BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4288195 =	74 (0.700)	3 (0.030) +G	3/274	8.3	2.7%	coding (432/1437 nt)	nrfA	cytochrome c552 nitrite reductase
*	?	NC_000913	= 4556112	142 (1.340)	3 (0.030) +G	3/274	8.3	2.7%	coding (209/831 nt)	yjiC	uncharacterized protein YjiC
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 144 total aligned reads displayed.

CTTTTTACATATGCCACCATATATTTCGTCTAAAGCTGAGGTGATTTTCAAGTTCCGATAGAGCATACGTCCTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGTTTTCCGAATCCATGCGTGCATATTTTAATTTACGTGTAAACTCACTGTCGACTAT  >  NC_000913/4555973‑4556251

cTTTTTACATATGCCACCATATATTTCGTCTAAAGCTGAGGTGATTTTCAAGTTCCGATAGAGCATACGTCCTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTAc                                                                                                                                             >  2:1693874/1‑140 (MQ=255)

cTTTTTACATATGCCACCATATATTTCGTCTAAAGCTGAGGTGATTTTCAAGTTCCGATAGAGCATACGTCCTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTAc                                                                                                                                             <  2:747637/140‑1 (MQ=255)

   tttACATATGCCACCATATATTTCGTCTAAAGCTGAGGTGATTTTCAAGTTCCGATAGAGCATACGTCCTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTaa                                                                                                                                          >  1:1011041/1‑140 (MQ=255)

          atGCCACCATATATTTCGTCTAAAGCTGAGGTGATTTTCAAGTTCCGATAGAGCATACGTCCTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAg                                                                                                                                   <  2:231887/140‑1 (MQ=255)

            gCCACCATATATTTCGTCTAAAGCTGAGGTGATTTTCAAGTTCCGATAGAGCATACGTCCTGTTGTTGTAATATCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGtt                                                                                                                                 >  1:1028477/1‑140 (MQ=255)

            gCCACCATATATTTCGTCTAAAGCTGAGGTGATTTTCAAGTTCCGATAGAGCATACGTCCTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACt                                                                                                                                            >  2:184489/1‑129 (MQ=255)

            gCCACCATATATTTCGTCTAAAGCTGAGGTGATTTTCAAGTTCCGATAGAGCATACGTCCTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGtt                                                                                                                                 >  2:441431/1‑140 (MQ=255)

            gCCACCATATATTTCGTCTAAAGCTGAGGTGATTTTCAAGTTCCGATAGAGCATACGTCCTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGtt                                                                                                                                 >  2:374500/1‑140 (MQ=255)

              caccaTATATTTCGTCTAAAGCTGAGGTGATTTTCAAGTTCCGATAGAGCATACGTCCTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGtttt                                                                                                                               <  2:50307/140‑1 (MQ=255)

              caccaTATATTTCGTCTAAAGCTGAGGTGATTTTCAAGTTCCGATAGAGCATACGTCCTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGtttt                                                                                                                               <  1:672193/140‑1 (MQ=255)

               accaTATATTTCGTCTAAAGCTGAGGTGATTTTCAAGTTCCGATAGAGCATACGTCCTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTc                                                                                                                              >  2:548969/1‑140 (MQ=255)

                    atatTTCGTCTAAAGCTGAGGTGATTTTCAAGTTCCGATAGAGCATACGTCCTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAAtt                                                                                                                         >  1:1657369/1‑140 (MQ=255)

                        ttCGTCTAAAGCTGAGGTGATTTTCAAGTTCCGATAGAGCATACGTCCTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGa                                                                                                                     >  2:332636/1‑140 (MQ=255)

                         tCGTCTAAAGCTGAGGTGATTTTCAAGTTCCGATAGAGCATACGTCCTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGAc                                                                                                                    <  2:44918/140‑1 (MQ=255)

                         tCGTCTAAAGCTGAGGTGATTTTCAAGTTCCGATAGAGCATACGTCCTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGAc                                                                                                                    >  2:160648/1‑140 (MQ=255)

                          cGTCTAAAGCTGAGGTGATTTTCAAGTTCCGATAGAGCATACGTCCTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACa                                                                                                                   >  1:114407/1‑140 (MQ=255)

                          cGTCTAAAGCTGAGGTGATTTTCAAGTTCCGATAGAGCATACGTCCTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACa                                                                                                                   <  2:1444859/140‑1 (MQ=255)

                          cGTCTAAAGCTGAGGTGATTTTCAAGTTCCGATAGAGCATACGTCCTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACa                                                                                                                   <  1:441431/140‑1 (MQ=255)

                           gTCTAAAGCTGAGGTGATTTTCAAGTTCCGATAGAGCATACGTCCTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACaa                                                                                                                  >  1:1342274/1‑140 (MQ=255)

                           gTCTAAAGCTGAGGTGATTTTCAAGTTCCGATAGAGCATACGTCCTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACaa                                                                                                                  >  2:57435/1‑140 (MQ=255)

                            tCTAAAGCTGAGGTGATTTTCAAGTTCCGATAGAGCATACGTCCTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAAc                                                                                                                 >  2:671756/1‑140 (MQ=255)

                             cTAAAGCTGAGGTGATTTTCAAGTTCCGATAGAGCATACGTCCTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACg                                                                                                                <  1:830396/140‑1 (MQ=255)

                               aaaGCTGAGGTGATTTTCAAGTTCCGATAGAGCATACGTCCTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCt                                                                                                              >  2:956109/1‑140 (MQ=255)

                                 aGCTGAGGTGATTTTCAAGTTCCGATAGAGCATACGTCCTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCttt                                                                                                            >  2:1100490/1‑140 (MQ=255)

                                  gCTGAGGTGATTTTCAAGTTCCGATAGAGCATACGTCCTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCtttt                                                                                                           <  2:288081/140‑1 (MQ=255)

                                   cTGAGGTGATTTTCAAGTTCCGATAGAGCATACGTCCTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCttttt                                                                                                          <  2:1477937/140‑1 (MQ=255)

                                      aGGTGATTTTCAAGTTCCGATAGAGCATACGTCCTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTc                                                                                                         <  1:1320539/138‑1 (MQ=255)

                                      aGGTGATTTTCAAGTTCCGATAGAGCATACGTCCTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCa                                                                                                       >  2:192699/1‑140 (MQ=255)

                                      aGGTGATTTTCAAGTTCCGATAGAGCATACGTCCTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCa                                                                                                       >  1:532429/1‑140 (MQ=255)

                                       ggTGATTTTCAAGTTCCGATAGAGCATACGTCCTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCAt                                                                                                      <  2:1479535/140‑1 (MQ=255)

                                             tttCAAGTTCCGATAGAGCATACGTCCTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAAt                                                                                                <  1:939417/140‑1 (MQ=255)

                                              ttCAAGTTCCGATAGAGCATACGTCCTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAAtt                                                                                               >  1:1452559/1‑140 (MQ=255)

                                                cAAGTTCCGATAGAGCATACGTCCTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTAt                                                                                             >  1:804594/1‑140 (MQ=255)

                                                  aGTTCCGATAGAGCATACGTCCTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATgg                                                                                           >  1:1492988/1‑140 (MQ=255)

                                                  aGTTCCGATAGAGCATACGTCCTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATgg                                                                                           >  2:1296023/1‑140 (MQ=255)

                                                   gTTCCGATAGAGCATACGTCCTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGt                                                                                          <  2:532429/140‑1 (MQ=255)

                                                       cGATAGAGCATACGTCCTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTAtt                                                                                      <  2:309138/140‑1 (MQ=255)

                                                          tAGAGCATACGTCCTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGcc                                                                                   <  2:1756239/140‑1 (MQ=255)

                                                           agagCATACGTCCTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCa                                                                                  <  1:192699/140‑1 (MQ=255)

                                                                  aCGTCCTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTaa                                                                           <  2:1657369/140‑1 (MQ=255)

                                                                   cGTCCTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAag                                                                          <  1:548969/140‑1 (MQ=255)

                                                                   cGTCCTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAag                                                                          <  1:332636/140‑1 (MQ=255)

                                                                      ccTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAgg                                                                       <  2:1342274/140‑1 (MQ=255)

                                                                       cTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGc                                                                      >  2:1046506/1‑140 (MQ=255)

                                                                       cTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGc                                                                      >  1:321703/1‑140 (MQ=255)

                                                                             ttgtAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCgg                                                                    <  1:732298/136‑1 (MQ=255)

                                                                             ttgtAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCgg                                                                    >  2:732298/1‑136 (MQ=255)

                                                                              tgtAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCACGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAagat                                                               >  2:830075/1‑140 (MQ=255)

                                                                                  aTACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAagatagat                                                           >  2:1662732/1‑140 (MQ=255)

                                                                                    aCCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGt                                                         >  1:1766105/1‑140 (MQ=255)

                                                                                     ccATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCgg                                                                    >  2:1226806/1‑128 (MQ=255)

                                                                                       aTCGGATTCTCTGCATGCTCCTGTCACATAATTAGATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGtttt                                                      >  2:1235669/1‑140 (MQ=255)

                                                                                       aTCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGtttt                                                      <  1:849672/140‑1 (MQ=255)

                                                                                       aTCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGtttt                                                      >  1:791948/1‑140 (MQ=255)

                                                                                       aTCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGtttt                                                      >  1:438893/1‑140 (MQ=255)

                                                                                        tCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGc                                                                      >  1:844481/1‑123 (MQ=255)

                                                                                        tCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGc                                                                      <  2:844481/123‑1 (MQ=255)

                                                                                        tCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGTTTTc                                                     >  2:1174555/1‑140 (MQ=255)

                                                                                        tCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGTTTTc                                                     >  2:1252491/1‑140 (MQ=255)

                                                                                        tCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGTTTTc                                                     >  1:1227514/1‑140 (MQ=255)

                                                                                        tCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGTTTTc                                                     >  2:941300/1‑140 (MQ=255)

                                                                                         cGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGTTTTcc                                                    <  2:836319/140‑1 (MQ=255)

                                                                                                tctGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGTTTTCCGAATCCa                                             >  1:1153337/1‑140 (MQ=255)

                                                                                                  tGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGTTTTCCGAATCCATg                                           >  2:1528293/1‑140 (MQ=255)

                                                                                                  tGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGTTTTCCGAATCCATg                                           >  2:429224/1‑140 (MQ=255)

                                                                                                  tGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGTTTTCCGAATCCATg                                           >  1:1713950/1‑140 (MQ=255)

                                                                                                    cATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGTTTTCCGAATCCATGCg                                         >  2:1417876/1‑140 (MQ=255)

                                                                                                      tGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGTTTTCCGAATCCATGCGTg                                       >  2:1229158/1‑140 (MQ=255)

                                                                                                        cTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGTTTTCCGAATCCATGCGTGCa                                     >  1:247777/1‑140 (MQ=255)

                                                                                                           cTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGTTTTCCGAATCCATGCGTGCatat                                  <  2:666030/140‑1 (MQ=255)

                                                                                                            tGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGTTTTCCGAATCCATGCGTGCATAtt                                 >  1:373105/1‑140 (MQ=255)

                                                                                                            tGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGTTTTCCGAATCCATGCGTGCATAtt                                 >  2:1206749/1‑140 (MQ=255)

                                                                                                              tCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGTTTTCCGAATCCATGCGTGCATAtttt                               >  1:504886/1‑140 (MQ=255)

                                                                                                              tCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGTTTTCCGAATCCATGCGTGCATAtttt                               >  1:1289667/1‑140 (MQ=255)

                                                                                                                acaTAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGTTTTCCGAATCCATGCGTGCATATTTTaa                             >  2:197842/1‑140 (MQ=255)

                                                                                                                  aTAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGTTTTCCGAATCCATGCGTGCATATTTTAAtt                           <  1:1199640/140‑1 (MQ=255)

                                                                                                                  aTAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGTTTTCCGAATCCATGCGTGCATATTTTAAtt                           <  1:349145/140‑1 (MQ=255)

                                                                                                                   tAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGTTTTCCGAATCCATGCGTGCATATTTTAAttt                          >  2:497376/1‑140 (MQ=255)

                                                                                                                    aaTTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCTACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGTTTTCCGAATCCATGCGTGCATATTTTAATTTa                         <  1:1426033/140‑1 (MQ=255)

                                                                                                                    aaTTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGTTTTCCGAATCCATGCGTGCATATTTTAATTTa                         <  1:266564/140‑1 (MQ=255)

                                                                                                                    aaTTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGTTTTCCGAATCCATGCGTGCATATTTTAATTTa                         <  2:354307/140‑1 (MQ=255)

                                                                                                                     aTTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGTTTTCCGAATCCATGCGTGCATATTTTAATTTAc                        >  1:998302/1‑140 (MQ=255)

                                                                                                                      ttAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGTTTTCCGAATCCATGCGTGCATATTTTAATTTACg                       <  1:1719876/140‑1 (MQ=255)

                                                                                                                         aaTGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGTTTTCCGAATCCATGCGTGCATATTTTAATTTACgtgt                    <  2:1153337/140‑1 (MQ=255)

                                                                                                                          aTGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGCAAGAGGCGGGAAATAGACGTCTTCCGAATCCTTGCGTGCATATTTTAATTTACGTGTa                   >  2:1584928/1‑140 (MQ=255)

                                                                                                                            ggCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGTTTTCCGAATCCATGCGTGCATATTTTAAtt                           <  1:418811/130‑1 (MQ=255)

                                                                                                                              ccAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGTTTTCCGAATCCATGCGTGCATATTTTAATTTACGTGTAAACt               >  1:192165/1‑140 (MQ=255)

                                                                                                                              ccAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGTTTTCCGAATCCATGCGTGCATATTTTAATTTACGTGTAAACt               >  1:660480/1‑140 (MQ=255)

                                                                                                                              ccAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGTTTTCCGAATCCATGCGTGCATATTTTAATTTACGTGTAAACt               >  1:6583/1‑140 (MQ=255)

                                                                                                                                aaGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGTTTTCCGAATCCATGCGTGCATATTTTAATTTACGTGTAAACTCa             <  1:1528293/140‑1 (MQ=255)

                                                                                                                                aaGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGTTTTCCGAATCCATGCGTGCATATTTTAATTTACGTGTAAACTCa             <  2:247777/140‑1 (MQ=255)

                                                                                                                                aaGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGTTTTCCGAATCCATGCGTGCATATTTTAATTTACGTGTAAACTCa             <  1:1229158/140‑1 (MQ=255)

                                                                                                                                  ggCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGTTTTCCGAATCCATGCGTGCATATTTTAATTTACGTGTAAACTCACt           <  1:1693874/140‑1 (MQ=255)

                                                                                                                                  ggCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGTTTTCCGAATCCATGCGTGCATATTTTAATTTACGTGTAAACTCACt           >  2:1288901/1‑140 (MQ=255)

                                                                                                                                       tttACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGTTTTCCGAATCCATGCGTGCATATTTTAATTTACGTGTAAACTCACTGTCGa      >  2:1689096/1‑140 (MQ=255)

                                                                                                                                       tttACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGTTTTCCGAATCCATGCGTGCATATTTTAATTTACGTGTAAACTCACTGTCGa      >  1:282686/1‑140 (MQ=255)

                                                                                                                                        ttACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGTTTTCCGAATCCATGCGTGCATATTTTAATTTACGTGTAAACTCACTGTCGAc     <  2:637727/140‑1 (MQ=255)

                                                                                                                                        ttACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGTTTTCCGAATCCATGCGTGCATATTTTAATTTACGTGTAAACTCACTGTCGAc     <  2:294270/140‑1 (MQ=255)

                                                                                                                                        ttACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGTTTTCCGAATCCATGCGTGCATATTTTAATTTACGTGTAAACTCACTGTCGAc     >  1:294270/1‑140 (MQ=255)

                                                                                                                                         tACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGTTTTCCGAATCCATGCGTGCATATTTTAATTTACGTGTAAACTCACTGTCGACt    <  2:273372/140‑1 (MQ=255)

CTTTTTACATATGCCACCATATATTTCGTCTAAAGCTGAGGTGATTTTCAAGTTCCGATAGAGCATACGTCCTGTTGTTGTAATACCATCGGATTCTCTGCATGCTCCTGTCACATAATTAAATGGCCAAGGCTCTTTACTAATATCAAGTTTTCTAATTTCGACAACGCTTTTTCCATCGTAATTATGGTTATTGCCACGAGTAAGAGGCGGAAGATAGATGTTTTCCGAATCCATGCGTGCATATTTTAATTTACGTGTAAACTCACTGTCGACTAT  >  NC_000913/4555973‑4556251

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.