BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,050,671	G→T	intergenic (+141/+292)	insB‑4 → / ← cspH	IS1 protein InsB/CspA family protein CspH

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,050,671	0	G	T	100.0%	347.3 / NA	98	intergenic (+141/+292)	insB‑4/cspH	IS1 protein InsB/CspA family protein CspH
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (55/43); total (55/43)

Only 100 of 102 total aligned reads displayed.

GGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAAGATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCTATTAATTATTGTTGGTAATATAGTTTCAAGTGGTA  >  NC_000913/1050534‑1050801

ggAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAaatataatat                                                                                                                                  >  1:112222/1‑140 (MQ=255)

ggAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAaatataatat                                                                                                                                  >  2:781866/1‑140 (MQ=255)

ggAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAaatataatat                                                                                                                                  >  2:297442/1‑140 (MQ=255)

ggAGCCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAaatataatat                                                                                                                                  >  1:771704/1‑140 (MQ=255)

      aTTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTaa                                                                                                                            >  2:283701/1‑140 (MQ=255)

        tACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACt                                                                                                                          >  1:364132/1‑140 (MQ=255)

           cGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATc                                                                                                                       <  1:781866/140‑1 (MQ=255)

           cGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATc                                                                                                                       <  1:297442/140‑1 (MQ=255)

            gACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATcc                                                                                                                      >  2:378573/1‑140 (MQ=255)

            gACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATcc                                                                                                                      <  1:814056/140‑1 (MQ=255)

              cAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATcccc                                                                                                                    <  1:75464/140‑1 (MQ=255)

               aaTACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATccccc                                                                                                                   <  2:112222/140‑1 (MQ=255)

                 tacgtacgCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATc                                                                                                                       <  2:107503/134‑1 (MQ=255)

                 tacgtacgCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATc                                                                                                                       >  1:107503/1‑134 (MQ=255)

                  acgtacgCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCctct                                                                                                                <  1:413365/140‑1 (MQ=255)

                  acgtacgCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCctct                                                                                                                <  1:229632/140‑1 (MQ=255)

                  acgtacgCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCctct                                                                                                                >  2:422621/1‑140 (MQ=255)

                          ttGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATAc                                                                                                        <  1:92132/140‑1 (MQ=255)

                          ttGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATAc                                                                                                        <  2:551059/140‑1 (MQ=255)

                            gagaTCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATcccc                                                                                                                    <  2:274230/126‑1 (MQ=255)

                            gagaTCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATcccc                                                                                                                    >  1:274230/1‑126 (MQ=255)

                            gagaTCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATAc                                                                                                        >  1:33767/1‑138 (MQ=255)

                            gagaTCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATAc                                                                                                        <  2:33767/138‑1 (MQ=255)

                                              tttGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATaa                                                                                    >  2:601553/1‑140 (MQ=255)

                                               ttGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATaaa                                                                                   >  2:41998/1‑140 (MQ=255)

                                                  aGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCt                                                                                >  2:479547/1‑140 (MQ=255)

                                                   gTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCtt                                                                               >  1:276021/1‑140 (MQ=255)

                                                       aaCATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTAAGCa                                                                           >  2:548860/1‑140 (MQ=255)

                                                         cATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCaaa                                                                         >  2:331039/1‑140 (MQ=255)

                                                            ccTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATa                                                                      <  1:283701/140‑1 (MQ=255)

                                                            ccTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATa                                                                      >  2:656290/1‑140 (MQ=255)

                                                              ttGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACa                                                                    >  1:621558/1‑140 (MQ=255)

                                                              ttGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACa                                                                    >  2:639167/1‑140 (MQ=255)

                                                                gtgAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGC‑GGGGAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACaaa                                                                  >  2:301084/1‑140 (MQ=255)

                                                                 tgAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACaaa                                                                  >  2:913403/1‑140 (MQ=255)

                                                                 tgAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAAt                                                                 >  1:231666/1‑140 (MQ=255)

                                                                  gAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAAtt                                                                <  2:231666/140‑1 (MQ=255)

                                                                        tcCCTTTCCTCATACCGCTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGAt                                                          >  2:60196/1‑140 (MQ=255)

                                                                        tcCCTTTCCTCATACCGCTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGAt                                                          >  2:67216/1‑140 (MQ=255)

                                                                        tcCCTTTCCTCATACCGCTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGAt                                                          <  1:422621/140‑1 (MQ=255)

                                                                                cTCATACCGCTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAAt                                                  >  2:716631/1‑140 (MQ=255)

                                                                                    tACCGCTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGtt                                              >  2:833705/1‑140 (MQ=255)

                                                                                       cGCTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACg                                           <  1:67216/140‑1 (MQ=255)

                                                                                        gCTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGa                                          >  1:221421/1‑140 (MQ=255)

                                                                                         cTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGaa                                         <  2:285108/140‑1 (MQ=255)

                                                                                         cTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGaa                                         >  1:217743/1‑140 (MQ=255)

                                                                                         cTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGaa                                         >  1:238348/1‑140 (MQ=255)

                                                                                         cTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGaa                                         >  1:921576/1‑140 (MQ=255)

                                                                                         cTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGaa                                         >  2:738000/1‑140 (MQ=255)

                                                                                         cTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGaa                                         >  1:228477/1‑140 (MQ=255)

                                                                                         cTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGaa                                         <  1:639167/140‑1 (MQ=255)

                                                                                           tGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAg                                       <  2:921576/140‑1 (MQ=255)

                                                                                           tGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAg                                       >  1:42847/1‑140 (MQ=255)

                                                                                             cACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCt                                     <  1:924102/140‑1 (MQ=255)

                                                                                                    taCTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCTattaatt                              <  2:585619/140‑1 (MQ=255)

                                                                                                     aCTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCTattaatta                             <  2:228477/140‑1 (MQ=255)

                                                                                                       tGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGaa                                         <  2:539010/126‑1 (MQ=255)

                                                                                                       tGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGaa                                         >  1:539010/1‑126 (MQ=255)

                                                                                                       tGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCt                                     <  1:646155/130‑1 (MQ=255)

                                                                                                       tGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCt                                     >  2:646155/1‑130 (MQ=255)

                                                                                                       tGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCTATTAattatt                           <  1:331039/140‑1 (MQ=255)

                                                                                                       tGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCTATTAattatt                           >  2:598783/1‑140 (MQ=255)

                                                                                                       tGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCTATTAattatt                           >  1:597702/1‑140 (MQ=255)

                                                                                                       tGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCTATTAattatt                           >  2:679535/1‑140 (MQ=255)

                                                                                                       tGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCTATTAattatt                           >  2:740373/1‑140 (MQ=255)

                                                                                                       tGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCTATTAattatt                           >  2:279776/1‑140 (MQ=255)

                                                                                                        gC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCTATTAATTAttg                          >  1:767755/1‑140 (MQ=255)

                                                                                                         c‑GGGTAGGNAAGGCGNNCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCTATTAATTAttgt                         >  1:565066/1‑140 (MQ=255)

                                                                                                         c‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCTATTAATTAttgt                         <  1:601553/140‑1 (MQ=255)

                                                                                                         c‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCTATTAATTAttgt                         >  2:186248/1‑140 (MQ=255)

                                                                                                           gggTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCTATTAATTAttgtt                        >  2:779457/1‑140 (MQ=255)

                                                                                                           gggTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCTATTAATTAttgtt                        >  2:498045/1‑140 (MQ=255)

                                                                                                            ggTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCTATTAATTAttgttg                       >  2:469823/1‑140 (MQ=255)

                                                                                                             gTAGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCTATTAATTATTGTTgg                      >  1:451856/1‑140 (MQ=255)

                                                                                                               aGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCTATTAATTATTGTTGGTa                    >  1:171491/1‑140 (MQ=255)

                                                                                                               aGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCTATTAATTATTGTTGGTa                    >  1:875980/1‑140 (MQ=255)

                                                                                                               aGGAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCTATTAATTATTGTTGGTa                    >  2:431391/1‑140 (MQ=255)

                                                                                                                 gAAAGGCGCGCAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCTATTAATTATTGTTGGTAat                  <  2:875980/140‑1 (MQ=255)

                                                                                                                         cgcAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCTATTAATTAttgt                         <  2:177120/125‑1 (MQ=255)

                                                                                                                         cgcAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCTATTAATTAttgt                         >  1:177120/1‑125 (MQ=255)

                                                                                                                         cgcAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCTATTAATTATTGTTGGTAATATAGTTTc          >  2:553959/1‑140 (MQ=255)

                                                                                                                         cgcAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCTATTAATTATTGTTGGTAATATAGTTTc          <  2:171491/140‑1 (MQ=255)

                                                                                                                         cgcAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCTATTAATTATTGTTGGTAATATAGTTTc          >  1:65574/1‑140 (MQ=255)

                                                                                                                           cAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCTATTAATTATTGTTGGTAATATAGTTTCaa        <  2:42847/140‑1 (MQ=255)

                                                                                                                           cAGAGGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCTATTAATTATTGTTGGTAATATAGTTTCaa        >  1:446268/1‑140 (MQ=255)

                                                                                                                            agagGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCTATTAATTATTGTTGGTAATATAGTTTCAAg       <  2:565066/140‑1 (MQ=255)

                                                                                                                            agagGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCTATTAATTATTGTTGGTAATATAGTTTCAAg       >  1:616129/1‑140 (MQ=255)

                                                                                                                            agagGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCTATTAATTATTGTTGGTAATATAGTTTCAAg       <  1:378573/140‑1 (MQ=255)

                                                                                                                            agagGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCTATTAATTATTGTTGGTAATATAGTTTCAAg       <  1:913403/140‑1 (MQ=255)

                                                                                                                            agagGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCTATTAATTATTGTTGGTAATATAGTTTCAAg       <  1:186248/140‑1 (MQ=255)

                                                                                                                            agagGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCTATTAATTATTGTTGGTAATATAGTTTCAAg       <  1:738000/140‑1 (MQ=255)

                                                                                                                            agagGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCTATTAATTATTGTTGGTAATATAGTTTCAAg       <  2:364132/140‑1 (MQ=255)

                                                                                                                            agagGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCTATTAATTATTGTTGGTAATATAGTTTCAAg       <  1:60825/140‑1 (MQ=255)

                                                                                                                             gagGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCTATTAATTATTGTTGGTAATATAGTTTCAAGt      <  2:291783/140‑1 (MQ=255)

                                                                                                                             gagGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCTATTAATTATTGTTGGTAATATAGTTTCAAGt      <  1:920241/140‑1 (MQ=255)

                                                                                                                             gagGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCTATTAATTATTGTTGGTAATATAGTTTCAAGt      <  1:679535/140‑1 (MQ=255)

                                                                                                                             gagGGAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCTATTAATTATTGTTGGTAATATAGTTTCAAGt      <  1:60196/140‑1 (MQ=255)

                                                                                                                               gggAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCTATTAATTATTGTTGGTAATATAGTTTCAAGTgg    <  1:716631/140‑1 (MQ=255)

                                                                                                                                ggAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGAT‑AATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCTATTAATTATTGTTGGTAATATAGTTTCAAGTGGTa  >  2:74682/1‑140 (MQ=255)

                                                                                                                                 gAAATATAATATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCTATTAATTATTGTTGGTAATATAGTTTCAAGTGGTa  <  2:779160/140‑1 (MQ=255)

GGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGC‑GGGTAGGAAAGGCGCGCAGAGGGAAATATAAGATTGTTAACTATCCCCCTCTGGAAATACGACTTGTGAGCATAAGATAAATCTTAGCAAAATACAAATTAAAGATAAGGAAATTGTTACGAAAGCTATTAATTATTGTTGGTAATATAGTTTCAAGTGGTA  >  NC_000913/1050534‑1050801

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`