| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,679,846 | C→A | P143Q (CCG→CAG) | kdgK → | 2‑dehydro‑3‑deoxygluconokinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,679,846 | 0 | C | A | 97.9% | 321.1 / 0.4 | 94 | P143Q (CCG→CAG) | kdgK | 2‑dehydro‑3‑deoxygluconokinase |
| Reads supporting (aligned to +/- strand): ref base C (1/1); new base A (51/41); total (52/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.31e-01 | |||||||||||
ACGTTCTACTACTGGCGGAACGAAGCCGCCGCCAAATTCTGGCTGGAGAGTGAGCAGTCTGCGGCGATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCCGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCCGCGCCTGTGGGCCAGCAAAGAAGAGACACAGCAGGTGTACCAACAAAT > NC_000913/3679713‑3679978 | aCGTTCTACTACTGGCGGAACGAAGCCGCCGCCAAATTCTGGCTGGAGAGTGAGCAGTCTGCGGCGATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAg > 2:865040/1‑140 (MQ=255) actactGGCGGAACGAAGCCGCCGCCAAATTCTGGCTGGAGAGTGAGCAGTCTGCGGCGATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGaa > 1:916008/1‑140 (MQ=255) actactGGCGGAACGAAGCCGCCGCCAAATTCTGGCTGGAGAGTGAGCAGTCTGCGGCGATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGaa < 1:1577701/140‑1 (MQ=255) ctGGCGGAACGAAGCCGCCGCCAAATTCTGGCTGGAGAGTGAGCAGTCTGCGGCGATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAgc > 2:1010472/1‑140 (MQ=255) ctGGCGGAACGAAGCCGCCGCCAAATTCTGGCTGGAGAGTGAGCAGTCTGCGGCGATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAgc > 2:478181/1‑140 (MQ=255) ctGGCGGAACGAAGCCGCCGCCAAATTCTGGCTGGAGAGTGAGCAGTCTGCGGCGATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAgc > 2:1492851/1‑140 (MQ=255) tGGCGGAACGAAGCCGCCGCCAAATTCTGGCTGGAGAGTGAGCAGTCTGCGGCGATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAgct < 2:213418/140‑1 (MQ=255) tGGCGGAACGAAGCCGCCGCCAAATTCTGGCTGGAGAGTGAGCAGTCTGCGGCGATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAgct < 2:1746569/140‑1 (MQ=255) tGGCGGAACGAAGCCGCCGCCAAATTCTGGCTGGAGAGTGAGCAGTCTGCGGCGATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAgct > 2:569361/1‑140 (MQ=255) gCGGAACGAAGCCGCCGCCAAATTCTGGCTGGAGAGTGAGCAGTCTGCGGCGATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAgctgc > 2:332945/1‑140 (MQ=255) gCGGAACGAAGCCGCCGCCAAATTCTGGCTGGAGAGTGAGCAGTCTGCGGCGATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAgctgc > 2:1713096/1‑140 (MQ=255) gCGGAACGAAGCCGCCGCCAAATTCTGGCTGGAGAGTGAGCAGTCTGCGGCGATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAgctgc > 2:1421930/1‑140 (MQ=255) gCGGAACGAAGCCGCCGCCAAATTCTGGCTGGAGAGTGAGCAGTCTGCGGCGATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAgctgc > 2:1340040/1‑140 (MQ=255) gCGGAACGAAGCCGCCGCCAAATTCTGGCTGGAGAGTGAGCAGTCTGCGGCGATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAgctgc > 2:1089909/1‑140 (MQ=255) gCGGAACGAAGCCGCCGCCAAATTCTGGCTGGAGAGTGAGCAGTCTGCGGCGATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAgct < 2:1028571/138‑1 (MQ=255) gCGGAACGAAGCCGCCGCCAAATTCTGGCTGGAGAGTGAGCAGTCTGCGGCGATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAgct < 2:100174/138‑1 (MQ=255) gCGGAACGAAGCCGCCGCCAAATTCTGGCTGGAGAGTGAGCAGTCTGCGGCGATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAgct > 1:100174/1‑138 (MQ=255) gCGGAACGAAGCCGCCGCCAAATTCTGGCTGGAGAGTGAGCAGTCTGCGGCGATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAgct > 1:1028571/1‑138 (MQ=255) ggAACGAAGCCGCCGCCAAATTCTGGCTGGAGAGTGAGCAGTCTGCGGCGATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCCGACCAGCCGCGAAAAGCTGCtt > 1:971883/1‑140 (MQ=255) ggAACGAAGCCGCCGCCAAATTCTGGCTGGAGAGTGAGCAGTCTGCGGCGATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCtt > 1:1553577/1‑140 (MQ=255) ggAACGAAGCCGCCGCCAAATTCTGGCTGGAGAGTGAGCAGTCTGCGGCGATTTGCGAAGAGCTGGCGAATTTCGA‑TATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCttt > 2:532715/1‑140 (MQ=255) aGCCGCCGCCAAATTCTGGCTGGAGAGTGAGCAGTCTGCGGCGATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCctgc > 2:579992/1‑140 (MQ=255) ccgccAAATTCTGGCTGGAGAGTGAGCAGTCTGCGGCGATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTgcgc > 2:38555/1‑140 (MQ=255) ccgccAAATTCTGGCTGGAGAGTGAGCAGTCTGCGGCGATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTgcgc > 2:547097/1‑140 (MQ=255) ccAAATTCTGGCTGGAGAGTGAGCAGTCTGCGGCGATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGaa < 2:501095/140‑1 (MQ=255) aaTTCTGGCTGGAGAGTGAGCAGTCTGCGGCGATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGc < 1:1834051/140‑1 (MQ=255) ctggctggAGAGTGAGCAGTCTGCGGCGATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCcgcg < 1:1089909/140‑1 (MQ=255) ggctggAGAGTGAGCAGTCTGCGGCGATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGcc < 2:1327482/140‑1 (MQ=255) gctggAGAGTGAGCAGTCTGCGGCGATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCa > 2:1811651/1‑140 (MQ=255) agagTGAGCAGTCTGCGGCGATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGcc < 1:591837/134‑1 (MQ=255) agagTGAGCAGTCTGCGGCGATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGcc > 2:591837/1‑134 (MQ=255) agagTGAGCAGTCTGCGGCGATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAAcggc > 1:1268046/1‑140 (MQ=255) aGCAGTCTGCGGCGATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGaaaa > 1:1521278/1‑140 (MQ=255) gCAGTCTGCGGCGATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCCGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAg < 2:971883/140‑1 (MQ=255) gCAGTCTGCGGCGATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAg < 1:1111494/140‑1 (MQ=255) tCTGCGGCGATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGAt > 2:1523347/1‑140 (MQ=255) tCTGCGGCGATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGAt > 1:565363/1‑140 (MQ=255) tCTGCGGCGATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGAt > 1:980609/1‑140 (MQ=255) tCTGCGGCGATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGAt > 2:1632562/1‑140 (MQ=255) cTGCGGCGATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGAtt > 2:1784835/1‑140 (MQ=255) tGCGGCGATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGAttt > 1:903945/1‑140 (MQ=255) tGCGGCGATTTGCGAAGAGCTGGCGAATTTCGA‑TATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGAtttt < 1:532715/140‑1 (MQ=255) gcggcgATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGAtttt > 2:1588786/1‑140 (MQ=255) gcggcgATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGAtttt < 2:1794018/140‑1 (MQ=255) cggcgATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTc < 2:1062099/140‑1 (MQ=255) ggcgATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCg < 1:1421930/140‑1 (MQ=255) ggcgATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCg > 2:255238/1‑140 (MQ=255) cgATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGAc < 2:618946/140‑1 (MQ=255) cgATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGAc > 2:1360454/1‑140 (MQ=255) cgATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGAc < 1:1492851/140‑1 (MQ=255) gCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTc > 1:1598337/1‑140 (MQ=255) cTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTcc > 2:866537/1‑140 (MQ=255) tGGCGAATTTCGATTATCTCTACCTGAGCGGGATTATCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCcg < 1:64089/140‑1 (MQ=255) tGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCcg < 1:1310388/140‑1 (MQ=255) ggCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCcgc < 1:1713096/140‑1 (MQ=255) gCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCcgcg > 2:418451/1‑140 (MQ=255) gCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCcgcg > 2:1436273/1‑140 (MQ=255) aTTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCCGCGCCtg < 1:546530/140‑1 (MQ=255) aTTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCCGCGCCtg < 1:865040/140‑1 (MQ=255) gATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCCGCGCCTGTGGGc < 1:1784835/140‑1 (MQ=255) gATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCCGCGCCTGTGGGc < 1:1811651/140‑1 (MQ=255) tctcTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCCGCGCCTGTGGGCCAGCa > 1:837711/1‑140 (MQ=255) tACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCCGCGCCTGTGGGCCAGCAaaga < 2:1521278/140‑1 (MQ=255) ccTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCCGCGCCTGTGGGCCAGCAaagaag > 2:185507/1‑140 (MQ=255) ccTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCCGCGCCTGTGGGCCAGCAaagaag < 1:255238/140‑1 (MQ=255) cTGAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCCGCGCCTGTGGGCCAGCAAagaaga < 2:837711/140‑1 (MQ=255) gAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCCGCGCCTGTGGGCCAGCAAAGAAgaga < 2:1598337/140‑1 (MQ=255) gAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCCGCGCCTGTGGGCCAGCAAAGAAgaga < 1:185507/140‑1 (MQ=255) gAGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCCGCGCCTGTGGGCCAGCAAAGAAgaga < 2:1268046/140‑1 (MQ=255) aGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCCGCGCCTGTGGGCCAGCAaag > 1:1785156/1‑133 (MQ=255) aGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCCGCGCCTGTGGGCCAGCAaag < 2:1785156/133‑1 (MQ=255) aGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCCGCGCCTGTGGGCCAGCAAAGAAgagaa > 1:1008337/1‑139 (MQ=255) aGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCCGCGCCTGTGGGCCAGCAAAGAAgaga < 1:214568/139‑1 (MQ=255) aGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCCGCGCCTGTGGGCCAGCAAAGAAgaga > 2:214568/1‑139 (MQ=255) aGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCCGCGCCTGTGGGCCAGCAAAGAAGAGac > 1:1000411/1‑140 (MQ=255) aGCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCCGCGCCTGTGGGCCAGCAAAGAAGAGac > 2:390365/1‑140 (MQ=255) gCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAGGTGATTTTCGACAATAACTATCGTCCGCGCCTGTGGGCCAGCAAAGAAGAGaca > 1:1147632/1‑140 (MQ=255) gCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCCGCGCCTGTGGGCCAGCAAAGAAGAGaca > 2:953944/1‑140 (MQ=255) gCGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCCGCGCCTGTGGGCCAGCAAAGAAGAGaca > 2:1173262/1‑140 (MQ=255) cGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCCGCGCCTGTGGGCCAGCAAAGAAGAGacac < 1:1559345/140‑1 (MQ=255) cGGGATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCCGCGCCTGTGGGCCAGCAAAGAAGAGacac < 2:903945/140‑1 (MQ=255) gggATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCCGCGCCTGTGGGCCAGCAAAGAAGAGAcaca < 2:1477532/140‑1 (MQ=255) gggATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCCGCGCCTGTGGGCCAGCAAAGAAGAGAcaca < 2:1021632/140‑1 (MQ=255) gggATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCCGCGCCTGTGGGCCAGCAAAGAAGAGAcaca < 1:38555/140‑1 (MQ=255) ggaaTTAGCTGGGCGTGCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCCGCGCCTGTGGGCCAGCAAAGAAGAGAcaca < 2:916008/137‑1 (MQ=255) gATTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCCGCGCCTGTGGGCCAGCAAAGAAGAGACAcagc < 1:478181/140‑1 (MQ=255) aTTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCCGCGCCTGTGGGCCAGCAAagaaga > 1:1080804/1‑131 (MQ=255) aTTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCCGCGCCTGTGGGCCAGCAAagaaga < 2:1080804/131‑1 (MQ=255) aTTAGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCCGCGCCTGTGGGCCAGCAAAGAAGAGACAcagca > 1:1246507/1‑140 (MQ=255) aGCCTGGCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCCGCGCCTGTGGGCCAGCAAAGAAGAGACACAGCAGgt < 1:1340040/140‑1 (MQ=255) gCGATCTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCCGCGCCTGTGGGCCAGCAAAGAAGAGACACAGCAGGTGTACca > 1:544364/1‑140 (MQ=255) cTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCCGCGCCTGTGGGCCAGCAAAGAAGAGACACAGCAGGTGTACCAACaaa > 2:1075242/1‑140 (MQ=255) cTTAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCCGCGCCTGTGGGCCAGCAAAGAAGAGACACAGCAGGTATACCAACaaa > 2:749517/1‑140 (MQ=255) ttAAGCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCCGCGCCTGTGGGCCAGCAAAGAAGAGACACAGCAGGTGTACCAACAAAt > 2:175180/1‑140 (MQ=255) gCCAGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCCGCGCCTGTGGGCCAGCAAAGAAGAGACAcagcag < 1:1707239/122‑1 (MQ=255) | ACGTTCTACTACTGGCGGAACGAAGCCGCCGCCAAATTCTGGCTGGAGAGTGAGCAGTCTGCGGCGATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCCGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCCGCGCCTGTGGGCCAGCAAAGAAGAGACACAGCAGGTGTACCAACAAAT > NC_000913/3679713‑3679978 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |