Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	476,195	C→A	A59A (GCG→GCT)	atl ←	DNA base‑flipping protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	476,195	0	C	A	100.0%	322.9 / NA	90	A59A (GCG→GCT)	atl	DNA base‑flipping protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (42/48);  total (42/48)

TCGCTGACGCTGTAAATCCGGTCCGGTTAGCGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAGGTAATTTTTCAGCATAATCTGGAA  >  NC_000913/476060‑476331                                                                                                                                        |                                                                                                                                         tCGCTGACGCTGTAAATCCGGTCCGGTTAGCGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCa                                                                                                                                      >  1:1623407/1‑140 (MQ=255) tCGCTGACGCTGTAAATCCGGTCCGGTTAGCGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCa                                                                                                                                      >  2:1078068/1‑140 (MQ=255)  cGCTGACGCTGTAAATCCGGTCCGGTTAGCGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAGCACACCGCCCACCTGGCGCGCGGCGCGGGGCGATccagccag                                                                                                                                     >  1:227820/1‑140 (MQ=255)  cGCTGACGCTGTAAATCCGGTCCGGTTAGCGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATccagccag                                                                                                                                     >  2:214842/1‑140 (MQ=255)  cGCTGACGCTGTAAATCCGGTCCGGTTAGCGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATccagccag                                                                                                                                     >  2:464562/1‑140 (MQ=255)   gCTGACGCTGTAAATCCGGTCCGGTTAGCGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGt                                                                                                                                    <  2:872179/140‑1 (MQ=255)       gcGCTGTAAATCCGGTCCGGTTAGCGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCg                                                                                                                                <  2:1571363/139‑1 (MQ=255)       aCGCTGTAAATCCGGTCCGGTTAGCGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCg                                                                                                                                <  2:1502682/140‑1 (MQ=255)        cGCTGTAAATCCGGTCCGGTTAGCGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGc                                                                                                                               >  2:1072022/1‑140 (MQ=255)         gCTGTAAATCCGGTCCGGTTAGCGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGcc                                                                                                                              <  1:1078886/140‑1 (MQ=255)          cTGTAAATCCGGTCCGGTTAGCGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCca                                                                                                                             <  2:1662373/140‑1 (MQ=255)           tGTAAATCCGGTCCGGTTAGCGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAGCACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCcac                                                                                                                            <  2:227820/140‑1 (MQ=255)           tGTAAATCCGGTCCGGTTAGCGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCcac                                                                                                                            <  1:1078068/140‑1 (MQ=255)           tGTAAATCCGGTCCGGTTAGCGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCcac                                                                                                                            >  1:514551/1‑140 (MQ=255)            gTAAATCCGGTCCGGTTAGCGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCcaca                                                                                                                           <  1:1653385/140‑1 (MQ=255)                aTCCGGTCCGGTTAGCGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCAc                                                                                                                       <  1:1536552/140‑1 (MQ=255)                 tccggtccggTTAGCGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGGTCCAGCCAGTTTCGCCTCATCAcc                                                                                                                      <  2:1699163/140‑1 (MQ=255)                 tccggtccggTTAGCGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCAcc                                                                                                                      >  2:693998/1‑140 (MQ=255)                 tccggtccggTTAGCGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCAcc                                                                                                                      <  1:1050954/140‑1 (MQ=255)                  ccggtccggtTAGCGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCg                                                                                                                     <  1:254820/140‑1 (MQ=255)                  ccggtccggtTAGCGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCg                                                                                                                     <  1:802830/140‑1 (MQ=255)                  ccggtccggtTAGCGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCg                                                                                                                     <  1:741074/140‑1 (MQ=255)                    ggtccggtTAGCGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTa                                                                                                                   <  2:1193920/140‑1 (MQ=255)                    ggtccggtTAGCGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTa                                                                                                                   <  2:689328/140‑1 (MQ=255)                     gtccggtTAGCGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATc                                                                                                                         >  2:783345/1‑133 (MQ=255)                     gtccggtTAGCGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATc                                                                                                                         <  1:783345/133‑1 (MQ=255)                       ccggtTAGCGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAgt                                                                                                                >  2:536950/1‑140 (MQ=255)                       ccggtTAGCGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAgt                                                                                                                >  2:33273/1‑140 (MQ=255)                        cggtTAGCGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAgtg                                                                                                               <  2:1515249/140‑1 (MQ=255)                        cggtTAGCGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAgtg                                                                                                               <  2:1315379/140‑1 (MQ=255)                          gtTAGCGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTCCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAgtggt                                                                                                             >  1:407686/1‑140 (MQ=255)                              gccaaaTTGTGCCGTGGCGATTAACCCCCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACCCCCCGCCCCCCTGGCGGGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACa                                                                                                         <  2:1405390/137‑1 (MQ=255)                              gCGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACa                                                                                                         <  1:635251/140‑1 (MQ=255)                              gCGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACa                                                                                                         <  1:693998/140‑1 (MQ=255)                               cGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACAt                                                                                                        >  2:1496922/1‑140 (MQ=255)                                 aaaTTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTCCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAg                                                                                                      <  2:407686/140‑1 (MQ=255)                                   aTTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGcc                                                                                                    <  1:949426/140‑1 (MQ=255)                                    ttGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCt                                                                                                   <  1:332238/140‑1 (MQ=255)                                       tgCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAgtg                                                                                                               >  2:749231/1‑125 (MQ=255)                                       tgCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAgtg                                                                                                               <  1:749231/125‑1 (MQ=255)                                       tgCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACa                                                                                                         >  2:462719/1‑131 (MQ=255)                                       tgCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACa                                                                                                         <  1:462719/131‑1 (MQ=255)                                                  ttAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAgcggc                                                                                     <  2:772809/140‑1 (MQ=255)                                                  ttAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAgcggc                                                                                     <  2:514551/140‑1 (MQ=255)                                                  ttAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAgcggc                                                                                     <  2:1206303/140‑1 (MQ=255)                                                  ttAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAgcggc                                                                                     <  2:109504/140‑1 (MQ=255)                                                  ttAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAgcggc                                                                                     <  2:1623407/140‑1 (MQ=255)                                                     accaccCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGcgac                                                                                  <  1:464562/140‑1 (MQ=255)                                                        accCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGAt                                                                               >  1:263875/1‑140 (MQ=255)                                                              tGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACGCCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCa                                                                         >  2:217814/1‑140 (MQ=255)                                                               gCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAg                                                                        >  2:1311277/1‑140 (MQ=255)                                                               gCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAg                                                                        >  1:485345/1‑140 (MQ=255)                                                                    ggTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGAcgcg                                                                   <  1:214842/140‑1 (MQ=255)                                                                       aaGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTg                                                                <  2:263875/140‑1 (MQ=255)                                                                        aGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTgg                                                               >  1:1150619/1‑140 (MQ=255)                                                                        aGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTgg                                                               >  2:730120/1‑140 (MQ=255)                                                                             ctgcCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGaaa                                                          >  1:901794/1‑140 (MQ=255)                                                                              tgcCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAAt                                                         >  1:1012594/1‑140 (MQ=255)                                                                                    cAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAAtct                                                   >  1:1376228/1‑140 (MQ=255)                                                                                     aGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAAtctt                                                  <  1:1544732/140‑1 (MQ=255)                                                                                     aGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAAtctt                                                  <  2:485345/140‑1 (MQ=255)                                                                                          gaCGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCtttt                                             >  2:1452886/1‑140 (MQ=255)                                                                                             gCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTcc                                          <  2:1033325/140‑1 (MQ=255)                                                                                             gCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTcc                                          <  2:1012594/140‑1 (MQ=255)                                                                                               tttAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCAt                                        >  1:1731394/1‑140 (MQ=255)                                                                                                    cacgcCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCATCTTTTTCCATCtttt                                   <  1:217814/140‑1 (MQ=255)                                                                                                       acCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTttctt                                >  1:1534384/1‑140 (MQ=255)                                                                                                       acCGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTttctt                                >  2:1628379/1‑140 (MQ=255)                                                                                                         cGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTcc                              >  1:394487/1‑140 (MQ=255)                                                                                                         cGCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTcc                              >  1:332629/1‑140 (MQ=255)                                                                                                          gCCCACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCt                             <  2:394487/140‑1 (MQ=255)                                                                                                           cccACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTg                            >  2:1051442/1‑140 (MQ=255)                                                                                                           cccACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTg                            >  1:1725806/1‑140 (MQ=255)                                                                                                           cccACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTg                            >  1:1298433/1‑140 (MQ=255)                                                                                                           cccACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTg                            >  1:1157134/1‑140 (MQ=255)                                                                                                             cACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAg                          >  2:1384289/1‑140 (MQ=255)                                                                                                             cACCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAg                          >  1:474255/1‑140 (MQ=255)                                                                                                              aCCTGGCGCGCGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAgg                         <  2:1298433/140‑1 (MQ=255)                                                                                                                   gcgcgcGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAGGTAAtt                    >  2:82009/1‑140 (MQ=255)                                                                                                                   gcgcgcGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAGGTAAtt                    >  1:1402160/1‑140 (MQ=255)                                                                                                                   gcgcgcGGCGCGGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAGGTAAtt                    >  2:1091858/1‑140 (MQ=255)                                                                                                                     gcgcggcgcgGGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAGGTAAtttt                  <  2:1402160/140‑1 (MQ=255)                                                                                                                        cggcgcggGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAGGTAATTTTTCa               >  1:319662/1‑140 (MQ=255)                                                                                                                        cggcgcggGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAGGTAATTTTTCa               >  1:1611399/1‑140 (MQ=255)                                                                                                                          gcgcggGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAGGTAATTTTTCAGc             >  2:1732786/1‑140 (MQ=255)                                                                                                                           cgcggGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAGGTAATTTTTCAGCa            <  1:1732786/140‑1 (MQ=255)                                                                                                                           cgcggGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAGGTAATTTTTCAGCa            <  1:33273/140‑1 (MQ=255)                                                                                                                           cgcggGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAGGTAATTTTTCAGCa            <  1:536950/140‑1 (MQ=255)                                                                                                                           cgcggGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAGGTAATTTTTCAGCa            <  1:1072022/140‑1 (MQ=255)                                                                                                                           cgcggGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAGGTAATTTTTCAGCa            <  2:1376228/140‑1 (MQ=255)                                                                                                                           cgcggGGCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAGGTAATTTTTCAGCa            <  2:1611399/140‑1 (MQ=255)                                                                                                                           cgcggGGCGAGCCAGCCAGTTTCGCCACATCGCCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAGGTAATTTTTCAGCa            <  2:319662/140‑1 (MQ=255)                                                                                                                                ggCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAGGTAATTTTTCAGCATAATc       >  1:1399768/1‑140 (MQ=255)                                                                                                                                 gCGATCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAGGTAATTTTTCAGCATAATCt      <  2:1276608/140‑1 (MQ=255)                                                                                                                                     tCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAGGTAATTTTTCAGCATAATCTGGaa  >  1:803657/1‑140 (MQ=255)                                                                                                                                     tCCAGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAGGTAATTTTTCAGCATAATCTGGaa  >  1:1335161/1‑140 (MQ=255)                                                                                                                                        |                                                                                                                                         TCGCTGACGCTGTAAATCCGGTCCGGTTAGCGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAGGTAATTTTTCAGCATAATCTGGAA  >  NC_000913/476060‑476331

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑