BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,649,755	G→T	M49I (ATG→ATT)	dicB →	Qin prophage; cell division inhibition protein DicB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,649,755	0	G	T	100.0%	422.0 / NA	120	M49I (ATG→ATT)	dicB	Qin prophage; cell division inhibition protein DicB
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (52/68); total (52/68)

Only 100 of 120 total aligned reads displayed.

TTACCAAACGTTAATACGTCTGAAGGTTGTTTTGAAATTGGTGTCACTATCAGTAACCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATGCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGATATTGCAGTCAGTGTTCACAGGACAATGCAGGAGTGT  >  NC_000913/1649621‑1649889

ttaCCAAACGTTAATACGTCTGAAGGTTGTTTTGAAATTGGTGTCACTATCAGTAACCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGc                                                                                                                                   <  2:701608/140‑1 (MQ=255)

ttaCCAAACGTTAATACGTCTGAAGGTTGTTTTGAAATTGGTGTCACTATCAGTAACCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGc                                                                                                                                   <  2:177291/140‑1 (MQ=255)

ttaCCAAACGTTAATACGTCTGAAGGTTGTTTTGAAATTGGTGTCACTATCAGTAACCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGc                                                                                                                                   <  1:1551593/140‑1 (MQ=255)

     aaaCGTTAATACGTCTGAAGGTTGTTTTGAAATTGGTGTCACTATCAGTAACCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGtt                                                                                                                              <  2:1634900/140‑1 (MQ=255)

      aaCGTTAATACGTCTGAAGGTTGTTTTGAAATTGGTGTCACTATCAGTAACCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGc                                                                                                                                   >  2:256180/1‑134 (MQ=255)

      aaCGTTAATACGTCTGAAGGTTGTTTTGAAATTGGTGTCACTATCAGTAACCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGttt                                                                                                                             >  2:540781/1‑140 (MQ=255)

      aaCGTTAATACGTCTGAAGGTTGTTTTGAAATTGGTGTCACTATCAGTAACCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGttt                                                                                                                             >  2:889433/1‑140 (MQ=255)

          ttAATACGTCTGAAGGTTGTTTTGAAATTGGTGTCACTATCAGTAACCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGt                                                                                                                         <  1:84764/140‑1 (MQ=255)

            aaTACGTCTGAAGGTTGTTTTGAAATTGGTGTCACTATCAGTAACCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCt                                                                                                                       >  1:1337385/1‑140 (MQ=255)

            aaTACGTCTGAAGGTTGTTTTGAAATTGGTGTCACTATCAGTAACCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCt                                                                                                                       <  2:1690510/140‑1 (MQ=255)

             aTACGTCTGAAGGTTGTTTTGAAATTGGTGTCACTATCAGTAACCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTg                                                                                                                      <  2:1320168/140‑1 (MQ=255)

             aTACGTCTGAAGGTTGTTTTGAAATTGGTGTCACTATCAGTAACCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTg                                                                                                                      <  2:1337385/140‑1 (MQ=255)

              tACGTCTGAAGGTTGTTTTGAAATTGGTGTCACTATCAGTAACCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGa                                                                                                                     <  2:214738/140‑1 (MQ=255)

                  tCTGAAGGTTGTTTTGAAATTGGTGTCACTATCAGTAACCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGt                                                                                                                         <  2:254747/132‑1 (MQ=255)

                  tCTGAAGGTTGTTTTGAAATTGGTGTCACTATCAGTAACCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGt                                                                                                                         >  1:254747/1‑132 (MQ=255)

                  tCTGAAGGTTGTTTTGAAATTGGTGTCACTATCAGTAACCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGa                                                                                                                     >  2:1559132/1‑136 (MQ=255)

                  tCTGAAGGTTGTTTTGAAATTGGTGTCACTATCAGTAACCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGa                                                                                                                     <  1:1559132/136‑1 (MQ=255)

                  tCTGAAGGTTGTTTTGAAATTGGTGTCACTATCAGTAACCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGcc                                                                                                                 >  1:930218/1‑140 (MQ=255)

                   cTGAAGGTTGTTTTGAAATTGGTGTCACTATCAGTAACCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCa                                                                                                                >  2:1418799/1‑140 (MQ=255)

                   cTGAAGGTTGTTTTGAAATTGGTGTCACTATCAGTAACCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCa                                                                                                                >  1:991605/1‑140 (MQ=255)

                   cTGAAGGTTGTTTTGAAATTGGTGTCACTATCAGTAACCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCa                                                                                                                >  1:389581/1‑140 (MQ=255)

                      aaGGTTGTTTTGAAATTGGTGTCACTATCAGTAACCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCaaaa                                                                                                             >  2:748024/1‑140 (MQ=255)

                        ggTTGTTTTGAAATTGGTGTCACTATCAGTAACCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAgg                                                                                                           <  1:1567926/140‑1 (MQ=255)

                           tgttTTGAAATTGGTGTCACTATCAGTAACCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCaaa                                                                                                              >  2:1556004/1‑134 (MQ=255)

                            gttTTGAAATTGGTGTCACTATCAGTAACCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGAtgt                                                                                                       <  2:1601839/140‑1 (MQ=255)

                             ttttGAAATTGGTGTCACTATCAGTAACCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGAtgtg                                                                                                      >  2:72602/1‑140 (MQ=255)

                             ttttGAAATTGGTGTCACTATCAGTAACCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGAtgtg                                                                                                      <  1:482749/140‑1 (MQ=255)

                                tGAAATTGGTGTCACTATCAGTAACCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGcac                                                                                                   <  2:462601/140‑1 (MQ=255)

                                 gAAATTGGTGTCACTATCAGTAACCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGcaca                                                                                                  <  2:1142636/140‑1 (MQ=255)

                                  aaaTTGGTGTCACTATCAGTAACCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACaa                                                                                                 >  2:1089526/1‑140 (MQ=255)

                                  aaaTTGGTGTCACTATCAGTAACCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGCGCACaa                                                                                                 <  2:1596157/140‑1 (MQ=255)

                                   aaTTGGTGTCACTATCAGTAACCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAAt                                                                                                <  2:263655/140‑1 (MQ=255)

                                    aTTGGTGTCACTATCAGTAACCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATg                                                                                               >  1:221086/1‑140 (MQ=255)

                                       ggTGTCACTATCAGTAACCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAAt                                                                                            >  2:1238742/1‑140 (MQ=255)

                                            cACTATCAGTAACCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGc                                                                                       <  2:1003516/140‑1 (MQ=255)

                                              cTATCAGTAACCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCAt                                                                                     <  2:568934/140‑1 (MQ=255)

                                              cTATCAGTAACCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCAt                                                                                     <  1:551319/140‑1 (MQ=255)

                                               tATCAGTAACCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCAtt                                                                                    <  1:1238742/140‑1 (MQ=255)

                                                    gTAACCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGc                                                                               >  2:454896/1‑140 (MQ=255)

                                                       aCCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAAtt                                                                                           >  1:1632238/1‑125 (MQ=255)

                                                       aCCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCAtt                                                                                    <  2:1057600/132‑1 (MQ=255)

                                                       aCCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCAtt                                                                                    >  1:1057600/1‑132 (MQ=255)

                                                       aCCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTg                                                                            >  2:1532848/1‑140 (MQ=255)

                                                           aGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCt                                                                        <  2:1279478/140‑1 (MQ=255)

                                                           aGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCt                                                                        >  2:94400/1‑140 (MQ=255)

                                                           aGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCt                                                                        >  2:649759/1‑140 (MQ=255)

                                                           aGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCt                                                                        >  2:642278/1‑140 (MQ=255)

                                                             tATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGa                                                                      <  1:1089526/140‑1 (MQ=255)

                                                             tATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGa                                                                      >  1:577227/1‑140 (MQ=255)

                                                             tATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGa                                                                      <  2:211423/140‑1 (MQ=255)

                                                               tttACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACa                                                                    >  2:661151/1‑140 (MQ=255)

                                                                  aCTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGtt                                                                 >  2:1035244/1‑140 (MQ=255)

                                                                  aCTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGtt                                                                 >  2:1161322/1‑140 (MQ=255)

                                                                  aCTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGtt                                                                 >  2:1262024/1‑140 (MQ=255)

                                                                       aGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCt                                                            >  2:76985/1‑140 (MQ=255)

                                                                       aGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCt                                                            <  1:642278/140‑1 (MQ=255)

                                                                          tGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGt                                                         >  2:1065567/1‑140 (MQ=255)

                                                                                tAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCgg                                                   <  2:295869/140‑1 (MQ=255)

                                                                                tAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCgg                                                   >  1:797973/1‑140 (MQ=255)

                                                                                    aaGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGagag                                               <  1:1059567/140‑1 (MQ=255)

                                                                                     agagAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGc                                              <  1:540781/140‑1 (MQ=255)

                                                                                      gagaAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGcc                                             >  2:935559/1‑140 (MQ=255)

                                                                                      gagaAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGcc                                             <  1:1532848/140‑1 (MQ=255)

                                                                                       agaAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCa                                            >  1:804024/1‑140 (MQ=255)

                                                                                         aaaaCAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGt                                          >  1:473842/1‑140 (MQ=255)

                                                                                              aaGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGata                                     <  2:577227/140‑1 (MQ=255)

                                                                                                gAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGATAtt                                   >  1:981536/1‑140 (MQ=255)

                                                                                                 aaCGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGATTCCGGAGAGCCAGTTGATATTg                                  >  2:905804/1‑140 (MQ=255)

                                                                                                  aCGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGATATTGc                                 <  1:76270/140‑1 (MQ=255)

                                                                                                   cGGGAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGATATTGca                                >  1:540415/1‑140 (MQ=255)

                                                                                                    gggAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGATTCCGGAGAGCCAGTTGATATTGcag                               <  1:905804/140‑1 (MQ=255)

                                                                                                     ggAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGATATTGcagt                              <  2:981536/140‑1 (MQ=255)

                                                                                                     ggAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGATATTGcagt                              <  1:935559/140‑1 (MQ=255)

                                                                                                      gAGCTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGATATTGcagtc                             >  2:1261412/1‑140 (MQ=255)

                                                                                                         cTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGATATTGcagtcagt                          <  1:748024/140‑1 (MQ=255)

                                                                                                         cTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGATATTGcagtcagt                          <  2:453925/140‑1 (MQ=255)

                                                                                                         cTATTAAATAAAATATGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGATATTGcagtcagt                          <  1:889433/140‑1 (MQ=255)

                                                                                                              aaataaaataTGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGATATTGCAGTCAGTGTTca                     >  1:1476569/1‑140 (MQ=255)

                                                                                                                   aaataTGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGATATTGCAGTCAGTGTTCACAGGa                <  2:297898/140‑1 (MQ=255)

                                                                                                                   aaataTGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGATATTGCAGTCAGTGTTCACAGGa                <  1:1261412/140‑1 (MQ=255)

                                                                                                                   aaataTGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGATATTGCAGTCAGTGTTCACAGGa                <  1:76985/140‑1 (MQ=255)

                                                                                                                   aaataTGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGATATTGCAGTCAGTGTTCACAGGa                <  1:1262024/140‑1 (MQ=255)

                                                                                                                   aaataTGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGATATTGCAGTCAGTGTTCACAGGa                <  1:649759/140‑1 (MQ=255)

                                                                                                                   aaataTGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGATATTGCAGTCAGTGTTCACAGGa                <  1:39034/140‑1 (MQ=255)

                                                                                                                    aataTGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGATATTGCAGTCAGTGTTCACAGGAc               >  2:362358/1‑140 (MQ=255)

                                                                                                                    aataTGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGATATTGCAGTCAGTGTTCACAGGAc               >  2:1435798/1‑140 (MQ=255)

                                                                                                                        tGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGATATTGCAGTCAGTGTTCACAGGACAATg           <  1:1035244/140‑1 (MQ=255)

                                                                                                                        tGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGATATTGCAGTCAGTGTTCACAGGACAATg           <  1:454896/140‑1 (MQ=255)

                                                                                                                        tGCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGATATTGCAGTCAGTGTTCACAGGACAATg           <  1:362358/140‑1 (MQ=255)

                                                                                                                         gCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGATATTGcagtcagt                          >  2:1284127/1‑124 (MQ=255)

                                                                                                                         gCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGATATTGcagtcagt                          <  1:1284127/124‑1 (MQ=255)

                                                                                                                         gCATTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGATATTGCAGTCAGTGTTCACAGGACAATGc          >  1:381200/1‑140 (MQ=255)

                                                                                                                           aTTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGATATTGCAGTCAGTGTTCACAGGACAATGCAg        <  1:1161322/140‑1 (MQ=255)

                                                                                                                           aTTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGATATTGCAGTCAGTGTTCACAGGACAATGCAg        <  1:356107/140‑1 (MQ=255)

                                                                                                                           aTTGTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGATATTGCAGTCAGTGTTCACAGGACAATGCAg        <  2:381200/140‑1 (MQ=255)

                                                                                                                              gTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGATATTGCAGTCAGTGTTCACAGGACAATGCAg        >  1:1530842/1‑137 (MQ=255)

                                                                                                                              gTTTCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGATATTGCAGTCAGTGTTCACAGGACAATGCAg        <  1:650303/137‑1 (MQ=255)

                                                                                                                               tttCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGATATTGCAGTCAGTGTTCACAGGACAATGCAGGAgt    >  1:1000647/1‑140 (MQ=255)

                                                                                                                               tttCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGATATTGCAGTCAGTGTTCACAGGACAATGCAGGAgt    >  2:1090052/1‑140 (MQ=255)

                                                                                                                                 tCAATTCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGATATTGCAGTCAGTGTTCACAGGACAATGCAGGAgtgt  >  2:1341950/1‑140 (MQ=255)

TTACCAAACGTTAATACGTCTGAAGGTTGTTTTGAAATTGGTGTCACTATCAGTAACCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATGCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGATATTGCAGTCAGTGTTCACAGGACAATGCAGGAGTGT  >  NC_000913/1649621‑1649889

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`