New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3363001 =123 (1.240)134 (1.360) 70/274 0.1 67.8% coding (195/2382 nt) yhcD putative fimbrial usher protein YhcD
?NC_000913 3766087 = 5 (0.050)coding (3905/4134 nt) rhsA rhs element protein RhsA

Only 100 of 146 total aligned reads displayed.

ACAATATATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3363140‑3363001
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAGGAACTAATTGA  >  NC_000913/3766087‑3766225
                                                                                                                                                                                                                                                                                         
ACAATATATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACT                                                                                                                                             <  1:1391197/140‑1
ACAATATATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACT                                                                                                                                             >  2:1044278/1‑140
 CAATATATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTT                                                                                                                                            <  2:459055/140‑1
   ATATATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACT                                                                                                                                             <  2:857886/137‑1
    TATATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGA                                                                                                                                         <  1:356707/140‑1
    TATATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑A‑TTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGAT                                                                                                                                        >  1:200236/1‑140
    TATATAGTCGTAACAGCCA‑TTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGAT                                                                                                                                        <  2:245647/140‑1
     ATATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGAT                                                                                                                                        <  1:561813/140‑1
       ATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAGATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATAT                                                                                                                                      <  1:239934/140‑1
       ATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑A‑TTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATA                                                                                                                                     <  1:436238/140‑1
        TAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATA                                                                                                                                     <  2:913475/140‑1
         AGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAA                                                                                                                                    >  2:949711/1‑140
         AGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAA                                                                                                                                    >  1:1445263/1‑140
          GTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACT                                                                                                                                             <  1:1522501/130‑1
          GTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACT                                                                                                                                             >  2:1522501/1‑130
           TCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTTCGCCATTTACTTAGATATAAC                                                                                                                                   >  2:1660101/1‑140
           TCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACA                                                                                                                                  <  2:526726/140‑1
           TCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCATTTTACTTAGATATAACA                                                                                                                                  >  1:1602226/1‑140
              TAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATG                                                                                                                               >  1:284227/1‑140
              TAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATG                                                                                                                               >  1:960905/1‑140
              TAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATG                                                                                                                               >  1:646114/1‑140
              TAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATG                                                                                                                               >  2:1645583/1‑140
              TAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATG                                                                                                                               >  1:1137097/1‑140
              TAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATG                                                                                                                               <  1:1645583/140‑1
              TAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATG                                                                                                                               >  1:1431661/1‑140
              TAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATG                                                                                                                               <  2:467584/140‑1
              TAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTT                                                                                                                                            <  1:632432/127‑1
              TAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACT                                                                                                                                             >  2:849691/1‑126
              TAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACT                                                                                                                                             <  1:849691/126‑1
               AACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGA                                                                                                                              >  1:286489/1‑140
                ACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCAATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTT                                                                                                                                            >  1:762272/1‑126
                ACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCAATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTT                                                                                                                                            <  2:762272/126‑1
                ACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGAT                                                                                                                             >  1:1685606/1‑140
                ACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGAT                                                                                                                             >  1:1543891/1‑140
                ACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGAT                                                                                                                             >  1:273896/1‑140
                  AGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAG                                                                                                                           <  2:1327178/140‑1
                   GCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGC                                                                                                                          <  2:150986/140‑1
                      ATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTC                                                                                                                       >  2:1461508/1‑140
                       TTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCT                                                                                                                      <  2:142250/140‑1
                              CTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAA                                                                                                               <  2:1137097/140‑1
                                  AGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGT                                                                                                           >  2:442665/1‑140
                                  AGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGT                                                                                                           >  1:993378/1‑140
                                  AGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGT                                                                                                           >  1:1099008/1‑140
                                    AAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTG                                                                                                         >  2:1582878/1‑140
                                     AGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGC                                                                                                        <  2:273896/140‑1
                                      GGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCA                                                                                                       <  1:694038/140‑1
                                         ATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGAC                                                                                                    <  1:1582878/140‑1
                                         ATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGAC                                                                                                    <  2:1289739/140‑1
                                          TTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACA                                                                                                   <  1:174585/140‑1
                                           TTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACAC                                                                                                  <  1:1461508/140‑1
                                           TTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACAC                                                                                                  <  2:1431661/140‑1
                                                 ACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGAT                                                                                            >  1:922823/1‑140
                                                 ACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGAT                                                                                            <  1:237435/140‑1
                                                 ACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGAT                                                                                            >  2:937841/1‑140
                                                   CGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAA                                                                                          <  1:832781/140‑1
                                                    GGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAAC                                                                                         >  1:1211342/1‑140
                                                    GGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAAC                                                                                         >  1:1343849/1‑140
                                                    GGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAAC                                                                                         >  1:393314/1‑140
                                                     GCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACAC                                                                                                  >  2:1254122/1‑130
                                                     GCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCA                                                                                                       >  2:709603/1‑125
                                                     GCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCA                                                                                                       <  1:709603/125‑1
                                                      CTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACAC                                                                                                  >  2:691881/1‑129
                                                      CTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACAC                                                                                                  <  1:1513097/129‑1
                                                      CTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACAC                                                                                                  >  2:1513097/1‑129
                                                       TTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGA                                                                                      <  1:877189/140‑1
                                                        TGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGAT                                                                                     <  1:949711/140‑1
                                                         GTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATC                                                                                    <  2:1543891/140‑1
                                                                AAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAA                                                                             <  1:1486605/140‑1
                                                                   TGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGTGATAACTGATCGTGTCAATGA                                                                          <  1:1532492/140‑1
                                                                     CCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACA                                                                        <  1:180150/140‑1
                                                                     CCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATGTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGAGTCAATGACA                                                                        <  2:1236552/140‑1
                                                                              GACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATG                                                               >  1:314752/1‑140
                                                                                CAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGAC                                                             <  2:314752/140‑1
                                                                                CAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGAC                                                             <  2:1119763/140‑1
                                                                                 AAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGAC                                                             <  1:1660101/140‑1
                                                                                   ATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGA                                                          <  1:45215/140‑1
                                                                                   ATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAAT                                                                            >  1:1044830/1‑122
                                                                                   ATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAAT                                                                            <  2:1044830/122‑1
                                                                                    TGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGAT                                                         >  1:1519066/1‑140
                                                                                     GTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATT                                                        <  2:1519066/140‑1
                                                                                        GCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTG                                                     >  1:330717/1‑140
                                                                                        GCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTG                                                     >  2:1458413/1‑140
                                                                                         CC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTCCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAA                                                                  >  2:1411950/1‑126
                                                                                              TTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTG                                                     <  1:785534/135‑1
                                                                                              TTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTG                                                     >  2:785534/1‑135
                                                                                               TTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGA                                               <  1:359720/140‑1
                                                                                                 CATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATT                                                        >  2:541053/1‑129
                                                                                                 CATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATT                                                        <  1:541053/129‑1
                                                                                                         CGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAA                                     <  2:286489/140‑1
                                                                                                                     TTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGT                         >  1:491731/1‑140
                                                                                                                      TGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTG                        <  2:922823/140‑1
                                                                                                                        CC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGAC                      >  2:1554161/1‑140
                                                                                                                         C‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACG                     <  2:491731/140‑1
                                                                                                                           TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGT                    <  2:1668021/140‑1
                                                                                                                            TTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTA                   <  2:200255/140‑1
                                                                                                                              TTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACT                 >  1:46428/1‑140
                                                                                                                                 TTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCA              <  2:393314/140‑1
                                                                                                                                   CGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAGG            >  1:1206926/1‑140
                                                                                                                                     CCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAGGAA          <  2:1602226/140‑1
                                                                                                                                             TTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAGGAACTAATTGA  <  2:200610/140‑1
                                                                                                                                                                                                                                                                                         
ACAATATATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCC‑ATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3363140‑3363001
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAGGAACTAATTGA  >  NC_000913/3766087‑3766225

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.