| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,402,994 | C→A | K113N (AAG→AAT) | csrD ← | regulator of CsrB and CsrC decay |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,402,994 | 0 | C | A | 99.0% | 346.6 / NA | 98 | K113N (AAG→AAT) | csrD | regulator of CsrB and CsrC decay |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base A (53/44); total (54/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ACCAGCGTACCGCCAGGAAGAGCATAACAATGATAAAGCCAATCGCCCCCGTGAGCGGCGCGGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGCTTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCAGGGTATAAACCTGTTTATCACCATGGAGCAGGTCTACACGAACGATATCTGCCGACATCATT > NC_000913/3402861‑3403129 | aCCAGCGTACCGCCAGGAAGAGCATAACAATGATAAAGCCAATCGCCCCCGTGAGCGGCGCGGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATc > 2:1187927/1‑140 (MQ=255) ccAGCGTACCGCCAGGAAGAGCATAACAATGATAAAGCCAATCGCCCCCGTGAGCGGCGCGGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCa < 1:981827/140‑1 (MQ=255) cGTACCGCCAGGAAGAGCATAACAATGATAAAGCCAATCGCCCCCGTGAGCGGCGCGGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACgg > 1:7262/1‑140 (MQ=255) cGTACCGCCAGGAAGAGCATAACAATGATAAAGCCAATCGCCCCCGTGAGCGGCGCGGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATCTATCAACgg > 1:198226/1‑140 (MQ=255) gTACCGCCAGGAAGAGCATAACAATGATAAAGCCAATCGCCCCCGTGAGCGGCGCGGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGa < 2:7262/140‑1 (MQ=255) tACCGCCAGGAAGAGCATAACAATGATAAAGCCAATCGCCCCCGTGAGCGGCGCGGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGaa > 1:1429432/1‑140 (MQ=255) aCCGCCAGGAAGAGCATAACAATGATAAAGCCAATCGCCCCCGTGAGCGGCGCGGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAAc > 2:471734/1‑140 (MQ=255) ccAGGAAGAGCATAACAATGATAAAGCCAATCGCCCCCGTGAGCGGCGCGGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCt > 1:1101279/1‑139 (MQ=255) ccAGGAAGAGCATAACAATGATAAAGCCAATCGCCCCCGTGAGCGGCGCGGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCt < 2:1101279/139‑1 (MQ=255) ccAGGAAGAGCATAACAATGATAAAGCCAATCGCCCCCGTGAGCGGCGCGGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTc > 2:802214/1‑140 (MQ=255) ccAGGAAGAGCATAACAATGATAAAGCCAATCGCCCCCGTGAGCGGCGCGGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGACCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTc > 1:1542038/1‑140 (MQ=255) ggAAGAGCATAACAATGATAAAGCCAATCGCCCCCGTGAGCGGCGCGGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGt > 1:429140/1‑140 (MQ=255) cATAACAATGATAAAGCCAATCGCCCCCGTGAGCGGCGCGGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACgg < 1:71760/123‑1 (MQ=255) cATAACAATGATAAAGCCAATCGCCCCCGTGAGCGGCGCGGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACgg > 2:71760/1‑123 (MQ=255) tGATAAAGCCAATCGCCCCCGTGAGCGGCGCGGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGCTTTATCAACGGAACGCTCAGTTCGCGAAACAGATcc > 2:353439/1‑139 (MQ=255) tGATAAAGCCAATCGCCCCCGTGAGCGGCGCGGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAATGCTCAGTTCGCGAAACAGATCg < 2:1153537/140‑1 (MQ=255) tGATAAAGCCAATCGCCCCCGTGAGCGGCGCGGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCg > 1:1337023/1‑140 (MQ=255) tGATAAAGCCAATCGCCCCCGTGAGCGGCGCGGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCg > 1:539292/1‑140 (MQ=255) tGATAAAGCCAATCGCCCCCGTGAGCGGCGCGGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCg > 1:791132/1‑140 (MQ=255) aTAAAGCCAATCGCCCCCGTGAGCGGCGCGGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATctct > 1:136287/1‑140 (MQ=255) aTAAAGCCAATCGCCCCCGTGAGCGGCGCGGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCt > 1:1312322/1‑140 (MQ=255) aTAAAGCCAATCGCCCCCGTGAGCGGCGCGGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCt < 1:1187927/140‑1 (MQ=255) aTAAAGCCAATCGCCCCCGTGAGCGGCGCGGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTAT‑AACGGAACGCTCAGTTCGCGAAACAGATCGCTg > 1:872000/1‑140 (MQ=255) tAAAGCCAATCGCCCCCGTGAGCGGCGCGGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTg > 2:1359791/1‑140 (MQ=255) tAAAGCCAATCGCCCCCGTGAGCGGCGCGGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTg > 1:804407/1‑140 (MQ=255) aGCCAATCGCCCCCGTGAGCGGCGCGGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAg < 1:1143386/140‑1 (MQ=255) gCCAATCGCCCCCGTGAGCGGCGCGGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGc > 2:1373644/1‑140 (MQ=255) gCCAATCGCCCCCGTGAGCGGCGCGGTGGTCATCAACGAATAGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGc > 2:196906/1‑140 (MQ=255) ccAATCGCCCCCGTGAGCGGCGCGGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGcc > 2:1458972/1‑140 (MQ=255) aTCGCCCCCGTGAGCGGCGCGGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAAc > 1:169057/1‑140 (MQ=255) aTCGCCCCCGTGAGCGGCGCGGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAAc > 1:54726/1‑140 (MQ=255) tCGCCCCCGTGAGCGGCGCGGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGa < 2:536527/133‑1 (MQ=255) tCGCCCCCGTGAGCGGCGCGGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGa > 1:536527/1‑133 (MQ=255) tCGCCCCCGTGAGCGGCGCGGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACt > 1:1261091/1‑140 (MQ=255) cGCCCCCGTGAGCGGCGCGGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTg < 1:1344994/140‑1 (MQ=255) cccccGTGAGCGGCGCGGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGa < 2:1429432/140‑1 (MQ=255) ccccGTGAGCGGCGCGGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGAc < 2:791132/140‑1 (MQ=255) cGTGAGCGGCGCGGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGAt > 1:1083276/1‑140 (MQ=255) cGTGAGCGGCGCGGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGAt < 2:1261091/140‑1 (MQ=255) gTGAGCGGCGCGGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATa < 1:909655/140‑1 (MQ=255) tGAGCGGCGCGGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATaa > 1:801854/1‑140 (MQ=255) cggcgCGGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTAc < 2:801854/140‑1 (MQ=255) ggcgCGGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTAcc > 1:586307/1‑140 (MQ=255) ggcgCGGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTAcc > 1:463268/1‑140 (MQ=255) cgGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCAttt < 2:1083276/140‑1 (MQ=255) ggtCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTgg < 1:733149/140‑1 (MQ=255) ggtCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTAT‑AACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGc < 2:872000/140‑1 (MQ=255) gtCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGc > 1:288348/1‑140 (MQ=255) catcaACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCa < 2:1337023/140‑1 (MQ=255) catcaACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCa < 1:253892/140‑1 (MQ=255) catcaACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCa < 2:54726/140‑1 (MQ=255) catcaACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCa < 2:707431/140‑1 (MQ=255) catcaACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCa < 2:1312322/140‑1 (MQ=255) catcaACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCa < 1:1359791/140‑1 (MQ=255) aaCGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCAGGGt > 1:816165/1‑140 (MQ=255) aCGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCAGGGta < 1:1458972/140‑1 (MQ=255) cGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCAGGGtat > 2:963759/1‑140 (MQ=255) aaTGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCAGGGTATaa > 1:778919/1‑140 (MQ=255) gTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATCTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCAGGGTATAAACCTGTTTAt < 2:198226/140‑1 (MQ=255) ttGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCAGGGTATAAACCTGTTTATc > 1:189709/1‑140 (MQ=255) tGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCAGGGTATAAACCTGTTTATCa > 2:26373/1‑140 (MQ=255) gCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCAGGGTATAAACCTGTTTATCAc > 2:975040/1‑140 (MQ=255) cccATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCAGGGTATAAACCTGTTTATCAcc > 2:679862/1‑140 (MQ=255) cccATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCAGGGTATAAACCTGTTTATCAcc > 1:1340585/1‑140 (MQ=255) ccATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCAGGGTATAAAc < 1:1265625/127‑1 (MQ=255) ccATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCAGGGTATAAAc > 2:1265625/1‑127 (MQ=255) ccATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCAGGGTATAAACCTGTTTATCACCa > 2:610487/1‑140 (MQ=255) ccATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCAGGGTATAAACCTGTTTATCACCa < 2:1111630/140‑1 (MQ=255) ccATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCAGGGTATAAACCTGTTTATCACCa < 2:48188/140‑1 (MQ=255) ccATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCAGGGTATAAACCTGTTTATCACCa < 2:463507/140‑1 (MQ=255) ggATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCTCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCAGGGTATAAACCTGTTTATCACCATGGAg < 2:136287/140‑1 (MQ=255) ggATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCAGGGTATAAACCTGTTTATCACCATGGAg < 1:975040/140‑1 (MQ=255) ggATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCAGGGTATAAACCTGTTTATCACCATGGAg < 2:804407/140‑1 (MQ=255) ggATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCAGGGTATAAACCTGTTTATCACCATGGAg < 1:610487/140‑1 (MQ=255) ggATCCTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCAGGGTATAAACCTGTTTATCACCATGGAg < 1:471734/140‑1 (MQ=255) cTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCAGGGTATAAACCTGTTTATCACCa > 2:446862/1‑130 (MQ=255) cTGATAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCAGGGTATAAACCTGTTTATCACCa < 1:446862/130‑1 (MQ=255) tAAACCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCAGGGTATAAACCTGTTTATCACCATGGAGCAGGTCTac > 2:747441/1‑140 (MQ=255) aaCCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCAGGGTATAAACCTGTTTATCACCATGGAGCAGGTCTacac > 2:981331/1‑140 (MQ=255) aCCAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGATGATAACTACCATTTCTGGCCAGGGTATAAACCTGTTTATCACCATGGAGCAGGTCTACacg > 2:414247/1‑140 (MQ=255) ccAGACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCAGGGTATAAACCTGTTTATCACCATGGAGCAGGTCTACacga < 2:833991/140‑1 (MQ=255) gACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCAGGGTATAAACCTGTTTATCACCATGGAGCAGGt < 2:278532/129‑1 (MQ=255) gACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCAGGGTATAAACCTGTTTATCACCATGGAGCAGGt > 1:278532/1‑129 (MQ=255) gACGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCAGGGTATAAACCTGTTTATCACCATGGAGCAGGTCTACacgaacg > 2:916114/1‑140 (MQ=255) aCGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCAGGGTATAAACCTGTTTATCACCATGGAg < 1:244756/123‑1 (MQ=255) aCGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCAGGGTATAAACCTGTTTATCACCATGGAg > 2:244756/1‑123 (MQ=255) cGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCAGGGTATAAACCTGTTTATCACCATGGAGCAGGTCTACACGAACGat > 1:609974/1‑140 (MQ=255) cGCAACGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCAGGGTATAAACCTGTTTAGCACCATGGAGCAGGTCTACACGAACGat > 2:1358176/1‑140 (MQ=255) aCGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCAGGGTATAAACCTGTTTATCACCATGGAGCAGGTCTACACGAACGATATCt > 2:1312271/1‑140 (MQ=255) cGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCAGGGTATAAACCTGTTTATCACCATGGAGCAGGTCTACACGAACGATATCTg < 1:426291/140‑1 (MQ=255) cGACATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCAGGGTATAAACCTGTTTATCACCATGGAGCAGGTCTACACGAACGATATCTg > 2:426291/1‑140 (MQ=255) cATCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCAGGGTATAAACCTGTTTATCACCATGGAGCAGGTCTACACGAACGATATCTGCCg < 2:212757/140‑1 (MQ=255) aTCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCAGGGTATAAACCTGTTTTTCACCATGGAGCAGGTCTACACGAACGATATCTGCCGa > 2:1249239/1‑140 (MQ=255) tCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGATGATAACTACCATTTCTGGCCAGGGTATAAACCTGTTTATCACCATGGAGCAGGTCTACACGAACGATATCTGCCGAc < 1:414247/140‑1 (MQ=255) tCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCAGGGTATAAACCTGTTTATCACCATGGAGCAGGTCTACACGAACGATATCTGCCGAc < 2:586307/140‑1 (MQ=255) tCCCCGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCAGGGTATAAACCTGTTTATCACCATGGAGCAGGTCTACACGAACGATATCTGCCGAc < 2:463268/140‑1 (MQ=255) ccGGATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCAGGGTATAAACCTGTTTATCACCATGGAGCAGGTCTACACGAACGATATCTGCCGAcatc > 2:105734/1‑140 (MQ=255) ggATGATTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCAGGGTATAAACCTGTTTATCACCATGGAGCAGGTCTACACGAACGATATCTGCCGAcatcat < 1:1312271/140‑1 (MQ=255) gatgatTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCAGGGTATAAACCTGTTTATCACCATGGAGCAGGTCTACACGAACGATATCTGCCGACATCAtt > 1:352152/1‑140 (MQ=255) | ACCAGCGTACCGCCAGGAAGAGCATAACAATGATAAAGCCAATCGCCCCCGTGAGCGGCGCGGTGGTCATCAACGAATGGAAATAGTTGCCCATCGGATCCTGATAAACCAGACGCAACGACATCCCCGGATGCTTTATCAACGGAACGCTCAGTTCGCGAAACAGATCGCTGGAGCCAACTGGACGATAACTACCATTTCTGGCCAGGGTATAAACCTGTTTATCACCATGGAGCAGGTCTACACGAACGATATCTGCCGACATCATT > NC_000913/3402861‑3403129 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |