACGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTAATGTTAGTGCTGCGGAAACCTGCGGCGTTCAGAGCACGAATAGTAGATTCGCGGCCTGGACCCGGACCTTTAACCCTAACTTCCAGa                               >  2:424544/1‑140 (MQ=255)                                                                                                      cGTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTAATGTTAGTGATGCGGAAACCTGCGGCGTTCAGAGCACGAATAGTAGATTCGCGGCCTGGACCCGGACCTTTAACCATAACTTCCAGAtt                             >  2:758138/1‑140 (MQ=255)                                                                                                       gTTTTTTCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTAATGTTAGTGATGCGGAAACCTGCGGCGTTCAGAGCACGAATAGTAGATTCGCGGCCTGGACCCGGACCTTTAACCATAACTTCCAGATTc                            >  1:910541/1‑140 (MQ=255)                                                                                                         tttttCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTAATGTTAGTGATGCGGAAACCTGCGGCGTTCAGAGCACGAATAGTAGATTCGCGGCCTGGACCCGGACCTTTAACCATAACTTCCAg                                <  1:610528/134‑1 (MQ=255)                                                                                                         tttttCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTAATGTTAGTGATGCGGAAACCTGCGGCGTTCAGAGCACGAATAGTAGATTCGCGGCCTGGACCCGGACCTTTAACCATAACTTCCAg                                >  2:610528/1‑134 (MQ=255)                                                                                                             tCGGCGGACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTAATGTTAGTGATGCGGAAACCTGCGGCGTTCAGAGCACGAATAGTAGATTCGCGGCCTGGACCCGGACCTTTAACCATAACTTCCAGATTCTTGATg                      <  1:85137/140‑1 (MQ=255)                                                                                                              cggcggACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTAATGTTAGTGATGCGGAAACCTGCGGCGTTCAGAGCACGAATAGTAGATTCGCGGCCTGGACCCGGACCTTTAACCATAACTTCCAGATTCTTGATGc                     <  2:1479813/140‑1 (MQ=255)                                                                                                                 cggACGACAACCGTTATGAGGGTTCGGAGTCACATCAGTAATGTTAGTGATGCGGAAACCTGCGGCGTTCAGAGCACGAATAGTAGATTCGCGGCCTGGACCCGGACCTTTAACCATAACTTCCAGATTCTTGATGCCGt                  >  1:1515312/1‑140 (MQ=255)                                                                                                                    acgacAACCGTTATGAGGGTTCGGAGTCACATCAGTAATGTTAGTGATGCGGAAACCTGCGGCGTTCAGAGCACGAATAGTAGATTCGCGGCCTGGACCCGGACCTTTAACCATAACTTCCAGATTCTTGATGCCGTAtt               <  1:1260153/140‑1 (MQ=255)                                                                                                                              ttATGAGGGTTCGGAGTCACATCAGTAATGTTAGTGATGCGGAAACCTGCGGCGTTCAGAGCACGAATAGTAGATTCGCGGCCTGGACCCGGACCTTTAACCATAACTTCCAGATTCTTGATGCCGTATTCTTTCACGGc     >  2:1184343/1‑140 (MQ=255)                                                                                                                                 tGAGGGTTCGGAGTCACATCAGTAATGTTAGTGATGCGGAAACCTGCGGCGTTCAGAGCACGAATAGTAGATTCGCGGCCTGGACCCGGACCTTTAACCATAACTTCCAGATTCTTGATGCCGTATTCTTTCACGGCGTc  >  1:1030043/1‑140 (MQ=255)                                                                                                                                       |                                                                                                                                      ATAAGTCGGTGCCCTCACGACGGCTCAGCTTGAGCTTAGGACCCAAATATCTTGCCATTTTCTTTCTCCAACAAACCTGGAAAACGAGGCGTTATACGCGACGTTTTTTCGGCGGACGACAACCGTTATGAGGGATCGGAGTCACATCAGTAATGTTAGTGATGCGGAAACCTGCGGCGTTCAGAGCACGAATAGTAGATTCGCGGCCTGGACCCGGACCTTTAACCATAACTTCCAGATTCTTGATGCCGTATTCTTTCACGGCGTC  >  NC_000913/3441618‑3441885

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑