Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,458,851 G→T Q196H (CAG→CAT paaG → putative ring 1,2‑epoxyphenylacetyl‑CoA isomerase (oxepin‑CoA forming)

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,458,8510GT99.4% 585.7 / ‑3.4 165Q196H (CAG→CATpaaGputative ring 1,2‑epoxyphenylacetyl‑CoA isomerase (oxepin‑CoA forming)
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base T (98/66);  total (98/67)
Fisher's exact test for biased strand distribution p-value = 4.06e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.35e-01

Only 100 of 170 total aligned reads displayed.

CTGCCACGCGTTGCCGGACGAGCGCGCGCCATGGGGCTGGCACTGCTGGGGAATCAACTGAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACAGCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACGCTCGATACGCAACTGGATCTGGAACGTGACTATCAGCGACTTGCCGGACGGAGCG  >  NC_000913/1458714‑1458987
                                                                                                                                         |                                                                                                                                        
cTGCCACGCGTTGCCGGACGAGCGCGCGCCATGGGGCTGGCACTGCTGGGGAATCAACTGAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCt                                                                                                                                        >  1:1940063/1‑140 (MQ=255)
cTGCCACGCGTTGCCGGACGAGCGCGCGCCATGGGGCTGGCACTGCTGGGGAATCAACTGAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCt                                                                                                                                        >  2:2845878/1‑140 (MQ=255)
     aCGCGTTGCCGGACGAGCGCGCGCCATGGGGCTGGCACTGCTGGGGAATCAACTGAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCAc                                                                                                                                   >  2:1187512/1‑140 (MQ=255)
      cgcgTTGCCGGACGAGCGCGCGCCATGGGGCTGGCACTGCTGGGGAATCAACTGAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACg                                                                                                                                  >  2:828261/1‑140 (MQ=255)
      cgcgTTGCCGGACGAGCGCGCGCCATGGGGCTGGCACTGCTGGGGAATCAACTGAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACg                                                                                                                                  >  1:1580473/1‑140 (MQ=255)
      cgcgTTGCCGGACGAGCGCGCGCCATGGGGCTGGCACTGCTGGGGAATCAACTGAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACg                                                                                                                                  >  1:320354/1‑140 (MQ=255)
       gcgTTGCCGGACGAGCGCGCGCCATGGGGCTGGCACTGCTGGGGAATCAACTGAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACgg                                                                                                                                 <  2:1188048/140‑1 (MQ=255)
          ttGCCGGACGAGCGCGCGCCATGGGGCTGGCACTGCTGGGGAATCAACTGAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCAt                                                                                                                              <  1:2749169/140‑1 (MQ=255)
            gCCGGACGAGCGCGCGCCATGGGGCTGGCACTGCTGGGGAATCAACTGAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCt                                                                                                                            <  2:1576532/140‑1 (MQ=255)
                     gcgcgcgcCATGGGGCTGGCACTGCTGGGGAATCAACTGAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGAcaca                                                                                                                   >  2:2284858/1‑140 (MQ=255)
                      cgcgcgcCATGGGGCTGGCACTGCTGGGGAATCAACTGAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACaa                                                                                                                  <  2:1940063/140‑1 (MQ=255)
                        cgcgcCATGGGGCTGGCACTGCTGGGGAATCAACTGAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAGCGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAAcc                                                                                                                <  1:434701/140‑1 (MQ=255)
                         gcgcCATGGGGCTGGCACTGCTGGGGAATCAACTGAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCg                                                                                                               <  1:2284858/140‑1 (MQ=255)
                              aTGGGGCTGGCACTGCTGGGGAATCAACTGAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACAtt                                                                                                          <  1:1738428/140‑1 (MQ=255)
                              aTGGGGCTGGCACTGCTGGGGAATCAACTGAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACAtt                                                                                                          <  1:2849348/140‑1 (MQ=255)
                              aTGGGGCTGGCACTGCTGGGGAATCAACTGAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACAtt                                                                                                          <  1:2907253/140‑1 (MQ=255)
                              aTGGGGCTGGCACTGCTGGGGAATCAACTGAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACAtt                                                                                                          <  1:429017/140‑1 (MQ=255)
                              aTGGGGCTGGCACTGCTGGGGAATCAACTGAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACAtt                                                                                                          <  1:885135/140‑1 (MQ=255)
                              aTGGGGCTGGCACTGCTGGGGAATCAACTGAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACAGCTGGCACGGCATCTGGCGACACAACCGACAtt                                                                                                          <  2:1633982/140‑1 (MQ=255)
                               tGGGGCTGGCACTGCTGGGGAATCAACTGAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGAGCAACATCTGGCACGGCATCTGGCGACACAACCGACAttt                                                                                                         >  2:2899752/1‑140 (MQ=255)
                                    cTGGCACTGCTGGGGAATCAACTGAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCt                                                                                                    <  2:2662953/140‑1 (MQ=255)
                                     tGGCACTGCTGGGGAATCAACTGAGTGCTGAACAGGCGCACGGATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCtt                                                                                                   >  2:147814/1‑140 (MQ=255)
                                       gCACTGCTGGGGAATCAACTGAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAAcc                                                                                                                >  1:2013576/1‑125 (MQ=255)
                                       gCACTGCTGGGGAATCAACTGAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAAcc                                                                                                                <  2:2013576/125‑1 (MQ=255)
                                       gCACTGCTGGGGAATCAACTGAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTgg                                                                                                 >  2:914824/1‑140 (MQ=255)
                                       gCACTGCTGGGGAATCAACTGAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTgg                                                                                                 >  1:772808/1‑140 (MQ=255)
                                       gCACTGCTGGGGAATCAACTGAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTgg                                                                                                 >  2:152643/1‑140 (MQ=255)
                                       gCACTGCTGGGGAATCAACTGAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTgg                                                                                                 >  2:1073231/1‑140 (MQ=255)
                                       gCACTGCTGGGGAATCAACTGAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTgg                                                                                                 >  1:18161/1‑140 (MQ=255)
                                        cACTGCTGGGGAATCAACTGAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGa                                                                                                <  1:1537828/140‑1 (MQ=255)
                                        cACTGCTGGGGAATCAACTGAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGa                                                                                                <  2:2693570/140‑1 (MQ=255)
                                             ctgGGGAATCAACTGAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTAt                                                                                           >  1:2450918/1‑140 (MQ=255)
                                             ctgGGGAATCAACTGAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTAt                                                                                           >  1:2143569/1‑140 (MQ=255)
                                                 ggAATCAACTGAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATcaag                                                                                       >  1:369381/1‑140 (MQ=255)
                                                  gAATCAACTGAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGTGACACAACCGACATTTGGTCTTGGACTTATcaagc                                                                                      <  1:922612/140‑1 (MQ=255)
                                                  gAATCAACTGAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATcaagc                                                                                      <  2:1259191/140‑1 (MQ=255)
                                                  gAATCAACTGAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATcaagc                                                                                      <  1:1149444/140‑1 (MQ=255)
                                                  gAATCAACTGAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATcaagc                                                                                      <  1:1574823/140‑1 (MQ=255)
                                                  gAATCAACTGAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATcaagc                                                                                      <  1:1746469/140‑1 (MQ=255)
                                                    aTCAACTGAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATcaagcaa                                                                                    <  2:2975205/140‑1 (MQ=255)
                                                       aaCTGAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCg                                                                                 <  1:1879518/140‑1 (MQ=255)
                                                       aaCTGAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCg                                                                                 <  2:2693855/140‑1 (MQ=255)
                                                           gAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATaa                                                                             >  2:490994/1‑140 (MQ=255)
                                                            aGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATaaa                                                                            >  1:1272603/1‑140 (MQ=255)
                                                             gTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAAt                                                                           >  2:1140893/1‑140 (MQ=255)
                                                                 tGAACAGGCGCACGAATGGGGGATGATCTGGCGGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAgcg                                                                       >  2:149408/1‑140 (MQ=255)
                                                                   aaCAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGTACTTATCAAGCAAGCGATAAATAGCGCt                                                                     <  2:2628108/140‑1 (MQ=255)
                                                                   aaCAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCt                                                                     >  2:2388396/1‑140 (MQ=255)
                                                                   aaCAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCt                                                                     >  1:1365046/1‑140 (MQ=255)
                                                                   aaCAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCt                                                                     <  2:783135/140‑1 (MQ=255)
                                                                   aaCAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCt                                                                     >  1:96147/1‑140 (MQ=255)
                                                                    aCAGGCGCACGAATGGGGGATGATCTGGCAGGTTGCTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTg                                                                    >  2:2069267/1‑140 (MQ=255)
                                                                     cAGGCGCACGAATGGGGGATGATCTGACAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa                                                                   <  2:1853069/140‑1 (MQ=255)
                                                                        gcgcACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAAc                                                                >  2:1581776/1‑140 (MQ=255)
                                                                             cGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATa                                                           >  2:2467159/1‑140 (MQ=255)
                                                                              gAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATAc                                                          <  2:1272603/140‑1 (MQ=255)
                                                                                  gggggATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACGCTc                                                      >  1:2164764/1‑140 (MQ=255)
                                                                                  gggggATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACGCTc                                                      >  1:267636/1‑140 (MQ=255)
                                                                                  gggggATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACGCTc                                                      >  1:2480713/1‑140 (MQ=255)
                                                                                  gggggATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATCTGGTCTTGGACTTATCAAGCAAGCAATAAATAGCGCTGa                                                                   >  1:2621213/1‑127 (MQ=255)
                                                                                      gatgatCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACGCTCGATa                                                  <  2:1368054/140‑1 (MQ=255)
                                                                                       atgatCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACGCTCGATAc                                                 <  1:2467159/140‑1 (MQ=255)
                                                                                        tgatCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACg                                                         <  1:880319/131‑1 (MQ=255)
                                                                                          atCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACGCTCGATACGCa                                              >  1:204289/1‑140 (MQ=255)
                                                                                          atCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACGCTCGATACGCa                                              <  2:2591068/140‑1 (MQ=255)
                                                                                          atCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACGCTCGATACGCa                                              >  2:2096832/1‑140 (MQ=255)
                                                                                            cTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACGCTCGATACGCAAc                                            <  1:2693722/140‑1 (MQ=255)
                                                                                              ggCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACGCTCGATACGCAACTg                                          >  1:2731563/1‑140 (MQ=255)
                                                                                              ggCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACGCTCGATACGCAACTg                                          >  1:2698539/1‑140 (MQ=255)
                                                                                                     tgttgATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACGCTCGATACGCAACTGGATCTgg                                   >  1:2115163/1‑140 (MQ=255)
                                                                                                      gttgATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACGCTCGATACGCAACTGGATCTGGa                                  >  2:1510517/1‑140 (MQ=255)
                                                                                                      gttgATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACGCTCGATACGCAACTGGATCTGGa                                  >  1:1655264/1‑140 (MQ=255)
                                                                                                      gttgATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACGCTCGATACGCAACTGGATCTGGa                                  >  2:1751263/1‑140 (MQ=255)
                                                                                                      gttgATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACGCTCGATACGCAACTGGATCTGGa                                  >  2:1919811/1‑140 (MQ=255)
                                                                                                      gttgATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACGCTCGATACGCAACTGGATCTGGa                                  >  1:2722362/1‑140 (MQ=255)
                                                                                                       ttgATGATGAAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACGCTCGAt                                                   <  2:1410684/122‑1 (MQ=255)
                                                                                                        tgatgatgaAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACGCTCGATACGCAACTGGATCTGGAAc                                <  1:1726856/140‑1 (MQ=255)
                                                                                                          atgatgaAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACGCTCGATACGCAACTGGATCTGGAACGt                              <  1:1090123/140‑1 (MQ=255)
                                                                                                          atgatgaAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACGCTCGATACGCAACTGGATCTGGAACGt                              <  1:1777192/140‑1 (MQ=255)
                                                                                                            gatgaAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACGCTCGATACGCAACTGGATCTGGAACGTGa                            <  1:378112/140‑1 (MQ=255)
                                                                                                             atgaAACGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACGCTCGATACGCAACTGGATCTGGAACGTGAc                           >  2:2608745/1‑140 (MQ=255)
                                                                                                                 aaCGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACGCTCGATACGCAACTGGATCTGGAACGTGACTATc                       >  2:2202671/1‑140 (MQ=255)
                                                                                                                   cGCTGGCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACGCTCGATACGCAACTGGATCTGGAACGTGACTATCAg                     <  2:18161/140‑1 (MQ=255)
                                                                                                                        gCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACGCTCGATACGCAACTGGATCTGGAACGTGACTATCAGCGACt                >  2:444696/1‑140 (MQ=255)
                                                                                                                        gCAGATACCGCGCAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACGCTCGATACGCAACTGGATCTGGAACGTGACTATCAGCGACt                >  1:1561343/1‑140 (MQ=255)
                                                                                                                                  cgcAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACGCTCGATACGCAACTGGATCTGGAACGTGACTATCa                      <  1:2278803/124‑1 (MQ=255)
                                                                                                                                  cgcAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACGCTCGATACGCAACTGGATCTGGAACGTGACTATCAGCGACTTGCcggacgg      >  2:662822/1‑140 (MQ=255)
                                                                                                                                  cgcAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACGCTCGATACGCAACTGGATCTGGAACGTGACTATCAGCGACTTGCcggacgg      >  1:1466546/1‑140 (MQ=255)
                                                                                                                                  cgcAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACGCTCGATACGCAACTGGATCTGGAACGTGACTATCAGCGACTTGCcggacgg      >  2:333183/1‑140 (MQ=255)
                                                                                                                                  cgcAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACGCTCGATACGCAACTGGATCTGGAACGTGACTATCAGCGACTTGCcggacgg      >  1:489480/1‑140 (MQ=255)
                                                                                                                                  cgcAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACGCTCGATACGCAACTGGATCTGGAACGTGACTATCAGCGACTTGCcggacgg      >  1:357738/1‑140 (MQ=255)
                                                                                                                                  cgcAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACGCTCGATACGCAACTGGATCTGGAACGTGACTATCAGCGACTTGCcggacgg      >  1:2006127/1‑140 (MQ=255)
                                                                                                                                  cgcAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACGCTCGATACGCAACTGGATCTGGAACGTGACTATCAGCGACTTGCcggacgg      >  1:1420263/1‑140 (MQ=255)
                                                                                                                                  cgcAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACGCTCGATACGCAACTGGATCTGGAACGTGACTATCAGCGACTTGCcggacgg      >  2:783962/1‑140 (MQ=255)
                                                                                                                                  cgcAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACGCTCGATACGCAACTGGATCTGGAACGTGACTATCAGCGACTTGCcggacgg      >  1:1231878/1‑140 (MQ=255)
                                                                                                                                  cgcAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACGCTCGATACGCAACTGGATCTGGAACGTGACTATCAGCGACTTGCcggacg       <  2:2382779/139‑1 (MQ=255)
                                                                                                                                  cgcAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACGCTCGATACGCAACTGGATCTGGAACGTGACTATCAGCGACTTGCcggacg       >  1:2382779/1‑139 (MQ=255)
                                                                                                                                   gcAACATCTGGCACGGCATCTGGCGACACAACCGTCATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACGCTCTATACGCAACTGGATCTGGAACGTGACTATCAGCGACTTGCcggacgga     <  1:1073231/140‑1 (MQ=255)
                                                                                                                                   gcAACATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACGCTCGATACGCAACTGGATCTGGAACGTGACTATCAGCGACTTGCcggacgga     <  2:1742535/140‑1 (MQ=255)
                                                                                                                                      aCATCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATACCGCTGAAACCAATACGCTCGATACGCAACTGGATCTGGAACGTGACTATCAGCGACTTGCCGGACGGAgcg  <  1:2899752/140‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                        
CTGCCACGCGTTGCCGGACGAGCGCGCGCCATGGGGCTGGCACTGCTGGGGAATCAACTGAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACAGCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACGCTCGATACGCAACTGGATCTGGAACGTGACTATCAGCGACTTGCCGGACGGAGCG  >  NC_000913/1458714‑1458987

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: