Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,604,3440CT42.0% 83.5 / 66.8 88S62F (TCT→TTT) bglJDNA‑binding transcriptional regulator BglJ
Reads supporting (aligned to +/- strand):  ref base C (4/47);  new base T (37/0);  total (41/47)
Fisher's exact test for biased strand distribution p-value = 1.17e-20
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 113 total aligned reads displayed.

AAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCA  >  NC_000913/4604205‑4604483
                                                                                                                                           |                                                                                                                                            
aaaTGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATtttttc                                                                                                                                              <  2:182899/140‑1 (MQ=255)
  aTGCGTCATGAGTAGTATCGGTATTTAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATtttttctt                                                                                                                                            >  1:902442/1‑140 (MQ=255)
  aTGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATtttttttt                                                                                                                                            >  1:1619506/1‑140 (MQ=255)
  aTGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATtttttctt                                                                                                                                            <  2:140540/140‑1 (MQ=255)
    gCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATtttttttttt                                                                                                                                          >  2:480850/1‑140 (MQ=255)
      gTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATtttttctttttt                                                                                                                                        >  1:1661779/1‑139 (MQ=255)
       tCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTttttctttttct                                                                                                                                       <  1:480850/140‑1 (MQ=255)
       tCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTttttctttttct                                                                                                                                       <  2:487076/140‑1 (MQ=255)
       tCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTttttctttttct                                                                                                                                       <  2:1406327/140‑1 (MQ=255)
       tCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTttttctttttct                                                                                                                                       <  1:141269/140‑1 (MQ=255)
         aTGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGc                                                                                                                                     <  2:165345/140‑1 (MQ=255)
         aTGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGc                                                                                                                                     <  2:354312/140‑1 (MQ=255)
                   tCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGt                                                                                                                           <  2:1554029/140‑1 (MQ=255)
                    cGGTATTTAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTg                                                                                                                          <  2:902442/140‑1 (MQ=255)
                      gTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAtttttttttttt                                                                                                                                         >  1:1726778/1‑123 (MQ=255)
                      gTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTTCCATGAGAAATGAg                                                                                                                        >  2:1674989/1‑140 (MQ=255)
                      gTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAg                                                                                                                        <  1:335091/140‑1 (MQ=255)
                      gTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATGTTTTCTTTTTCTGCCATCAGTAGTggg                                                                                                                        >  2:1579847/1‑138 (MQ=255)
                       tATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATGTTTTCTTTTTCTGCCATGAGAAGTGAgc                                                                                                                       <  2:1619506/140‑1 (MQ=255)
                        aTTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCATGAGAAGTGAgcg                                                                                                                      >  1:728175/1‑140 (MQ=255)
                        aTTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTCTGCCATGAGAAGTGAgcg                                                                                                                      >  2:1176073/1‑140 (MQ=255)
                        aTTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTTTGCCATGAGAAGTGAgcg                                                                                                                      >  1:1513217/1‑140 (MQ=255)
                        aTTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAgcg                                                                                                                      <  1:1176073/140‑1 (MQ=255)
                          tGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTCCGCCATGAGAAGTGAGCGCa                                                                                                                    >  1:197064/1‑140 (MQ=255)
                           gagaGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTCTGCCATGAGAAGTGAGCGCag                                                                                                                   >  1:187953/1‑140 (MQ=255)
                           gagaGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTCTGCCATGAGAAGTGAGCGCag                                                                                                                   >  1:911862/1‑140 (MQ=255)
                           gagaGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCag                                                                                                                   <  2:187953/140‑1 (MQ=255)
                           gagaGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCag                                                                                                                   <  2:1661779/140‑1 (MQ=255)
                           gagaGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGCCCCTTTTTTTTTTTTTGCCCTAAGTAGTGGACGCag                                                                                                                   >  2:335091/1‑140 (MQ=255)
                            agagTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCaga                                                                                                                  <  2:770656/140‑1 (MQ=255)
                                tttATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTTCCCTGAGAAGTGAGCGCAGAGAgg                                                                                                              >  2:572307/1‑140 (MQ=255)
                                tttATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTTCCATTTGAAGTGGGCGCAGAGAgg                                                                                                              >  2:798453/1‑140 (MQ=255)
                                        gAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTTCCCTGAGAAGGGAGCGCCGAGAGGGATTAttt                                                                                                      >  2:412572/1‑138 (MQ=255)
                                          aaGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTg                                                                                                    <  1:413273/140‑1 (MQ=255)
                                          aaGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTg                                                                                                    <  1:735285/140‑1 (MQ=255)
                                                     tAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAAc                                                                                         <  1:1299842/140‑1 (MQ=255)
                                                       aCCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCTGGTCTCGTTTGCGGCGGTGCTTTTTTTTTTTTCTTTCATGAGAAGTGAGCGCAGGGAGGGGGTATACTGTCTGACTCAAcgg                                                                                       >  2:1299842/1‑138 (MQ=255)
                                                       aCCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTg                                                                                       >  2:650221/1‑140 (MQ=255)
                                                         ccTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGc                                                                                     <  1:822001/140‑1 (MQ=255)
                                                             ataAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑Att                                                                                <  2:911862/140‑1 (MQ=255)
                                                                  cTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTTCCCTTAGAAGTGAGGGCAGAGAGGGGTTATTTTTCCTGACTGAACTGGCG‑GTTAAGtt                                                                           >  2:740592/1‑140 (MQ=255)
                                                                     cATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTTCCATGAGAAGTGAGGGCAGAGAGGGGTTATCTTGCCTGACTGAACTGGCG‑ATTAAGgtttc                                                                        >  2:231958/1‑138 (MQ=255)
                                                                                 aGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTTCCCTGAGAAGTGAGCGCAGAGAGGGGTTATTTTTCCTGGCTGAACTGGGG‑ATTAAGTTTTCGCGTACCCGGCg                                                            >  2:1761234/1‑140 (MQ=255)
                                                                                  gTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCCTTTTTTTTTTTTTTTCCCTTAGAAGTGGGGGCCGGGAGGGGTTATTTTGCCTTTCTGAACTGGCG‑ATTAAATTTCCGCGTACCCGGCGt                                                           >  2:839534/1‑140 (MQ=255)
                                                                                  gTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTTCCATGAGAAGTGGGGGCAGAGAGGGGTTATCTTTCCTGACTGAACTGGCG‑GTTAAGTTTTCCCGGACCCGGCgg                                                           >  2:1140756/1‑139 (MQ=255)
                                                                                  gTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTTCCATGAGAAATGAGCGCAGAGAGGGGGTATCTTGCCTGACTGAACTTGCG‑GTTTAGTTTTCGCGTACCCcgcgg                                                           >  2:116870/1‑139 (MQ=255)
                                                                                  gTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCCTGAGAAGGGAGCGCAGAGAGGGGTTATCTTTCCTGACTGAAATGGCG‑GTTAAGTTTTCGCGTACCCcgcgg                                                           >  2:398803/1‑139 (MQ=255)
                                                                                  gTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCATGAGAAGGGAGCGCAGAGAGGGGTTATCTTTCCTGACTGAACTGGCG‑ATTAAGTTTTCGCCTACCCGGCgg                                                           >  2:24319/1‑139 (MQ=255)
                                                                                  gTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCATGAGAAATGAGCGCAGAGAGGGGTTATCTTGCCTGACTGAACTGGCG‑GTTAAGTTTCCTCGGACCCGGCGt                                                           >  2:91236/1‑140 (MQ=255)
                                                                                  gTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGCCATTTTTTCTTTTTCTTCCCTCAGAAATGAGCGCCGAGAGGGGTTATCTTTCCTGACTCAACTGGCG‑ATTAAGTTTCCCCGTACCCcgcgc                                                           >  2:1200768/1‑139 (MQ=255)
                                                                                   tCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTTCCATGAGAAGTGAGCGCAGAGAGGGGTTATCTTTCCTGACTGAACTGGCG‑ATTAAGTTTTCGCGTACCCcgcggt                                                          >  2:1406591/1‑138 (MQ=255)
                                                                                   tCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTTCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTTAATTTTCGCGTACCCcgcggt                                                          >  2:745892/1‑138 (MQ=255)
                                                                                   tCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCCTGAGAAGTGAGCGCAGAGAGGGGTTATCTTTCCTGACTGAAATGGCG‑GTTAAGTTTTCGCGGACCCGGCggt                                                          >  2:216979/1‑138 (MQ=255)
                                                                                   tCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCGTACCCg                                                               >  1:947911/1‑135 (MQ=255)
                                                                                    cAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTGCTTTTTTCTTTTTTTCTCTTGAGGAAGGGGCGCCGGGGGGGGTTTTTTTTCCTGACTCCACGTGCG‑CATTAGGTTCCGCGGAGCCGGGGttt                                                         >  2:1450049/1‑140 (MQ=255)
                                                                                    cAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCCTGAGAAGGGAGCGCCGAGAGGGGTTATCTTTCCTGACTGAACTTGCG‑GTTAAGTTTTCGCGTACCCCGCGgtt                                                         >  2:857069/1‑140 (MQ=255)
                                                                                    cAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCGTACCCGGCGttt                                                         <  1:231958/140‑1 (MQ=255)
                                                                                      ggAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCGTACCCGGCGTTTAg                                                       <  1:650221/140‑1 (MQ=255)
                                                                                       gAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTGCTTTTTTTTTTTTTTGTCGCAAGAAAGGGGCGCCGAGGGGGGTTGTCTTGTCTGCCTCAACTAGAGAATAAAGTTTCC‑CGGACCCGGGGtttctt                                                      >  2:1132666/1‑137 (MQ=255)
                                                                                           cATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCGTACCCGGCGTTTAGTTAtt                                                  <  1:1069037/140‑1 (MQ=255)
                                                                                            aTTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTg                                                 <  1:738752/140‑1 (MQ=255)
                                                                                            aTTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTg                                                 <  1:1132666/140‑1 (MQ=255)
                                                                                            aTTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTg                                                 <  1:1406591/140‑1 (MQ=255)
                                                                                             tttCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTTCCCTGAGAAGTGAGCGCAGAGAGGGGTTATCTTGCCTGACTGAACTGGCG‑GTTAAGTTTCCCCGTACCCCGCGGTTTGTTATTGc                                                >  2:1064495/1‑140 (MQ=255)
                                                                                             tttCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTTTGCCATGAGAAGGGAGCGCAGAGAGGGGTTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTTCGCGGACCCCGCGGTTTGTTAtttg                                                >  2:1610925/1‑138 (MQ=255)
                                                                                              ttCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑GTTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCg                                               <  1:982667/140‑1 (MQ=255)
                                                                                               tCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCgg                                              <  1:398803/140‑1 (MQ=255)
                                                                                                cAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGga                                             <  1:569419/140‑1 (MQ=255)
                                                                                                cAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGga                                             <  1:298595/140‑1 (MQ=255)
                                                                                                 aGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGgat                                            <  2:1058663/140‑1 (MQ=255)
                                                                                                   gATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTCTGCCCTGAGAAGGGAGCGCAGAGAGGGGTTATCTTTCCTGACTGAACTGGCG‑GTTAAATTTTCGCGTACCCCGCGGTTTGTTTTTTCGggtgg                                          >  2:679293/1‑139 (MQ=255)
                                                                                                   gATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGgatga                                          <  1:1140756/140‑1 (MQ=255)
                                                                                                    aTGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGgatgat                                         <  1:944190/140‑1 (MQ=255)
                                                                                                    aTGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCACAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCGTTCCCGGCGTTTAGTTATTGCGgatgat                                         <  1:368369/140‑1 (MQ=255)
                                                                                                    aTGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCCGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGgatgat                                         <  2:197064/140‑1 (MQ=255)
                                                                                                     tGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGgatgatg                                        <  2:635942/140‑1 (MQ=255)
                                                                                                      gCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCATGAGAAGGGAGCGCAGAGAGGGGTTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTTCCCGGACCCGGCGGTTTGTTATTGCGggtgatga                                       >  2:521175/1‑140 (MQ=255)
                                                                                                       ccATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCCTGAGAAGGGAGCGCAGAGAGGGGTTATTTTTCCTGACTGAACTGGCG‑ATTAAGTTTCCCCGTACCCCGCGGTTTGTTATTTCGggtgatgat                                      >  2:944190/1‑140 (MQ=255)
                                                                                                        cATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCATGAGAAGGGAGCGCAGAGAGGGGTTATCTTTCCTGACTGAACTGGCG‑ATTAAGTTTCCCCGGACCCGGCGGTTTGTTATTGCGGGGGATGata                                     >  2:86838/1‑140 (MQ=255)
                                                                                                              gcgGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAg                               <  1:1200768/140‑1 (MQ=255)
                                                                                                              gcgGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAg                               <  1:1064495/140‑1 (MQ=255)
                                                                                                                 gATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTTCCCTGAGAAGTGAGGGCCGGGAGGGGTTATTTTTCCTGACTGAACTGGCG‑ATTAAGTTTTCGCGGACCCGGCGGTTTATTTTTTTGGGTGATGATAtttgaggtc                            >  2:1201937/1‑133 (MQ=255)
                                                                                                                   tctcGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCgg                          <  1:798453/140‑1 (MQ=255)
                                                                                                                   tctcGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCgg                          <  1:679293/140‑1 (MQ=255)
                                                                                                                    ctcGTTTGCGGCGGTCATTTTTTTTTTTTTTTCCCTGAGAAGTGAGCGCAGAGAGGGGTTATCTTTCCTGACTGAAATGGGG‑ATTAAATTTTCGCGTACCCCGCGTTTTGTTTTTTCGGGTGATGATATTTAAGCTCggg                         >  2:1228858/1‑139 (MQ=255)
                                                                                                                      cGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCATGAGAAGTGGGCGCAGAGGGGGATTTTCTTTTCTGACTGAACTGGGG‑GTTAAATTTTCGCGGACCCGGCGTTTTGTTTTTTCGGGTGATGATATTGAAGCTCGGCTg                       >  2:1675982/1‑140 (MQ=255)
                                                                                                                      cGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTg                       <  1:1258867/140‑1 (MQ=255)
                                                                                                                       gTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGa                      <  1:740592/140‑1 (MQ=255)
                                                                                                                       gTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGa                      <  1:91236/140‑1 (MQ=255)
                                                                                                                            cggcggTCCTTTTTTTTTTTTTTTCCCTGAGAAGTGAGCGCAGAGAGGGGTTATCTTGCCTGACTGAACTTGCG‑ATTAAGGTTCCGCGTACCCCGCGTTTTGTTTTTGCGGGTGGTGATATTTGAGCTCGGCTGATTGGt                 >  2:143817/1‑140 (MQ=255)
                                                                                                                                 gTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCAtt            <  1:1761234/140‑1 (MQ=255)
                                                                                                                                 gTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCAtt            <  1:1675982/140‑1 (MQ=255)
                                                                                                                                    aTTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTc         <  1:1201937/140‑1 (MQ=255)
                                                                                                                                      tttttctttttcTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGc       >  2:567072/1‑140 (MQ=255)
                                                                                                                                      tttttctttttcTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGc       >  2:1467741/1‑140 (MQ=255)
                                                                                                                                         ttctttttctGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCAt    <  1:1063897/140‑1 (MQ=255)
                                                                                                                                         ttctttttctGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCAt    <  1:1450049/140‑1 (MQ=255)
                                                                                                                                         ttctttttctGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCAt    <  1:412572/140‑1 (MQ=255)
                                                                                                                                         ttctttttctGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCAt    <  1:521175/140‑1 (MQ=255)
                                                                                                                                           ctttttctGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCa  >  2:1299466/1‑140 (MQ=255)
                                                                                                                                           |                                                                                                                                            
AAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCA  >  NC_000913/4604205‑4604483

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑