BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,988,106	G→T	E191* (GAA→TAA)	yqeH →	putative LuxR family transcriptional regulator YqeH

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,988,106	0	G	T	100.0%	579.1 / NA	159	E191* (GAA→TAA)	yqeH	putative LuxR family transcriptional regulator YqeH
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (87/72); total (87/72)

Only 100 of 159 total aligned reads displayed.

CATTTACCGGAGGTAACACATTAACTCAGATGGAATTCACCATAATGGGGTATATGGTTTCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCGAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGACCAGCCAGAATCATACTCTGTTTATACGGGCATTTATTGAAATGTCCGTATTTTATAAATA  >  NC_000913/2987969‑2988239

cATTTACCGGAGGTAACACATTAACTCAGATGGAATTCACCATAATGGGGTATATGGTTTCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTaa                                                                                                                                     <  1:550965/140‑1 (MQ=255)

   ttACCGGAGGTAACACATTAACTCAGATGGAATTCACCATAATGGGGTATATGGTTTCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAag                                                                                                                                  >  1:923795/1‑140 (MQ=255)

     aCCGGAGGTAACACATTAACTCAGATGGAATTCACCATAATGGGGCATATGGTTTCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAagag                                                                                                                                >  2:1697480/1‑140 (MQ=255)

         gAGGTAACACATTAACTCAGATGGAATTCACCATAATGGGGTATATGGTTTCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATg                                                                                                                            <  2:794824/140‑1 (MQ=255)

         gAGGTAACACATTAACTCAGATGGAATTCACCATAATGGGGTATATGGTTTCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATg                                                                                                                            >  1:664304/1‑140 (MQ=255)

            gTAACACATTAACTCAGATGGAATTCACCATAATGGGGTATATGGTTTCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGAGTACAAGCAACGAATCTAAAAGAGAATGggt                                                                                                                         >  2:447255/1‑140 (MQ=255)

              aaCACATTAACTCAGATGGAATTCACCATAATGGGGTATATGGTTTCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGggtgg                                                                                                                       <  1:102498/140‑1 (MQ=255)

               acacATTAACTCAGATGGAATTCACCATAATGGGGTATATGGTTTCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGggtggt                                                                                                                      >  2:410799/1‑140 (MQ=255)

                        cTCAGATGGAATTCACCATAATGGGGTATATGGTTTCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAAc                                                                                                             >  2:1415824/1‑140 (MQ=255)

                        cTCAGATGGAATTCACCATAATGGGGTATATGGTTTCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAAc                                                                                                             >  1:1464749/1‑140 (MQ=255)

                         tCAGATGGAATTCACCATAATGGGGTATATGGTTTCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACg                                                                                                            <  2:850383/140‑1 (MQ=255)

                         tCAGATGGAATTCACCATAATGGGGTATATGGTTTCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACg                                                                                                            <  1:1087948/140‑1 (MQ=255)

                          cAGATGGAATTCACCATAATGGGGTATATGGTTTCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGa                                                                                                           <  2:69402/140‑1 (MQ=255)

                           aGATGGAATTCACCATAATGGGGTATATGGTTTCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGaa                                                                                                          <  2:664304/140‑1 (MQ=255)

                           aGATGGAATTCACCATAATGGGGTATATGGTTTCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGAGATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGaa                                                                                                          >  2:1363468/1‑140 (MQ=255)

                               ggAATTCACCATAATGGGGTATATGGTTTCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGaa                                                                                                          >  1:1719876/1‑136 (MQ=255)

                               ggAATTCACCATAATGGGGTATATGGTTTCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGaa                                                                                                          <  2:1719876/136‑1 (MQ=255)

                                   ttCACCATAATGTGGTATATGGTTTCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAAttatttat                                                                                                  >  1:1107997/1‑140 (MQ=255)

                                        cATAATGGGGTATATGGTTTCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGtt                                                                                             >  2:791524/1‑140 (MQ=255)

                                           aaTGGGGTATATGGTTTCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTcac                                                                                          >  1:1092576/1‑140 (MQ=255)

                                           aaTGGGGTATATGGTTTCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTcac                                                                                          >  1:1683973/1‑140 (MQ=255)

                                           aaTGGGGTATATGGTTTCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTcac                                                                                          >  1:265/1‑140 (MQ=255)

                                             tGGGGTATATGGTTTCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACAt                                                                                        >  2:1674660/1‑140 (MQ=255)

                                              ggggTATATGGTTTCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACAtt                                                                                       <  1:872031/140‑1 (MQ=255)

                                                ggTATATGGTTTCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCg                                                                                     >  1:1260586/1‑140 (MQ=255)

                                                  tataTGGTTTCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACAtt                                                                                       >  2:282957/1‑136 (MQ=255)

                                                  tataTGGTTTCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACAtt                                                                                       <  1:282957/136‑1 (MQ=255)

                                                  tataTGGTTTCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGt                                                                                   <  2:851183/140‑1 (MQ=255)

                                                  tataTGGTTTCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGt                                                                                   <  1:1740514/140‑1 (MQ=255)

                                                   atatGGTTTCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTc                                                                                  <  1:706749/140‑1 (MQ=255)

                                                   atatGGTTTCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTc                                                                                  >  1:943888/1‑140 (MQ=255)

                                                    tatGGTTTCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTcc                                                                                 >  1:440123/1‑140 (MQ=255)

                                                    tatGGTTTCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTcc                                                                                 <  1:356338/140‑1 (MQ=255)

                                                    tatGGTTTCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTcc                                                                                 >  1:97287/1‑140 (MQ=255)

                                                    tatGGTTTCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTcc                                                                                 <  1:791524/140‑1 (MQ=255)

                                                     atGGTTTCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCa                                                                                >  1:8171/1‑140 (MQ=255)

                                                     atGGTTTCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCa                                                                                >  2:1044554/1‑140 (MQ=255)

                                                         tttCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATGTCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACAt                                                                            >  2:1361006/1‑140 (MQ=255)

                                                         tttCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACAt                                                                            >  2:550382/1‑140 (MQ=255)

                                                         tttCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACAt                                                                            >  1:1646721/1‑140 (MQ=255)

                                                         tttCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACAt                                                                            >  2:329136/1‑140 (MQ=255)

                                                          ttCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACAtt                                                                           >  2:1661214/1‑140 (MQ=255)

                                                          ttCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACAtt                                                                           >  1:1450591/1‑140 (MQ=255)

                                                          ttCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACAtt                                                                           >  1:991506/1‑140 (MQ=255)

                                                           tCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTg                                                                          >  2:695143/1‑140 (MQ=255)

                                                           tCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTg                                                                          >  1:1570330/1‑140 (MQ=255)

                                                            cTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGa                                                                         <  1:1385584/140‑1 (MQ=255)

                                                            cTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGa                                                                         <  1:1363468/140‑1 (MQ=255)

                                                              ggTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGa                                                                         <  2:276528/138‑1 (MQ=255)

                                                                      tCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGa                                                               <  2:1450591/140‑1 (MQ=255)

                                                                      tCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGa                                                               <  1:730865/140‑1 (MQ=255)

                                                                       ccATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGAc                                                              <  2:1646721/140‑1 (MQ=255)

                                                                           atCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGAccagc                                                          <  2:265/140‑1 (MQ=255)

                                                                             cAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGAccagcca                                                        <  1:410799/140‑1 (MQ=255)

                                                                             cAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGAGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGAccagcca                                                        <  1:447255/140‑1 (MQ=255)

                                                                              aGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGAccagccag                                                       >  2:1181962/1‑140 (MQ=255)

                                                                                aTTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGAccagc                                                          <  1:1097877/135‑1 (MQ=255)

                                                                                aTTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGAccagc                                                          >  2:1097877/1‑135 (MQ=255)

                                                                                aTTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGACCAGCCAGaa                                                     <  1:329136/140‑1 (MQ=255)

                                                                                aTTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGACCAGCCAGaa                                                     <  1:275436/140‑1 (MQ=255)

                                                                                 ttGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGAccagcca                                                        <  1:25876/136‑1 (MQ=255)

                                                                                  tGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGACCAGCCAGAATc                                                   >  1:542952/1‑140 (MQ=255)

                                                                                     tGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGACCAGCCAGAATCATa                                                <  1:1683150/140‑1 (MQ=255)

                                                                                      gAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGACCAGCCAGAATCATAc                                               <  2:426757/140‑1 (MQ=255)

                                                                                       aaGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGACCAGCCAGAATCATAct                                              <  2:1260586/140‑1 (MQ=255)

                                                                                         gTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGACCAGCCAGAATCATActct                                            <  2:1570330/140‑1 (MQ=255)

                                                                                         gTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGACCAGCCAGAATCATActct                                            >  2:1405522/1‑140 (MQ=255)

                                                                                            cTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGACCAGCCAGAATCATACTCTGtt                                         >  1:1186169/1‑140 (MQ=255)

                                                                                                atatggatatCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGACCAGCCAGAATCATACTCTGTTtata                                     <  2:1464749/140‑1 (MQ=255)

                                                                                                    ggatatCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGACCAGCCAGAATCATACTCTGTTTATACggg                                 >  1:1725146/1‑140 (MQ=255)

                                                                                                     gatatCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGACCAGCCAGAATCATACTCTGTTTATACGGGc                                <  1:1180962/140‑1 (MQ=255)

                                                                                                     gatatCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGACCAGCCAGAATCATACTCTGTTTATACGGGc                                <  2:1137751/140‑1 (MQ=255)

                                                                                                       tatCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGACCAGCCAGAATCATACTCTGTTTATACGGGCAt                              <  2:1723657/140‑1 (MQ=255)

                                                                                                       tatCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGACCAGCCAGAATCATACTCTGTTTATACGGGCAt                              <  2:1740573/140‑1 (MQ=255)

                                                                                                       tatCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGACCAGCCAGAATCATACTCTGTTTATACGGGCAt                              <  2:1797496/140‑1 (MQ=255)

                                                                                                         tCCGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGACCAGCCAGAATCATACTCTGTTTATACGGGCAt                              >  2:746889/1‑138 (MQ=255)

                                                                                                           cGTAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGACCAGCCAGAATCATACTCTGTTTATACGGGCATTTAt                          <  1:1661214/140‑1 (MQ=255)

                                                                                                             tAGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGACCAGCCAGAATCATACTCTGTTTATACGGGCATTTATTg                        >  2:1618577/1‑140 (MQ=255)

                                                                                                              aGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGACCAGCCAGAATCATACTCTGTTTATACGGGCATTTATTGa                       >  1:1026941/1‑140 (MQ=255)

                                                                                                              aGCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGACCAGCCAGAATCATACTCTGTTTATACGGGCATTTATTGa                       >  1:1654406/1‑140 (MQ=255)

                                                                                                               gCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGACCAGCCAGAATCATACTCTGTTTATACGGGCATTTATTGaa                      >  2:308535/1‑140 (MQ=255)

                                                                                                               gCATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGACCAGCCAGAATCATACTCTGTTTATACGGGCATTTATTGaa                      >  2:658872/1‑140 (MQ=255)

                                                                                                                cATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGACCAGCCAGAATCATACTCTGTTTATACGGGCATTTATTGaaa                     >  2:1830989/1‑140 (MQ=255)

                                                                                                                cATCTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGACCAGCCAGAATCATACTCTGTTTATACGGGCATTTATTGaaa                     >  1:315547/1‑140 (MQ=255)

                                                                                                                   cTACGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGACCAGCCAGAATCATACTCTGTTTATACGGGCATTTATTGAAATGt                  >  2:504011/1‑140 (MQ=255)

                                                                                                                     aCGCGTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGACCAGCCAGAATCATACTCTGTTTATACGGGCATTTATTGAAATGTcc                >  2:489132/1‑140 (MQ=255)

                                                                                                                       gcgTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGACCAGCCAGAATCATACTCTGTTTATACGGGCATTTATTGAAATGTCCGt              <  2:1307619/140‑1 (MQ=255)

                                                                                                                       gcgTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGACCAGCCAGAATCATACTCTGTTTATACGGGCATTTATTGAAATGTCCGt              <  1:669861/140‑1 (MQ=255)

                                                                                                                       gcgTACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGACCAGCCAGAATCATACTCTGTTTATACGGGCATTTATTGAAATGTCCGt              <  1:489132/140‑1 (MQ=255)

                                                                                                                          tACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGACCAGCCAGAATCATACTCTGTTTATACGGGCATTTATTGAAATGTCCGTAtt           >  1:216626/1‑140 (MQ=255)

                                                                                                                          tACAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGACCAGCCAGAATCATACTCTGTTTATACGGACATTTATTGAAATGTCCGTAtt           >  1:171719/1‑140 (MQ=255)

                                                                                                                            cAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGACCAGCCAGAATCATACTCTGTTTATACGGGCATTTATTGa                       <  2:1759787/126‑1 (MQ=255)

                                                                                                                            cAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGACCAGCCAGAATCATACTCTGTTTATACGGGCATTTATTGa                       >  1:1759787/1‑126 (MQ=255)

                                                                                                                            cAAGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGACCAGCCAGAATCATACTCTGTTTATACGGGCATTTATTGAAATGTCCGTAtttt         >  1:1846427/1‑140 (MQ=255)

                                                                                                                             aaGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGACCAGCCAGAATCATACTCTGTTTATACGGGCATTTATTGAAATGTCCGTATTTta        >  1:1516029/1‑140 (MQ=255)

                                                                                                                              aGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGACCAGCCAGAATCATACTCTGTTTATACGGGCATTTATTGAAATGTCCGTATTTtat       >  2:2682/1‑140 (MQ=255)

                                                                                                                              aGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACCCAACGACCAGCCAGAATCATACTCTGTTTATACGGGCATTTATTGAAATGTCCGTAtttt         <  2:1455072/138‑1 (MQ=255)

                                                                                                                              aGCAACGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACCCAACGACCAGCCAGAATCATACTCTGTTTATACGGGCATTTATTGAAATGTCCGTAtttt         >  1:1455072/1‑138 (MQ=255)

                                                                                                                                 aaCGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGACCAGCCAGAATCATACTCTGTTTATACGGGCATTTATTGAAATGTCCGTATTTTATaaa    <  2:906404/140‑1 (MQ=255)

                                                                                                                                  aCGAATCTAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGACCAGCCAGAATCATACTCTGTTTATACGGGCATTTATTGAAATGTCCGTATTTTATAAAt   <  2:1846427/140‑1 (MQ=255)

CATTTACCGGAGGTAACACATTAACTCAGATGGAATTCACCATAATGGGGTATATGGTTTCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCGAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGATACTCAACGACCAGCCAGAATCATACTCTGTTTATACGGGCATTTATTGAAATGTCCGTATTTTATAAATA  >  NC_000913/2987969‑2988239

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`