| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3653230 | NA (NA) | 91 (1.230) | 50/276 | 0.3 | 96.8% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 3766089 | 3 (0.040) | coding (3907/4134 nt) | rhsA | rhs element protein RhsA | |||||
Only 100 of 213 total aligned reads displayed.
GCCAATTCCATGGCCCAAAAGCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAGGAACTAATTGATT > NC_000913/3765950‑3766227 | gCCAATTCCATGGCCCAAAAGCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAg > 2:354521/1‑140 (MQ=255)gCCAATTCCATGGCCCAAAAGCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAg > 2:241709/1‑140 (MQ=255)gCCAATTCCATGGCCCAAAAGCCCTGCACAGCAACAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAg > 1:1047073/1‑140 (MQ=255) tatatagtcgtaacagccatttttttcttcagaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGa > 1:1018586‑M2/137‑140 (MQ=255) cAATTCCATGGCCCAAAAGCCCTGCACAGCAACAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGgg > 2:1047073‑M2/1‑138 (MQ=255) atatagtcgtaacagccatttttttcttcagaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGat < 1:604607‑M2/5‑1 (MQ=255) atatagtcgtaacagccatttttttcttcagaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGat > 1:1155660‑M2/136‑140 (MQ=255) atagtcgtaacagccatttttttcttcagaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGatat < 2:1170248‑M2/7‑1 (MQ=255) atagtcgtaacagccatttttttcttcagaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGatat < 1:591354‑M2/7‑1 (MQ=255) atagtcgtaacagccatttttttcttcagaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGatat < 2:1132777‑M2/7‑1 (MQ=255) agtcgtaacagccatttttttcttcagaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATaa > 2:167831‑M2/132‑140 (MQ=255) ccATGGCCCAAAAGCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggt > 2:254843‑M2/1‑133 (MQ=255) tGGCCCAAAAGCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcg < 2:291595‑M2/140‑11 (MQ=255) taacagccatttttttcttcagaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAAc < 1:833922‑M2/10‑1 (MQ=255) taacagccatttttttcttcagaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATg > 2:714079‑M2/127‑140 (MQ=255) ggCCCAAAAGCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcga < 1:845468‑M2/140‑12 (MQ=255) ggCCCAAAAGCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcga < 1:1118417‑M2/140‑12 (MQ=255) acagccatttttttcttcagaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGAt > 1:117916‑M2/125‑140 (MQ=255) acagccatttttttcttcagaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGAt > 1:257605‑M2/125‑140 (MQ=255) aaaaGCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaag > 2:702181‑M2/1‑124 (MQ=255) aaaGCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagt < 1:334090‑M2/140‑18 (MQ=255) aaaGCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGgg > 2:130572‑M2/1‑123 (MQ=255) catttttttcttcagaaggaatttttgaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCtt < 1:213183‑M2/21‑1 (MQ=255) aGCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtcc > 1:267804‑M2/1‑121 (MQ=255) ccTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctg < 2:1083899‑M2/140‑23 (MQ=255) cTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctga < 1:551190‑M2/140‑24 (MQ=255) tGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgat > 1:2739‑M2/1‑116 (MQ=255) cacaGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatat > 1:967208‑M2/1‑114 (MQ=255) cacaGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatat > 1:159309‑M2/1‑114 (MQ=255) cttcagaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGaa < 1:167831‑M2/30‑1 (MQ=255) aaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTtct < 2:978093‑M2/23‑1 (MQ=255) aaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTg > 2:93501‑M2/105‑140 (MQ=255) aaggaattttaaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTg > 2:519297‑M2/105‑140 (MQ=255) atttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGac < 2:117916‑M2/41‑1 (MQ=255) aagATGATAACGCTGCAAAAGCAGTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaacgtgcgaacaagtccctgatatgagatcatgttt > 1:706444‑M2/2‑102 (MQ=255) tttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGAcaca < 1:663045‑M2/44‑1 (MQ=255) tttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGAcaca < 2:606301‑M2/44‑1 (MQ=255) atgatAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgat > 2:960835‑M2/1‑99 (MQ=255) atgatAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgat < 1:960835‑M2/123‑25 (MQ=255) aaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAggg < 1:300676‑M2/47‑1 (MQ=255) ccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGacac < 2:1258871‑M2/43‑1 (MQ=255) ccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGacac > 1:1258871‑M2/91‑133 (MQ=255) ccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATa > 2:420466‑M2/91‑140 (MQ=255) aTGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgg > 2:334090‑M2/1‑93 (MQ=255) gcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGacac < 1:1200655‑M2/43‑1 (MQ=255) cttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATCATAGCTTCTCGTGGAAATGTTGCAGacac < 2:1009111‑M2/43‑1 (MQ=255) gcAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcca > 2:102012‑M2/1‑88 (MQ=255) aGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaa > 1:1196687‑M2/1‑83 (MQ=255) gCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaac > 1:1022465‑M2/1‑82 (MQ=255) agaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTc < 1:93501‑M2/62‑1 (MQ=255) tGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg > 1:1235331‑M2/1‑78 (MQ=255) tgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGAt < 2:833576‑M2/56‑1 (MQ=255) gcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGAc > 1:358291‑M2/73‑140 (MQ=255) cctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACa < 1:816729‑M2/69‑1 (MQ=255) cctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACa > 1:23648‑M2/72‑140 (MQ=255) tgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACata < 1:1007421‑M2/71‑1 (MQ=255) gacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATg > 1:981327‑M2/63‑140 (MQ=255) gAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtc > 2:1198934‑M2/1‑65 (MQ=255) gAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtc > 1:241709‑M2/1‑65 (MQ=255) caaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGAc < 1:478979‑M2/80‑1 (MQ=255) atgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGAc > 2:184252‑M2/58‑137 (MQ=255) tACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaac < 1:617138‑M2/140‑82 (MQ=255) tACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaac < 2:851215‑M2/140‑82 (MQ=255) gccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTg > 2:343178‑M2/53‑140 (MQ=255) gccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTg > 2:1241237‑M2/53‑140 (MQ=255) ccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATaaa < 2:443473‑M2/76‑1 (MQ=255) ccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATaaa > 1:443473‑M2/52‑127 (MQ=255) tCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacctt < 1:385430‑M2/140‑89 (MQ=255) caAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgc < 1:543328‑M2/140‑92 (MQ=255) aaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGaa > 2:165206‑M2/41‑140 (MQ=255) aagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGaaa > 2:1230405‑M2/40‑140 (MQ=255) gtagcaatgttgccttttttttcgccaattactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAAccc < 2:23648‑M2/107‑1 (MQ=255) ctctctAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattca > 1:1226729‑M2/1‑35 (MQ=255) tctAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagca < 2:96698‑M2/140‑109 (MQ=255) ctAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcag > 1:762647‑M2/1‑31 (MQ=255) aatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGG‑AAAAACCCGACAGa > 2:1090189‑M2/29‑140 (MQ=255) gttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGAtg < 2:237278‑M2/115‑1 (MQ=255) gttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGAtg > 1:237278‑M2/26‑140 (MQ=255) tGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgc < 2:894468‑M2/140‑117 (MQ=255) tGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgc < 2:113876‑M2/140‑117 (MQ=255) ttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGt > 2:808106‑M2/20‑140 (MQ=255) aataatCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgctg < 1:575566‑M2/140‑119 (MQ=255) ataatCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgt > 2:385430‑M2/1‑21 (MQ=255) ataatCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgt > 2:551190‑M2/1‑21 (MQ=255) taatCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaatt < 2:1219772‑M2/123‑104 (MQ=255) tCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcaga < 2:684325‑M2/140‑124 (MQ=255) tCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcaga < 1:528427‑M2/140‑124 (MQ=255) tCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcaga < 2:230059‑M2/140‑124 (MQ=255) tcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGG‑AAAAACCCGACAGATGTGACGTACTTCAgg < 1:1090189‑M2/128‑1 (MQ=255) cgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAgg < 1:687720‑M2/129‑1 (MQ=255) cgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAgg < 1:343178‑M2/129‑1 (MQ=255) gccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAGGa < 1:714079‑M2/130‑1 (MQ=255) gACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagac > 2:773034‑M2/1‑12 (MQ=255) gACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagac > 1:853084‑M2/1‑12 (MQ=255) gACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagac < 2:853084‑M2/136‑125 (MQ=255) gACTAGCAATAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccaga < 2:268562‑M2/140‑129 (MQ=255) tAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaa > 1:230059‑M2/1‑9 (MQ=255) gCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaaga < 1:906726‑M2/140‑134 (MQ=255) aGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAGGAACTAattgatt < 2:476460/140‑1 (MQ=255) aGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAGGAACTAattgatt < 1:1230405/140‑1 (MQ=255) | GCCAATTCCATGGCCCAAAAGCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAGGAACTAATTGATT > NC_000913/3765950‑3766227 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |