BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	259,264	A→G	G279G (GGT→GGC)	phoE ←	outer membrane porin PhoE

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	259,264	0	A	G	100.0%	455.0 / NA	121	G279G (GGT→GGC)	phoE	outer membrane porin PhoE
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (70/51); total (70/51)

Only 100 of 121 total aligned reads displayed.

TATAATCAACAAACGCTGACATATTTTTGTTGAAATAATACGTAGCACCGACGTCGATATAATTGACCAGATCTTCATCACCGATACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGACCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAATAGAAAGTTGCCAGATAAATATTATTGGCATCGTATTTCAG  >  NC_000913/259128‑259398

tataATCAACAAACGCTGACATATTTTTGTTGAAATAATACGTAGCACCGACGTCGATTTAATTGACCAGATCTTCATCACCGATACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCa                                                                                                                                     >  1:1545614/1‑140 (MQ=255)

  taATCAACAAACGCTGACATATTTTTGTTGAAATAATACGTAGCACCGACGTCGATATAATTGACCAGATCTTCATCACCGATACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCaaa                                                                                                                                   >  2:224163/1‑140 (MQ=255)

    aTCAACAAACGCTGACATATTTTTGTTGAAATAATACGTAGCACCGACGTCGATATAATTGACCAGATCTTCATCACCGATACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGt                                                                                                                                 <  1:469133/140‑1 (MQ=255)

    aTCAACAAACGCTGACATATTTTTGTTGAAATAATACGTAGCACCGACGTCGATATAATTGACCAGATCTTCATCACCGATACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGt                                                                                                                                 <  2:1255815/140‑1 (MQ=255)

      caacaaACGCTGACATATTTTTGTTGAAATAATACGTAGCACCGACGTCGATATAATTGACCAGATCTTCATCACCGATACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCa                                                                                                                               <  1:1580637/140‑1 (MQ=255)

        acaaACGCTGACATATTTTTGTTGAAATAATACGTAGCACCGACGTCGATATAATTGACCAGATCTTCATCACCGATACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCaaa                                                                                                                             <  1:62617/140‑1 (MQ=255)

        acaaACGCTGACATATTTTTGTTGAAATAATACGTAGCACCGACGTCGATATAATTGACCAGATCTTCATCACCGATACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCaaa                                                                                                                             <  2:77934/140‑1 (MQ=255)

               cTGACATATTTTTGTTGAAATAATACGTAGCACCGACGTCGATATAATTGACCAGATCTTCATCACCGATACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGcc                                                                                                                                      >  1:714434/1‑124 (MQ=255)

                 gACATATTTTTGTTGAAATAATACGTAGCACCGACGTCGATATAATTGACCAGATCTTCATCACCGATACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTg                                                                                                                    >  2:525308/1‑140 (MQ=255)

                       tttttGTTGAAATAATACGTAGCACCGACGTCGATATAATTGACCAGATCTTCATCACCGATACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGAc                                                                                                              <  1:466431/140‑1 (MQ=255)

                       tttttGTTGAAATAATACGTAGCACCGACGTCGATATAATTGACCAGATCTTCATCACCGATACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGAc                                                                                                              <  2:1221967/140‑1 (MQ=255)

                         tttGTTGAAATAATACGTAGCACCGACGTCGATATAATTGACCAGATCTTCATCACCGATACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCg                                                                                                            <  1:1392193/140‑1 (MQ=255)

                            gttgAAATAATACGTAGCACCGACGTCGATATAATTGACCAGATCTTCATCACCGATACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCtt                                                                                                         >  1:202246/1‑140 (MQ=255)

                              tgAAATAATACGTAGCACCGACGTCGATATAATTGACCAGATCTTCATCACCGATACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCa                                                                                                       <  1:1155884/140‑1 (MQ=255)

                                  ataataCGTAGCACCGACGTCGATATAATTGACCAGATCTTCATCACCGATACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGt                                                                                                   >  1:1041440/1‑140 (MQ=255)

                                   taataCGTAGCACCGACGTCGATATAATTGACCAGATCTTCATCACCGATACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGtt                                                                                                  <  2:1041440/140‑1 (MQ=255)

                                      taCGTAGCACCGACGTCGATATAATTGACCAGATCTTCATCACCGATACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCtg                                                                                               <  1:1533573/140‑1 (MQ=255)

                                       aCGTAGCACCGACGTCGATATAATTGACCAGATCTTCATCACCGATACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCtgt                                                                                              <  1:973891/140‑1 (MQ=255)

                                          tAGCACCGACGTCGATATAATTGACCAGATCTTCATCACCGATACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTc                                                                                           <  2:526671/140‑1 (MQ=255)

                                          tAGCACCGACGTCGATATAATTGACCAGATCTTCATCACCGATACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTc                                                                                           >  1:1290120/1‑140 (MQ=255)

                                           aGCACCGACGTCGATATAATTGACCAGATCTTCATCACCGATACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCt                                                                                          >  2:128050/1‑140 (MQ=255)

                                            gCACCGACGTCGATATAATTGACCAGATCTTCATCACCGATACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCtt                                                                                         <  2:1684207/140‑1 (MQ=255)

                                            gCACCGACGTCGATATAATTGACCAGATCTTCATCACCGATACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCtt                                                                                         >  2:1181802/1‑140 (MQ=255)

                                             cACCGACGTCGATATAATTGACCAGATCTTCATCACCGATACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTa                                                                                        >  2:963352/1‑140 (MQ=255)

                                                cGACGTCGATATAATTGACCAGATCTTCATCACCGATACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTg                                                                                     >  1:707717/1‑140 (MQ=255)

                                                  aCGTCGATATAATTGACCAGATCTTCATCACCGATACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGc                                                                                   >  1:1697631/1‑140 (MQ=255)

                                                     tCGATTTAATTGACCAGATCTTCATCACCGATACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCaaa                                                                                <  2:1545614/140‑1 (MQ=255)

                                                     tCGATATAATTGACCAGATCTTCATCACCGATACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCaaa                                                                                <  1:420431/140‑1 (MQ=255)

                                                      cGATATAATTGACCAGATCTTCATCACCGATACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAg                                                                               <  1:963352/140‑1 (MQ=255)

                                                         tataATTGACCAGATCTTCATCACCGATACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAgccg                                                                            >  2:1416589/1‑140 (MQ=255)

                                                             aTTGACCAGATCTTCATCACCGATACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAg                                                                        >  2:158818/1‑140 (MQ=255)

                                                              ttGACCAGATCTTCATCACCGATACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGt                                                                       >  2:896853/1‑140 (MQ=255)

                                                                  ccAGATCTTCATCACCGATACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTAtt                                                                   >  1:1444571/1‑140 (MQ=255)

                                                                   cAGATCTTCATCACCGATACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTg                                                                  >  2:1014726/1‑140 (MQ=255)

                                                                   cAGATCTTCATCACCGATACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTg                                                                  >  1:279620/1‑140 (MQ=255)

                                                                   cAGATCTTCATCACCGATACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTg                                                                  >  2:484921/1‑140 (MQ=255)

                                                                   cAGATCTTCATCACCGATACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTg                                                                  <  2:1444571/140‑1 (MQ=255)

                                                                      aTCTTCATCACCGATACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCg                                                               >  1:1681733/1‑140 (MQ=255)

                                                                           catcaCCGATACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCAtt                                                          <  1:1416589/140‑1 (MQ=255)

                                                                                ccGATACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCg                                                     >  2:1490661/1‑140 (MQ=255)

                                                                                ccGATACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCg                                                     >  1:1451145/1‑140 (MQ=255)

                                                                                ccGATACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGGATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCg                                                     >  1:790784/1‑140 (MQ=255)

                                                                                 cGATACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCgt                                                    >  2:1435128/1‑140 (MQ=255)

                                                                                   aTACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCgtgt                                                  >  2:1020159/1‑140 (MQ=255)

                                                                                   aTACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCgtgt                                                  >  1:707761/1‑140 (MQ=255)

                                                                                   aTACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCgtgt                                                  >  1:1206006/1‑140 (MQ=255)

                                                                                   aTACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCgtgt                                                  >  2:934890/1‑140 (MQ=255)

                                                                                    tACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGtt                                                 <  1:1181802/140‑1 (MQ=255)

                                                                                     aCCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGttt                                                <  1:1187750/140‑1 (MQ=255)

                                                                                      ccTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTc                                               <  1:158818/140‑1 (MQ=255)

                                                                                       cTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCa                                              <  2:1697631/140‑1 (MQ=255)

                                                                                       cTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCa                                              <  1:224163/140‑1 (MQ=255)

                                                                                         tCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGa                                            >  1:352676/1‑140 (MQ=255)

                                                                                         tCAATATCTATCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGa                                            >  2:814267/1‑140 (MQ=255)

                                                                                           aaTATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCa                                              <  1:33013/136‑1 (MQ=255)

                                                                                           aaTATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCa                                              >  2:33013/1‑136 (MQ=255)

                                                                                           aaTATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAAt                                          >  1:482908/1‑140 (MQ=255)

                                                                                           aaTATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAAt                                          >  1:429886/1‑140 (MQ=255)

                                                                                               tCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAATAGaa                                      >  2:469698/1‑140 (MQ=255)

                                                                                                  ttCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGCCCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAATAGAAAGt                                   >  2:1475887/1‑140 (MQ=255)

                                                                                                  ttCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAATAGAAAGt                                   >  2:1692658/1‑140 (MQ=255)

                                                                                                  ttCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAATAGAAAGt                                   >  2:804176/1‑140 (MQ=255)

                                                                                                  ttCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAATAGAAAGt                                   >  1:1476711/1‑140 (MQ=255)

                                                                                                   tCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAATAGAAAGtt                                  >  1:591765/1‑140 (MQ=255)

                                                                                                   tCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAATAGAAAGtt                                  >  2:242774/1‑140 (MQ=255)

                                                                                                    cccTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAATAGAAAGTTg                                 <  2:1547451/140‑1 (MQ=255)

                                                                                                    cccTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAATAGAAAGTTg                                 <  1:484921/140‑1 (MQ=255)

                                                                                                    cccTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAATAGAAAGTTg                                 <  1:1044701/140‑1 (MQ=255)

                                                                                                     ccTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAATAGAAAGTTGc                                <  2:707761/140‑1 (MQ=255)

                                                                                                     ccTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAATAGAAAGTTGc                                <  1:896853/140‑1 (MQ=255)

                                                                                                     ccTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAATAGAAAGTTGc                                >  2:735476/1‑140 (MQ=255)

                                                                                                     ccTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAATAGAAAGTTGc                                <  1:1067924/140‑1 (MQ=255)

                                                                                                     ccTTTCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAATAGAAAGTTGc                                <  1:1014726/140‑1 (MQ=255)

                                                                                                        ttCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAAt                                          <  1:909486/127‑1 (MQ=255)

                                                                                                        ttCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAAt                                          >  2:909486/1‑127 (MQ=255)

                                                                                                         tCGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAATAGAAAGTTGCCAGa                            >  2:1558784/1‑140 (MQ=255)

                                                                                                          cGATAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAATAGAAAGTTGCCAGAt                           <  1:128050/140‑1 (MQ=255)

                                                                                                            aTAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAATAGAAAGTTGCCAGATaa                         <  1:242774/140‑1 (MQ=255)

                                                                                                            aTAAGACATAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAATAGAAAGTTGCCAGATaa                         <  2:279620/140‑1 (MQ=255)

                                                                                                                   aTAACCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAATAGAAAGTTGCCAGATAAAtattat                  <  1:525308/140‑1 (MQ=255)

                                                                                                                      aCCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAATAGAAAGTTGCCAGATAAATATTATTgg               >  2:96953/1‑140 (MQ=255)

                                                                                                                      aCCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAATAGAAAGTTGCCAGATAAATATTATTgg               <  2:19409/140‑1 (MQ=255)

                                                                                                                      aCCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAATAGAAAGTTGCCAGATAAATATTATTgg               <  1:1435128/140‑1 (MQ=255)

                                                                                                                      aCCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAATAGAAAGTTGCCAGATAAATATTATTgg               >  1:1647125/1‑140 (MQ=255)

                                                                                                                      aCCCAGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAATAGAAAGTTGACAGATAAATATTATTgg               <  1:1020159/140‑1 (MQ=255)

                                                                                                                          aGCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAATAGAAAGTTGCCAGATAAATATTATTGGCATc           >  2:1506547/1‑140 (MQ=255)

                                                                                                                           gCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTTTTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAATAGAAAGTTGCCAGATAAATATTATTGGCATCg          >  1:805514/1‑140 (MQ=255)

                                                                                                                           gCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAATAGAAAGTTGCCAGATAAATATTATTGGCATCg          <  2:591765/140‑1 (MQ=255)

                                                                                                                           gCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAATAGAAAGTTGCCAGATAAATATTATTGGCATCg          <  1:1692658/140‑1 (MQ=255)

                                                                                                                           gCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAATAGAAAGTTGCCAGATAAATATTATTGGCATCg          >  2:1742507/1‑140 (MQ=255)

                                                                                                                           gCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAATAGAAAGTTGCCAGATAAATATTATTGGCATCg          >  1:1292642/1‑140 (MQ=255)

                                                                                                                           gCGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAATAGAAAGTTGCCAGATAAATATTATTGACATCg          >  2:807299/1‑140 (MQ=255)

                                                                                                                            cGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAATAGAAAGTTGCCAGATAAATATTATTGGCATCGt         >  1:971510/1‑140 (MQ=255)

                                                                                                                            cGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAATAGAAAGTTGCCAGATAAATATTATTGGCATCGt         >  1:958383/1‑140 (MQ=255)

                                                                                                                            cGATGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAATAGAAAGTTGCCAGATAAATATTATTGGCATCGt         >  1:1693403/1‑140 (MQ=255)

                                                                                                                               tGGACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAATAGAAAGTTGCCAGATAAATATTATTGGCATCGTAtt      >  1:1022730/1‑140 (MQ=255)

                                                                                                                                 gACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAATAGAAAGTTGCCAGATAAATATTATTGGCATCGTATTTc    >  2:672006/1‑140 (MQ=255)

                                                                                                                                 gACGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAATAGAAAGTTGCCAGATAAATATTATTGGCATCGTATTTc    >  1:1358931/1‑140 (MQ=255)

                                                                                                                                  aCGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAATAGAAAGTTGCCAGATAAATATTATTGGCATCGTATTTCa   <  2:350748/140‑1 (MQ=255)

                                                                                                                                   cGCAGGCCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAATAGAAAGTTGCCAGATAAATATTATTGGCATCGTATTTCAg  <  2:958383/140‑1 (MQ=255)

TATAATCAACAAACGCTGACATATTTTTGTTGAAATAATACGTAGCACCGACGTCGATATAATTGACCAGATCTTCATCACCGATACCTTCAATATCTTTCCCTTTCGATAAGACATAACCCAGCGATGGACGCAGACCAAAGTCAAACTGGTATTGAGCGACCGCTTCAAAGTTCTGTGTCTTATTGGCAAAGCCGCCAGTTATTGGCGTCATTTTGCGTGTTTCAGAATAGAAAGTTGCCAGATAAATATTATTGGCATCGTATTTCAG  >  NC_000913/259128‑259398

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`