BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,189,950	G→T	G166G (GGC→GGA)	phoP ←	DNA‑binding transcriptional dual regulator PhoP

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,189,950	0	G	T	100.0%	452.1 / NA	126	G166G (GGC→GGA)	phoP	DNA‑binding transcriptional dual regulator PhoP
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (54/72); total (54/72)

Only 100 of 130 total aligned reads displayed.

GTGGTAATCACTTCTTGGGGATATTGTGCCTGAATTTTTTTGCGCAGACGTCCCATCAGTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTGCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAACGGGGGGAGCGAAATGACCTGTGAAGCCAGAC  >  NC_000913/1189813‑1190086

     aaTCACTTCTTGGGGATATTGTGCCTGAATTTTTTTGCGCAGACGTCCCATCAGTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCattat                                                                                                                                   <  1:468592/140‑1 (MQ=255)

      aTCACTTCTTGGGGATATTGTGCCTGAATTTTTTTGCGCAGACGTCCCATCAGTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCattatt                                                                                                                                  <  1:665209/140‑1 (MQ=255)

       tCACTTCTTGGGGATATTGTGCCTGAATTTTTTTGCGCAGACGTCCCATCAGTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTg                                                                                                                                 >  2:763198/1‑140 (MQ=255)

           ttcttGGGGATATTGTGCCTGAATTTTTTTGCGCAGACGTCCCATCAGTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTa                                                                                                                             >  2:234861/1‑140 (MQ=255)

           ttcttGGGGATATTGTGCCTGAATTTTTTTGCGCAGACGTCCCATCAGTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTa                                                                                                                             >  2:1222699/1‑140 (MQ=255)

             cttGGGGATATTGTGCCTGAATTTTTTTGCGCAGACGTCCCATCAGTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATc                                                                                                                           >  1:1027604/1‑140 (MQ=255)

             cttGGGGATATTGTGCCTGAATTTTTTTGCGCAGACGTCCCATCAGTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATc                                                                                                                           <  1:1824426/140‑1 (MQ=255)

             cttGGGGATATTGTGCCTGAATTTTTTTGCGCAGACGTCCCATCAGTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATc                                                                                                                           >  1:1952334/1‑140 (MQ=255)

             cttGGGGATATTGTGCCTGAATTTTTTTGCGCAGACGTCCCATCAGTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATc                                                                                                                           >  1:1212335/1‑140 (MQ=255)

                ggggATATTGTGCCTGAATTTTTTTGCGCAGACGTCCCATCAGTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAAc                                                                                                                        <  2:1737674/140‑1 (MQ=255)

                ggggATATTGTGCCTGAATTTTTTTGCGCAGACGTCCCATCAGTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAAc                                                                                                                        <  2:1788993/140‑1 (MQ=255)

                ggggATATTGTGCCTGAATTTTTTTGCGCAGACGTCCCATCAGTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAAc                                                                                                                        <  1:930327/140‑1 (MQ=255)

                ggggATATTGTGCCTGAATTTTTTTGCGCAGACGTCCCATCAGTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAAc                                                                                                                        <  1:784546/140‑1 (MQ=255)

                ggggATATTGTGCCTGAATTTTTTTGCGCAGACGTCCCATCAGTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAAc                                                                                                                        <  1:56165/140‑1 (MQ=255)

                ggggATATTGTGCCTGAATTTTTTTGCGCAGACGTCCCATCAGTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAAc                                                                                                                        >  2:568623/1‑140 (MQ=255)

                ggggATATTGTGCCTGAATTTTTTTGCGCAGACGTCCCATCAGTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAAc                                                                                                                        <  2:725326/140‑1 (MQ=255)

                ggggATATTGTGCCTGAATTTTTTTGCGCAGACGTCCCATCAGTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAAc                                                                                                                        <  1:1938319/140‑1 (MQ=255)

                ggggATATTGTGCCTGAATTTTTTTGCGCAGACGTCCCATCAGTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAAc                                                                                                                        <  2:869963/140‑1 (MQ=255)

                ggggATATTGTGCCTGAATTTTTTTGCGCAGACGTCCCATCAGTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAAc                                                                                                                        >  1:1645365/1‑140 (MQ=255)

                ggggATATTGTGCCTGAATTTTTTTGCGCAGACGTCCCATCAGTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAAc                                                                                                                        <  1:1247303/140‑1 (MQ=255)

                ggggATATTGTGCCTGAATTTTTTTGCGCAGACGTCCCATCAGTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAAc                                                                                                                        <  1:1222699/140‑1 (MQ=255)

                  ggATATTGTGCCTGAATTTTTTTGCGCAGACGTCCCATCAGTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGt                                                                                                                      <  1:234861/140‑1 (MQ=255)

                  ggATATTGTGCCTGAATTTTTTTGCGCAGACGTCCCATCAGTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGt                                                                                                                      <  2:1442266/140‑1 (MQ=255)

                    atatTGTGCCTGAATTTTTTTGCGCAGACGTCCCATCAGTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGttt                                                                                                                    <  1:1070403/140‑1 (MQ=255)

                    atatTGTGCCTGAATTTTTTTGCGCAGACGTCCCATCAGTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGttt                                                                                                                    <  1:763198/140‑1 (MQ=255)

                    atatTGTGCCTGAATTTTTTTGCGCAGACGTCCCATCAGTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGttt                                                                                                                    <  1:2109853/140‑1 (MQ=255)

                    atatTGTGCCTGAATTTTTTTGCGCAGACGTCCCATCAGTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGttt                                                                                                                    <  2:1027604/140‑1 (MQ=255)

                     tatTGTGCCTGAATTTTTTTGCGCAGACGTCCCATCAGTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGt                                                                                                                              <  1:2067404/129‑1 (MQ=255)

                     tatTGTGCCTGAATTTTTTTGCGCAGACGTCCCATCAGTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGt                                                                                                                              >  2:2067404/1‑129 (MQ=255)

                     tatTGTGCCTGAATTTTTTTGCGCAGACGTCCCATCAGTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTc                                                                                                                   <  1:1523887/140‑1 (MQ=255)

                     tatTGTGCCTGAATTTTTTTGCGCAGACGTCCCATCAGTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTc                                                                                                                   >  1:317857/1‑140 (MQ=255)

                          tgCCTGAATTTTTTTGCACAGACGTCCCATCAGTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCataa                                                                                                              <  2:1236355/140‑1 (MQ=255)

                            ccTGAATTTTTTTGCGCAGACGTCCCATCAGTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCataata                                                                                                            >  1:156763/1‑140 (MQ=255)

                                aaTTTTTTTGCGCAGACGTCCCATCAGTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAgtgt                                                                                                        >  2:370315/1‑140 (MQ=255)

                                            cAGACGTCCCATCAGTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCgg                                                                                            <  1:331933/140‑1 (MQ=255)

                                              gACGTCCCATCAGTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTc                                                                                          <  2:1631291/140‑1 (MQ=255)

                                              gACGTCCCATCAGTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTc                                                                                          <  1:370315/140‑1 (MQ=255)

                                              gACGTCCCATCAGTACATAAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTc                                                                                          <  1:1308594/140‑1 (MQ=255)

                                                 gTCCCATCAGTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGt                                                                                       <  2:1142724/140‑1 (MQ=255)

                                                 gTCCCATCAGTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGt                                                                                       <  1:523322/140‑1 (MQ=255)

                                                         aGTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCAc                                                                               >  2:330438/1‑140 (MQ=255)

                                                          gTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACt                                                                              <  1:1185340/140‑1 (MQ=255)

                                                          gTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACt                                                                              <  2:1952334/140‑1 (MQ=255)

                                                          gTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACt                                                                              <  1:1383540/140‑1 (MQ=255)

                                                          gTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACt                                                                              <  1:1860267/140‑1 (MQ=255)

                                                          gTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACt                                                                              <  2:2064705/140‑1 (MQ=255)

                                                          gTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACt                                                                              <  1:1257439/140‑1 (MQ=255)

                                                           tACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACtt                                                                             >  2:1465920/1‑140 (MQ=255)

                                                            aCATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTc                                                                            <  1:568623/140‑1 (MQ=255)

                                                             cATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCg                                                                           >  1:1145297/1‑140 (MQ=255)

                                                             cATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCg                                                                           >  2:1255387/1‑140 (MQ=255)

                                                             cATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACNTTNCCATTATTGCGTATCAANGTNTNCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCg                                                                           >  2:1513973/1‑140 (MQ=255)

                                                              aTCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGt                                                                          <  2:1906472/140‑1 (MQ=255)

                                                              aTCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGt                                                                          <  2:1560276/140‑1 (MQ=255)

                                                              aTCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGt                                                                          <  1:36324/140‑1 (MQ=255)

                                                                 aaTGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCAt                                                                       <  1:756899/140‑1 (MQ=255)

                                                                 aaTGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCAt                                                                       <  1:1723543/140‑1 (MQ=255)

                                                                   tGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCa                                                                        >  1:96713/1‑137 (MQ=255)

                                                                   tGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTa                                                                     >  2:539421/1‑140 (MQ=255)

                                                                   tGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTa                                                                     <  1:1299778/140‑1 (MQ=255)

                                                                   tGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTa                                                                     >  1:447851/1‑140 (MQ=255)

                                                                     gTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAAt                                                                   >  2:427314/1‑140 (MQ=255)

                                                                     gTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAAt                                                                   >  1:2146552/1‑140 (MQ=255)

                                                                     gTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAAt                                                                   >  2:1883772/1‑140 (MQ=255)

                                                                     gTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAAt                                                                   >  1:1354594/1‑140 (MQ=255)

                                                                     gTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAAt                                                                   >  1:268085/1‑140 (MQ=255)

                                                                     gTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGCGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAAt                                                                   >  1:1486553/1‑140 (MQ=255)

                                                                     gTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACATTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAAt                                                                   >  2:748447/1‑140 (MQ=255)

                                                                        tGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGa                                                                >  1:1130565/1‑140 (MQ=255)

                                                                        tGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGa                                                                >  2:1653133/1‑140 (MQ=255)

                                                                        tGGCTTTCCCGCAGCTCCACATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGa                                                                >  2:737890/1‑140 (MQ=255)

                                                                         ggCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGAt                                                               >  2:1522751/1‑140 (MQ=255)

                                                                             ttCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTa                                                                     <  1:1026751/130‑1 (MQ=255)

                                                                             ttCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTa                                                                     >  2:1026751/1‑130 (MQ=255)

                                                                             ttCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAAtt                                                           >  1:867981/1‑140 (MQ=255)

                                                                              tCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTc                                                          >  1:435927/1‑140 (MQ=255)

                                                                               cccGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCa                                                         <  1:165462/140‑1 (MQ=255)

                                                                               cccGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCa                                                         >  1:2082083/1‑140 (MQ=255)

                                                                                  gCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACgg                                                      <  1:1590947/140‑1 (MQ=255)

                                                                                  gCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACgg                                                      <  2:1255522/140‑1 (MQ=255)

                                                                                  gCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACgg                                                      <  1:929912/140‑1 (MQ=255)

                                                                                  gCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACgg                                                      <  2:2082083/140‑1 (MQ=255)

                                                                                  gCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACgg                                                      <  2:447851/140‑1 (MQ=255)

                                                                                       tCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCgaga                                                 <  2:59548/140‑1 (MQ=255)

                                                                                         cGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCgag                                                  >  2:2187696/1‑137 (MQ=255)

                                                                                         cGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCgag                                                  <  1:2187696/137‑1 (MQ=255)

                                                                                                          ggAGCATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAACggg                              >  2:1622244/1‑140 (MQ=255)

                                                                                                              cATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAACGTGGGGa                          <  2:1645365/140‑1 (MQ=255)

                                                                                                              cATTAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAACGGGGGGa                          <  2:867981/140‑1 (MQ=255)

                                                                                                                ttAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAACGGGGGGAGc                        >  2:179785/1‑140 (MQ=255)

                                                                                                                ttAACGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAACGGGGGGAGc                        <  1:1883772/140‑1 (MQ=255)

                                                                                                                  aaCGAATCTTTGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAACGGGGGGAGCGa                      >  2:1369295/1‑140 (MQ=255)

                                                                                                                           ttGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAACGGGGGGAGCGAAATGACCtg             <  2:268085/140‑1 (MQ=255)

                                                                                                                            tGCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAACGGGGGGAGCGAAATGACCtgt            <  1:1829676/140‑1 (MQ=255)

                                                                                                                             gCTGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAACGGGGGGAGCGAAATGACCtgtg           >  1:28322/1‑140 (MQ=255)

                                                                                                                               tGACCACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAACGGGGGGAGCGAAATGACCTGTGaa         >  1:1875700/1‑140 (MQ=255)

                                                                                                                                   cACTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAACGGGGGGAGCGAAATGACCTGTGAAGCCa     <  2:435927/140‑1 (MQ=255)

                                                                                                                                     cTTTTCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAACGGGGGGAGCGAAATGACCTGTGAAGCCAGa   <  1:2050973/140‑1 (MQ=255)

                                                                                                                                      ttttCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAACGGGGGGAGCGAAATGACCTGTGAAGCCAGAc  <  1:2189477/140‑1 (MQ=255)

                                                                                                                                      ttttCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAACGGGGGGAGCGAAATGACCTGTGAAGCCAGAc  <  1:1522751/140‑1 (MQ=255)

GTGGTAATCACTTCTTGGGGATATTGTGCCTGAATTTTTTTGCGCAGACGTCCCATCAGTACATCAATGGTATGGCTTTCCCGCAGCTCCGCATCCGGATAGAGTTGGAGCATTAACGAATCTTTGCTGACCACTTTGCCATTATTGCGTATCAACGTTTCCATAATAGTGTATTCGAACGCGGTCAGTTTGATCACTTCGTCATTAATAGATAATTCACGGCGAGAGAGATCAACCTGAAACGGGGGGAGCGAAATGACCTGTGAAGCCAGAC  >  NC_000913/1189813‑1190086

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`