BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 375201	NA (NA)	26 (0.370)	16/238	2.8	NA	noncoding (19/36 nt)	other	REP31f
*	?	NC_000913	= 377352	NA (NA)	26 (0.370)	16/238	2.8	NA	noncoding (17/37 nt)	other	REP32a

Only 100 of 187 total aligned reads displayed.

ACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCACACGACTGCCGGAT  >  NC_000913/375063‑375340

 cGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑tt                                                                                                                                           >  1:397688/1‑140 (MQ=255)

            gtaagccgtaggcctgataagacgcgcaA‑A‑‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCAt                                                                                                                                 <  1:279699‑M1/112‑1 (MQ=255)

            gtaagccgtaggcctgataagacgcgcaA‑A‑‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCAt                                                                                                                                 <  2:295542‑M1/112‑1 (MQ=255)

            gtaagccgtaggcctgataagacgcgcaA‑A‑‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCAt                                                                                                                                 <  1:655524‑M1/112‑1 (MQ=255)

            gtaagccgtaggcctgataagacgcgcaA‑A‑‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCAt                                                                                                                                 <  1:1269754‑M1/112‑1 (MQ=255)

            gtaagccgtaggcctgataagacgcgcaA‑A‑‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCAt                                                                                                                                 <  2:1004453‑M1/112‑1 (MQ=255)

            gtaagccgTAGGCCTGATAAGACGCGCAA‑A‑‑GCGTCGCATCAGGCAT‑GGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATc                                                                                                                                >  2:676405/8‑140 (MQ=11)

            gtaagccgTAGGCCTGATAAGACGCGCAA‑A‑‑GCGTCGCATCAGGCAT‑GGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATc                                                                                                                                >  2:553776/8‑140 (MQ=11)

            gtaagccgTAGGCCTGATAAGACGCGCAA‑A‑‑GCGTCGCATCAGGCAT‑GGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATc                                                                                                                                >  1:1149365/8‑140 (MQ=11)

            gtaagccgTAGGCCTGATAAGACGCG‑TT‑AGCGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCa                                                                                                                                  >  2:276768/8‑140 (MQ=11)

            gtaagccgTAGGCCTGATAAGACGCG‑TT‑A‑‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATc                                                                                                                                >  1:358253/8‑140 (MQ=255)

            gtaagccgTAGGCCTGATAAGACGCG‑TT‑A‑‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATc                                                                                                                                >  1:213588/8‑140 (MQ=255)

            gtaagccgTAGGCCTGATAAGACGCG‑TT‑A‑‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATc                                                                                                                                >  1:773801/8‑140 (MQ=255)

            gtaagccgTAGGCCTGATAAGACGCG‑TT‑A‑‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATc                                                                                                                                >  1:1244106/8‑140 (MQ=255)

            gtaagccgTAGGCCTGATAAGACGCG‑TT‑A‑‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATc                                                                                                                                >  2:424002/8‑140 (MQ=255)

            gtaagccgTAGGCCTGATAAGACGCG‑CAAA‑‑GCGTCGCATCAGGCAT‑GGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATc                                                                                                                                >  1:1215396/8‑140 (MQ=11)

             taagccgTAGGCCTGATAAGACGCGCAA‑A‑‑GCGTCGCATCAGGCAT‑GGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCa                                                                                                                               >  2:457893/7‑140 (MQ=11)

             taagccgTAGGCCTGATAAGACGCG‑TT‑A‑‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCa                                                                                                                               >  1:18926/7‑140 (MQ=255)

             taaaccgtaggcctgataagacgcgcaT‑A‑‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATc                                                                                                                                <  2:1160395‑M1/113‑1 (MQ=255)

                      ggcctgataagacgcgcaA‑A‑‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTg                                                                                                                       >  1:295542‑M1/19‑140 (MQ=255)

                      ggCCTGATAAGACGCGCAA‑A‑‑GCGTCGCATCAGGCAT‑GGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTgc                                                                                                                      <  1:553776/140‑1 (MQ=11)

                      ggCCTGATAAGACGCG‑TT‑A‑‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTgc                                                                                                                      <  1:669022/140‑1 (MQ=37)

                      ggCCTGATAAGACGCG‑TT‑A‑‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTgc                                                                                                                      >  1:1021677/1‑140 (MQ=37)

                      ggCCTGATAAGACGCG‑TT‑A‑‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTgc                                                                                                                      <  1:1373012/140‑1 (MQ=37)

                       gcctgataagacgcgcaA‑A‑‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTgc                                                                                                                      >  2:36119‑M1/18‑140 (MQ=255)

                       gCCTGATAAGACGCG‑TT‑A‑‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATCTGTAGGCCTGATAAGACGCGcatagcgtcgcatcaggcat                                                                                                                          >  1:787619‑M1/1‑116 (MQ=255)

                       gCCTGATAAGACGCG‑TT‑A‑‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATCTGTAGGCCTGATAAGACGCGcatagcgtcgcatcaggcat                                                                                                                          <  2:787619‑M1/136‑21 (MQ=255)

                         cTGATAAGACGCG‑TT‑A‑‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCa                                                                                                                   <  1:1273204/140‑1 (MQ=34)

                                   gcg‑TT‑A‑‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCgg                                                                                                         >  2:1273204/1‑140 (MQ=34)

                                    gcgcaaa‑‑GCGTCGCATCAGGCAT‑GGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTgc                                                                                                                      <  1:836619/121‑1 (MQ=11)

                                    gcgcaaa‑‑GCGTCGCATCAGGCAT‑GGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTgc                                                                                                                      >  2:836619/7‑127 (MQ=11)

                                        T‑A‑‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATgc                                                                                                     >  2:1326830‑M1/1‑140 (MQ=255)

                                               GTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATgcggcg                                                                                                 <  1:512710‑M1/140‑1 (MQ=255)

                                               GTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATgcggcg                                                                                                 <  2:1106706‑M1/140‑1 (MQ=255)

                                               GTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATgcggcg                                                                                                 <  2:376489‑M1/140‑1 (MQ=255)

                                                 cGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGcatagcgtcgcatcaggcatctgcgcacgacttatctatgtttacc                                                                                                >  1:251097‑M1/1‑94 (MQ=255)

                                                 CGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCACACGACTGCcggatgcgataaa                                                                                               <  2:1141457‑M1/140‑6 (MQ=255)

                                                 CGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGACTGATAAGACGCG‑TTAGCGTCGCATCAGGCAACTGCGCACGACTGCCGGATGCGGCGTa                                                                                               <  2:161849‑M1/140‑1 (MQ=255)

                                                  gCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGttagcgtcgcatcaggcatctgcgcacgacttatctatgtttaccac                                                                                               >  1:64267‑M1/1‑93 (MQ=255)

                                                  gCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGttagcgtcgcatcaggcatctgcgcacgacttatctatgtttaccac                                                                                               >  2:922616‑M1/1‑93 (MQ=255)

                                                  gCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGcatagcgtcgcatcaggcatctgcgcacgacttatctatgtttacca                                                                                               >  2:44785‑M1/1‑93 (MQ=255)

                                                           ATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTAt                                                                                     >  2:607913‑M1/1‑140 (MQ=255)

                                                             CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATcc                                                                                   <  1:607913‑M1/140‑1 (MQ=255)

                                                                   aCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGcatagcgtcgcatcaggcatctgcgcacgacttatctatgtttaccacatcaaatcatcaggca                                                                              >  1:677093‑M1/1‑76 (MQ=255)

                                                                   aCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGTCTa                                                                             >  1:488471/1‑140 (MQ=17)

                                                                   aCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGTCTa                                                                             >  1:1181879/1‑140 (MQ=37)

                                                                    cGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGTCTAc                                                                            >  1:637972/1‑140 (MQ=37)

                                                                    cGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGTCTAc                                                                            >  2:640802/1‑140 (MQ=37)

                                                                     GACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACg                                                                           <  1:866042‑M1/140‑1 (MQ=255)

                                                                       CTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGa                                                                         >  2:866042‑M1/1‑140 (MQ=255)

                                                                           cGGATGCGGCGTGAGCGCCTTAGCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGgc                                                                     <  2:1269754/140‑1 (MQ=255)

                                                                            ggATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGgcg                                                                    <  1:1033226/140‑1 (MQ=40)

                                                                            ggATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGgcg                                                                    <  2:1149365/140‑1 (MQ=40)

                                                                            ggATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGgcg                                                                    <  2:1244106/140‑1 (MQ=40)

                                                                            ggATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGgcg                                                                    <  1:1333060/140‑1 (MQ=40)

                                                                            ggATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGgcg                                                                    <  1:424002/140‑1 (MQ=40)

                                                                            ggATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGgcg                                                                    <  1:1134224/140‑1 (MQ=40)

                                                                            ggATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGgcg                                                                    <  2:483108/140‑1 (MQ=40)

                                                                               tGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCgg                                                                 >  2:638391/1‑140 (MQ=40)

                                                                                 cggcgTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGa                                                               <  2:513580/140‑1 (MQ=40)

                                                                                 cggcgTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGa                                                               <  1:376489/140‑1 (MQ=40)

                                                                                 cggcgTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGa                                                               <  1:1315865/140‑1 (MQ=40)

                                                                                 cggcgTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGa                                                               <  2:948257/140‑1 (MQ=40)

                                                                                 cggcgTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGa                                                               <  2:889911/140‑1 (MQ=40)

                                                                                 cggcgTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGa                                                               >  1:889911/1‑140 (MQ=40)

                                                                                      tGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTg                                                          <  1:1004453/140‑1 (MQ=40)

                                                                                      tGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTg                                                          <  1:443934/140‑1 (MQ=40)

                                                                                      tGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTg                                                          <  2:498813/140‑1 (MQ=40)

                                                                                      tGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTg                                                          <  2:1312395/140‑1 (MQ=40)

                                                                                                  ccGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATaa                                              <  2:436397/140‑1 (MQ=40)

                                                                                                    ggCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGttagcgtcgcatcaggcatctgcgcacgacttatctatgtttaccacatcaaatcatcaggcactttgaagtcggcatacgggtcgtcttcatcctg                                             <  1:922616‑M1/140‑98 (MQ=255)

                                                                                                    ggCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGa                                            <  2:769643/140‑1 (MQ=40)

                                                                                                     gCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGAc                                           <  2:657543/140‑1 (MQ=40)

                                                                                                      ccTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGAcg                                          >  2:220962/1‑140 (MQ=255)

                                                                                                          cGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGtt                                      >  1:881452/1‑140 (MQ=255)

                                                                                                          cGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGtt                                      >  1:521652/1‑140 (MQ=255)

                                                                                                          cGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGtt                                      >  1:996910/1‑140 (MQ=40)

                                                                                                               ggCGCGAGAATTTGTAGGCCTGATAAGACGCGcatagcgtcgcatcaggcatctgcgcacgacttatctatgtttaccacatcaaatcatcaggcactttgaagtcggcatacgggtcgtcttcatcctgctcttcggcg                                  >  2:30710‑M1/1‑32 (MQ=255)

                                                                                                                gcgcGAGAATTTGTAGGCCTGATAAGACGCGcatagcgtcgcatcaggcatctgcgcacgacttatctatgtttaccacatcaaatcatcaggcactttgaagtcggcatacgggtcgtcttcatcctgctcttcggcgc                                 >  2:1396581‑M1/1‑31 (MQ=255)

                                                                                                                gcgcGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTc                                >  1:240933/1‑140 (MQ=38)

                                                                                                                    gagaATTTGTAGGCCTGATAAGACGCGttagcgtcgcatcaggcatctgcgcacgacttatctatgtttaccacatcaaatcatcaggcactttgaagtcggcatacgggtcgtcttcatcctgctcttcggcgctgagc                             >  1:460329‑M1/1‑27 (MQ=255)

                                                                                                                    gagaATTTGTAGGCCTGATAAGACGCGttagcgtcgcatcaggcatctgcgcacgacttatctatgtttaccacatcaaatcatcaggcactttgaagtcggcatacgggtcgtcttcatcctgctcttcggcgctgagc                             >  2:1085841‑M1/1‑27 (MQ=255)

                                                                                                                     gtaagccgTAGGCCTGATAAGACGCGCAAAGCGTCGCATCAGGCAT‑GGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATc                           >  2:822761/8‑140 (MQ=11)

                                                                                                                     gtaagccgTAGGCCTGATAAGACGCGCAAAGCGTCGCATCAGGCAT‑GGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATc                           >  1:521993/8‑140 (MQ=11)

                                                                                                                     gtaagccgTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTCGTAGGCCTGATAAGACGCGTTAGCGTCGCATc                           >  1:811223/8‑140 (MQ=255)

                                                                                                                     agaATTTGTAGGCCTGATAAGACGCGttagcgtcgcatcaggcatctgcgcacgacttatctatgtttaccacatcaaatcatcaggcactttgaagtcggcatacgggtcgtcttcatcctgctcttcggcgctgagcg                            >  2:33039‑M1/1‑26 (MQ=255)

                                                                                                                     agaATTTGTAGGCCTGATAAGACGCGcatagcgtcgcatcaggcatctgcgcacgacttatctatgtttaccacatcaaatcatcaggcactttgaagtcggcatacgggtcgtcttcatcctgctcttcggcgctgagc                            >  2:690569‑M1/1‑26 (MQ=255)

                                                                                                                      gaATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCa                          <  2:521652/140‑1 (MQ=34)

                                                                                                                        aTTTGTAGGCCTGATAAGACGCGcatagcgtcgcatcaggcatctgcgcacgacttatctatgtttaccacatcaaatcatcaggcactttgaagtcggcatacgggtcgtcttcatcctgctcttcggcgctgagcgcg                         <  1:30710‑M1/140‑118 (MQ=255)

                                                                                                                         tttGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGc                       <  2:1195471/140‑1 (MQ=34)

                                                                                                                            gTAGGCCTGATAAGACGCGttagcgtcgcatcaggcatctgcgcacgacttatctatgtttaccacatcaaatcatcaggcactttgaagtcggcatacgggtcgtcttcatcctgctcttcggcgctgagcgcgctgtg                     <  1:661322‑M1/140‑122 (MQ=255)

                                                                                                                             tAGGCCTGATAAGACGCGcatagcgtcgcatcaggcatctgcgcacgacttatctatgtttaccacatcaaatcatcaggcactttgaagtcggcatacgggtcgtcttcatcctgctcttcggcgctgagcgcgctgtg                    <  2:1030434‑M1/140‑123 (MQ=255)

                                                                                                                             tAGGCCTGATAAGACGCGcatagcgtcgcatcaggcatctgcgcacgacttatctatgtttaccacatcaaatcatcaggcactttgaagtcggcatacgggtcgtcttcatcctgctcttcggcgctgagcgcgctgtg                    <  1:1396581‑M1/140‑123 (MQ=255)

                                                                                                                             tAGGCCTGATAAGACGCGcatagcgtcgcatcaggcatctgcgcacgacttatccatgtttaccacatcaaatcatcaggcactttgaagtcggcatacgggtcgtcttcatcctgctcttcggcgctgagcgcgctgtg                    <  2:980411‑M1/140‑123 (MQ=255)

                                                                                                                                     aTAAGACGCGttagcgtcgcatcaggcatctgcgcacgacttatctatgtttaccacatcaaatcatcaggcactttgaagtcggcatacgggtcgtcttcatcctgctcttcggcgctgagcgcgctgtgcaacactat            <  2:460329‑M1/140‑131 (MQ=255)

                                                                                                                                     aTAAGACGCGcatagcgtcgcatcaggcatctgcgcacgacttatctatgtttaccacatcaaatcatcaggcactttgaagtcggcatacgggtcgtcttcatcctgctcttcggcgctgagcgcgctg                      >  2:724963‑M1/1‑10 (MQ=255)

                                                                                                                                     aTAAGACGCGcatagcgtcgcatcaggcatctgcgcacgacttatctatgtttaccacatcaaatcatcaggcactttgaagtcggcatacgggtcgtcttcatcctgctcttcggcgctgagcgcgctg                      <  1:724963‑M1/130‑121 (MQ=255)

                                                                                                                                     aTAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCACACGa           >  2:77598/1‑140 (MQ=34)

                                                                                                                                     aTAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCACACGa           >  1:1094548/1‑140 (MQ=34)

                                                                                                                                          aCGCGcatagcgtcgcatcaggcatctgcgcacgacttatctatgtttaccacatcaaatcatcaggcactttgaagtcggcatacgggtcgtcttcatcctgctcttcggcgctgagcgcgctgtgcaacactatactg       >  2:1378056‑M1/1‑5 (MQ=255)

ACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑‑GCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCACACGACTGCCGGAT  >  NC_000913/375063‑375340

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.