BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,820,245	G→T	A309D (GCT→GAT)	ligB ←	DNA ligase B

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,820,245	0	G	T	100.0%	368.0 / NA	104	A309D (GCT→GAT)	ligB	DNA ligase B
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (56/48); total (56/48)

Only 100 of 105 total aligned reads displayed.

GCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGAGCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCATCGGTGACGAAGGGTAATTCCGCTTTCCACCACT  >  NC_000913/3820108‑3820374

gCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCt                                                                                                                                 >  2:969740/1‑140 (MQ=255)

     cgcCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAgg                                                                                                                            >  1:245699/1‑140 (MQ=255)

     cgcCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAgg                                                                                                                            <  2:1005853/140‑1 (MQ=255)

        cTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTAcctgtct                                                                                                                         >  2:87828/1‑134 (MQ=255)

          gACGGACCAAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGat                                                                                                                       <  2:1319544/140‑1 (MQ=255)

          gACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGat                                                                                                                       <  1:285438/140‑1 (MQ=255)

          gACGGAACCAATATTCACCCGCTCGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGat                                                                                                                       >  1:1253037/1‑140 (MQ=255)

                 ccAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCa                                                                                                                <  1:1079222/140‑1 (MQ=255)

                    atatTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGc                                                                                                             <  2:800347/140‑1 (MQ=255)

                    atatTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGc                                                                                                             <  1:1362512/140‑1 (MQ=255)

                          aCCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAg                                                                                                       >  1:418636/1‑140 (MQ=255)

                          aCCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAg                                                                                                       >  2:756563/1‑140 (MQ=255)

                            ccGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGcc                                                                                                     >  1:331770/1‑140 (MQ=255)

                            ccGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGcc                                                                                                     >  1:1374614/1‑140 (MQ=255)

                              gCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCAc                                                                                                   <  2:1374614/140‑1 (MQ=255)

                               cTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCagc                                                                                                  >  1:838498/1‑138 (MQ=255)

                               cTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCAct                                                                                                  >  1:683880/1‑140 (MQ=255)

                               cTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCAct                                                                                                  >  1:610914/1‑140 (MQ=255)

                               cTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCAct                                                                                                  >  1:490352/1‑140 (MQ=255)

                                tGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCActc                                                                                                 >  2:1276498/1‑140 (MQ=255)

                                    cTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGcc                                                                                             <  2:331770/140‑1 (MQ=255)

                                         ttATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGcc                                                                                        <  1:1395704/140‑1 (MQ=255)

                                         ttATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGcc                                                                                        <  1:1276498/140‑1 (MQ=255)

                                           atcatcCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCg                                                                                      <  1:969740/140‑1 (MQ=255)

                                           atcatcCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCg                                                                                      <  1:128830/140‑1 (MQ=255)

                                            tcatcCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCgg                                                                                     <  2:418636/140‑1 (MQ=255)

                                            tcatcCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCgg                                                                                     >  1:279534/1‑140 (MQ=255)

                                              atcCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTa                                                                                   >  2:816413/1‑140 (MQ=255)

                                                      tGACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATgg                                                                           >  1:997086/1‑140 (MQ=255)

                                                       gACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGc                                                                          <  1:1210634/140‑1 (MQ=255)

                                                        ccAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCACCCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCg                                                                         <  1:253446/139‑1 (MQ=255)

                                                        aCAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCg                                                                         <  2:610914/140‑1 (MQ=255)

                                                        aCAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCg                                                                         <  1:756563/140‑1 (MQ=255)

                                                         cAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCgg                                                                        >  1:113480/1‑140 (MQ=255)

                                                            gTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGAt                                                                     >  1:550402/1‑140 (MQ=255)

                                                            gTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGAt                                                                     >  2:675195/1‑140 (MQ=255)

                                                            ctGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGAt                                                                     >  2:1090706/2‑140 (MQ=255)

                                                             tGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGAtt                                                                    >  1:981076/1‑140 (MQ=255)

                                                              gCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGTTAGCCAATGGCGGGATTc                                                                   >  1:755766/1‑140 (MQ=255)

                                                              gCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTc                                                                   >  1:280571/1‑140 (MQ=255)

                                                               cGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCt                                                                  <  2:113480/140‑1 (MQ=255)

                                                                gAGTGACGCAATCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTg                                                                 >  1:1009438/1‑140 (MQ=255)

                                                                 aGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTgg                                                                >  2:1346782/1‑140 (MQ=255)

                                                                 aGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTgg                                                                >  1:981875/1‑140 (MQ=255)

                                                                 aGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACCCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTgg                                                                >  2:415478/1‑140 (MQ=255)

                                                                  gTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGc                                                               <  2:683880/140‑1 (MQ=255)

                                                                      cGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCtt                                                           >  1:1484022/1‑140 (MQ=255)

                                                                       gCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCttt                                                          >  2:1244572/1‑140 (MQ=255)

                                                                       gCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCttt                                                          >  2:976850/1‑140 (MQ=255)

                                                                           tcaccGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTcgcc                                                      <  2:1009438/139‑1 (MQ=255)

                                                                           ccaccGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGTTAGCCAATGGCGGGATTCTGGCTCTTTcgcc                                                      <  2:755766/140‑1 (MQ=255)

                                                                           ccaccGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGAtt                                                                    >  2:302443/1‑126 (MQ=255)

                                                                           ccaccGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGAtt                                                                    <  1:302443/126‑1 (MQ=255)

                                                                           ccaccGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTcgcc                                                      <  1:1247702/140‑1 (MQ=255)

                                                                           ccaccGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTcgcc                                                      >  2:181966/1‑140 (MQ=255)

                                                                           ccaccGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTcgcc                                                      <  2:279534/140‑1 (MQ=255)

                                                                           ccaccGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTcgcc                                                      <  2:280571/140‑1 (MQ=255)

                                                                           ccaccGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTcgcc                                                      <  1:1346782/140‑1 (MQ=255)

                                                                           ccaccGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTcgcc                                                      <  2:588190/140‑1 (MQ=255)

                                                                            caccGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTcgccg                                                     <  2:490352/140‑1 (MQ=255)

                                                                            caccGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTcgccg                                                     <  2:981076/140‑1 (MQ=255)

                                                                            caccGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTcgccg                                                     <  1:1244572/140‑1 (MQ=255)

                                                                            caccGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTcgccg                                                     <  1:181966/140‑1 (MQ=255)

                                                                              ccGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCt                                                   >  1:1092732/1‑140 (MQ=255)

                                                                              ccGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCt                                                   <  2:147011/140‑1 (MQ=255)

                                                                                 atatTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTTTTTCGCCGCTCGt                                                <  1:301817/140‑1 (MQ=255)

                                                                                   atTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTAc                                              <  1:618058/140‑1 (MQ=255)

                                                                                       tACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACt                                          >  1:885189/1‑140 (MQ=255)

                                                                                        aCCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTa                                         >  1:349602/1‑140 (MQ=255)

                                                                                         ccGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTAc                                        >  1:266627/1‑140 (MQ=255)

                                                                                          cGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACg                                       <  2:1253037/140‑1 (MQ=255)

                                                                                                 aCCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCATCgg                                >  2:589324/1‑140 (MQ=255)

                                                                                                      ccGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCATCGGTGACg                           <  2:245699/140‑1 (MQ=255)

                                                                                                       cGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCATCg                                 >  1:1294229/1‑133 (MQ=255)

                                                                                                       cGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCATCg                                 <  2:1294229/133‑1 (MQ=255)

                                                                                                       cGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCATCGGTGACGa                          >  2:1189207/1‑140 (MQ=255)

                                                                                                       cGCAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCATCGGTGACGa                          >  2:123792/1‑140 (MQ=255)

                                                                                                         cAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCATCGGTGACGAAg                        >  2:681852/1‑140 (MQ=255)

                                                                                                         cAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCATCGGTGACGAAg                        >  2:284850/1‑140 (MQ=255)

                                                                                                         cAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCATCGGTGACGAAg                        >  2:1294653/1‑140 (MQ=255)

                                                                                                         cAAACTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACCCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCATCGGTGACGAAg                        <  1:415478/140‑1 (MQ=255)

                                                                                                           aaCTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCATCGGTGACGAAggg                      >  1:1440121/1‑140 (MQ=255)

                                                                                                            aCTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCATCGGTGACGAAGGGt                     >  1:635419/1‑140 (MQ=255)

                                                                                                            aCTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCCCTCGTACAACTACGCCATCGGTGACGAAGGGt                     >  1:741186/1‑140 (MQ=255)

                                                                                                             cTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCTCCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCATCgg                                <  2:1490822/128‑1 (MQ=255)

                                                                                                             cTGAATTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCTCCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCATCgg                                >  1:1490822/1‑128 (MQ=255)

                                                                                                                 aTTGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCATCGGTGACGAAGGGTAATTc                >  1:446041/1‑140 (MQ=255)

                                                                                                                   tGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCATCGGTGACGAAGGGTAATTCCg              <  2:550402/140‑1 (MQ=255)

                                                                                                                   tGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCATCGGTGACGAAGGGTAATTCCg              <  2:719112/140‑1 (MQ=255)

                                                                                                                   tGCCTTCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCATCGGTGACGAAGGGTAATTCCg              <  2:981875/140‑1 (MQ=255)

                                                                                                                        tCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCATCGGTGACGAAGGGTAATTCCg              <  2:793441/135‑1 (MQ=255)

                                                                                                                        tCACTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCATCGGTGACGAAGGGTAATTCCg              >  1:793441/1‑135 (MQ=255)

                                                                                                                          aCTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCATCGGTGACGAAGGGTAATTCCGCTTTcca       >  1:208543/1‑140 (MQ=255)

                                                                                                                           cTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCATCGGTGACGAAGGGTAATTCCGCTTTccac      <  2:1069448/140‑1 (MQ=255)

                                                                                                                           cTTCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCATCGGTGACGAAGGGTAATTCCGCTTTccac      <  1:976850/140‑1 (MQ=255)

                                                                                                                             tCGGCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCATCGGTGACGAAGGGTAATTCCGCTTTccacca    <  2:208543/140‑1 (MQ=255)

                                                                                                                               ggCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGGTTCTGGCTCTTTCGCCGCTCGTACAACTACGCCCTCGGTGACGAAGGGGAATTCCGCTTTCcaccacc  >  2:423488/1‑139 (MQ=255)

                                                                                                                               ggCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCATCGGTGACGAAGGGTAATTCCGCTTTccac      >  1:449858/1‑136 (MQ=255)

                                                                                                                               ggCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCATCGGTGACGAAGGGTAATTCCGCTTTCCACCACt  >  2:1021553/1‑140 (MQ=255)

                                                                                                                               ggCAACCTGATCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCCCGTACAACTACGCCATCGGGGACGAAGGGTAATTCCGCTTTCcaccacc  >  2:750490/1‑139 (MQ=255)

GCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTACCGCTCTTACCCACCGCAAACTGAATTGCCTTCACTTCGGCAACCTGAGCTACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCATCGGTGACGAAGGGTAATTCCGCTTTCCACCACT  >  NC_000913/3820108‑3820374

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`