BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,619,105	G→T	intergenic (‑197/‑15)	marC ← / → marR	inner membrane protein MarC/DNA‑binding transcriptional repressor MarR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,619,105	0	G	T	100.0%	471.9 / NA	132	intergenic (‑197/‑15)	marC/marR	inner membrane protein MarC/DNA‑binding transcriptional repressor MarR
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (63/69); total (63/69)

Only 100 of 132 total aligned reads displayed.

AAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGC  >  NC_000913/1618971‑1619241

aaGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAgg                                                                                                                                     >  2:928727/1‑140 (MQ=255)

    gtCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCaa                                                                                                                                 <  1:1048772/140‑1 (MQ=255)

    gtCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCaa                                                                                                                                 <  1:497315/140‑1 (MQ=255)

    gtCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCaa                                                                                                                                 <  1:127049/140‑1 (MQ=255)

     tCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAg                                                                                                                                      >  1:992038/1‑134 (MQ=255)

     tCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAAc                                                                                                                                >  2:467149/1‑140 (MQ=255)

     tCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAAc                                                                                                                                <  2:442078/140‑1 (MQ=255)

     tCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAAc                                                                                                                                >  1:1839890/1‑140 (MQ=255)

       aCTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTa                                                                                                                              >  2:1695595/1‑140 (MQ=255)

       aCTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTa                                                                                                                              >  2:1318196/1‑140 (MQ=255)

       aCTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTa                                                                                                                              >  1:1116436/1‑140 (MQ=255)

              agctagcCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGaa                                                                                                                       <  1:1773264/140‑1 (MQ=255)

                 tagcCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAg                                                                                                                    <  2:1095178/140‑1 (MQ=255)

                   gcCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTa                                                                                                                  >  1:1024133/1‑140 (MQ=255)

                   gcCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTa                                                                                                                  >  1:429500/1‑140 (MQ=255)

                   gcCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTa                                                                                                                  >  1:1790222/1‑140 (MQ=255)

                    ccTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGaaa                                                                                                                      <  1:318120/135‑1 (MQ=255)

                    ccTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGaaa                                                                                                                      >  2:318120/1‑135 (MQ=255)

                     cTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGaaa                                                                                                                      <  1:680544/134‑1 (MQ=255)

                     cTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGaaa                                                                                                                      >  2:680544/1‑134 (MQ=255)

                     cTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAg                                                                                                                    <  1:736414/136‑1 (MQ=255)

                     cTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAg                                                                                                                    >  2:736414/1‑136 (MQ=255)

                       tGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAg                                                                                                              >  1:612870/1‑140 (MQ=255)

                         cATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCg                                                                                                            >  1:140306/1‑140 (MQ=255)

                          aTCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGa                                                                                                           <  2:922091/140‑1 (MQ=255)

                           tCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTGCTTTCCAGGGCAACTAAAGTGAAAAGTACCAGCGAt                                                                                                          <  2:1624766/140‑1 (MQ=255)

                           tCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGAt                                                                                                          <  1:1092577/140‑1 (MQ=255)

                              cATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTg                                                                                                       <  1:1110403/140‑1 (MQ=255)

                              cATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTg                                                                                                       >  2:194285/1‑140 (MQ=255)

                                ttGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGtt                                                                                                     <  2:429500/140‑1 (MQ=255)

                                   aaCAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCaa                                                                                                  <  2:739474/140‑1 (MQ=255)

                                   aaCAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCaa                                                                                                  <  1:1235851/140‑1 (MQ=255)

                                   aaCAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCaa                                                                                                  <  1:1126701/140‑1 (MQ=255)

                                   aaCAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCaa                                                                                                  <  1:185753/140‑1 (MQ=255)

                                           ttGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAatta                                                                                          <  2:1116436/140‑1 (MQ=255)

                                           ttGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAatta                                                                                          <  1:1512011/140‑1 (MQ=255)

                                           ttGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAatta                                                                                          <  1:928727/140‑1 (MQ=255)

                                             gAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGAt                                                                                                          <  2:908177/122‑1 (MQ=255)

                                             gAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGAt                                                                                                          >  1:908177/1‑122 (MQ=255)

                                             gAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAattatt                                                                                        >  2:1383332/1‑140 (MQ=255)

                                             gAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAattatt                                                                                        >  1:476044/1‑140 (MQ=255)

                                             gAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAattatt                                                                                        >  2:858953/1‑140 (MQ=255)

                                             gAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAattatt                                                                                        >  2:1506743/1‑140 (MQ=255)

                                               aCCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAatta                                                                                          <  2:370443/136‑1 (MQ=255)

                                               aCCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAatta                                                                                          >  1:370443/1‑136 (MQ=255)

                                               aCCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTcc                                                                                      >  1:1551962/1‑140 (MQ=255)

                                                   aTTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTg                                                                                  >  1:1850372/1‑140 (MQ=255)

                                                     ttAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTggg                                                                                <  2:476044/140‑1 (MQ=255)

                                                     ttAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTggg                                                                                <  1:858953/140‑1 (MQ=255)

                                                      tAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGt                                                                               <  2:336076/140‑1 (MQ=255)

                                                         cAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGc                                                                            <  2:1551962/140‑1 (MQ=255)

                                                         cAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGc                                                                            <  2:1024133/140‑1 (MQ=255)

                                                          aaaaCGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCt                                                                           <  1:256780/140‑1 (MQ=255)

                                                           aaaCGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCtt                                                                          <  2:612870/140‑1 (MQ=255)

                                                            aaCGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTa                                                                         <  2:1469586/140‑1 (MQ=255)

                                                            aaCGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTa                                                                         <  2:140306/140‑1 (MQ=255)

                                                            aaCGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTa                                                                         <  1:211909/140‑1 (MQ=255)

                                                            aaCGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTa                                                                         <  1:1695595/140‑1 (MQ=255)

                                                             aCGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTaa                                                                        <  1:183752/140‑1 (MQ=255)

                                                             aCGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTaa                                                                        >  1:1577752/1‑140 (MQ=255)

                                                              cGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTgg                                                                                 <  2:859170/130‑1 (MQ=255)

                                                              cGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTgg                                                                                 >  1:859170/1‑130 (MQ=255)

                                                              cGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCg                                                                             <  1:1618587/134‑1 (MQ=255)

                                                              cGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCg                                                                             >  2:1618587/1‑134 (MQ=255)

                                                              cGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGc                                                                            <  2:1557795/135‑1 (MQ=255)

                                                              cGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAAt                                                                       >  2:1088274/1‑140 (MQ=255)

                                                                  gCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACT‑ATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCata                                                                  >  2:14671/1‑140 (MQ=255)

                                                                        gTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGtt                                                             >  2:1176126/1‑140 (MQ=255)

                                                                        gTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGtt                                                             <  1:1088274/140‑1 (MQ=255)

                                                                           aaTTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACT‑ATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATc                                                         <  1:14671/140‑1 (MQ=255)

                                                                            attcattcATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATc                                                         <  1:1004798/140‑1 (MQ=255)

                                                                                attcattTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCagaa                                                     <  1:1035275/140‑1 (MQ=255)

                                                                                attcattTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCagaa                                                     <  2:1850372/140‑1 (MQ=255)

                                                                                             ataCTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTg                                        <  2:1838404/140‑1 (MQ=255)

                                                                                               aCTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCt                                      <  2:662982/140‑1 (MQ=255)

                                                                                                   gCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAAc                                  >  2:528190/1‑140 (MQ=255)

                                                                                                   gCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAAc                                  >  1:133521/1‑140 (MQ=255)

                                                                                                   gCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAAc                                  <  1:528190/140‑1 (MQ=255)

                                                                                                   gCCTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAAc                                  <  1:1506743/140‑1 (MQ=255)

                                                                                                    ccTGGGCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACg                                 >  1:765102/1‑140 (MQ=255)

                                                                                                       gggCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGt                              >  1:404401/1‑140 (MQ=255)

                                                                                                        ggCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCATGCTTa                                    <  1:1328992/133‑1 (MQ=255)

                                                                                                        ggCAATATTATCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCATGCTTa                                    >  2:1328992/1‑133 (MQ=255)

                                                                                                             tattatCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGt                        >  2:1365168/1‑140 (MQ=255)

                                                                                                                  tCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCg                   >  1:18382/1‑140 (MQ=255)

                                                                                                                  tCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCg                   <  2:1839890/140‑1 (MQ=255)

                                                                                                                  tCCCCTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCg                   >  2:1131183/1‑140 (MQ=255)

                                                                                                                    cccTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCt                 <  1:1445911/140‑1 (MQ=255)

                                                                                                                     ccTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTa                             <  2:1340055/127‑1 (MQ=255)

                                                                                                                     ccTGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTa                             >  1:1340055/1‑127 (MQ=255)

                                                                                                                       tGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGa              >  2:351908/1‑140 (MQ=255)

                                                                                                                       tGCAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGa              >  2:670222/1‑140 (MQ=255)

                                                                                                                         cAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCg                   >  2:1168163/1‑133 (MQ=255)

                                                                                                                         cAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCg                   <  1:1168163/133‑1 (MQ=255)

                                                                                                                         cAACTAATTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGata            >  1:558032/1‑140 (MQ=255)

                                                                                                                               aTTACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACcg      <  1:671633/140‑1 (MQ=255)

                                                                                                                                ttACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGTTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACcgc     >  2:1520288/1‑140 (MQ=255)

                                                                                                                                ttACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACcgc     >  2:780386/1‑140 (MQ=255)

                                                                                                                                 tACTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACcgcg    >  1:563721/1‑140 (MQ=255)

                                                                                                                                   cTTTCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGc  <  1:1084032/140‑1 (MQ=255)

AAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGC  >  NC_000913/1618971‑1619241

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`