BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,993,632	A→C	intergenic (+162/‑6)	ygeH → / → ygeI	putative transcriptional regulator YgeH/protein YgeI

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,993,632	0	A	C	100.0%	384.1 / NA	104	intergenic (+162/‑6)	ygeH/ygeI	putative transcriptional regulator YgeH/protein YgeI
Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (58/46); total (58/46)

Only 100 of 105 total aligned reads displayed.

TAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAACACATCAACACCAGTGCTACTGATACAGATCAAATACAAGCATT  >  NC_000913/2993497‑2993768

tAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCtt                                                                                                                                      >  2:632539/1‑140 (MQ=255)

tAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCtt                                                                                                                                      >  2:298824/1‑140 (MQ=255)

tAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCtt                                                                                                                                      >  1:700690/1‑140 (MQ=255)

tAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCtt                                                                                                                                      <  1:408354/140‑1 (MQ=255)

        tGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTa                                                                                                                              >  1:921963/1‑140 (MQ=255)

        tGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTa                                                                                                                              >  2:884179/1‑140 (MQ=255)

        tGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTa                                                                                                                              >  2:1148487/1‑140 (MQ=255)

        tGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTa                                                                                                                              >  2:1116637/1‑140 (MQ=255)

        tGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTa                                                                                                                              >  2:10329/1‑140 (MQ=255)

        tGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTa                                                                                                                              >  1:339200/1‑140 (MQ=255)

             cTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCa                                                                                                                         >  2:743522/1‑140 (MQ=255)

               tGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAAt                                                                                                                       <  2:339200/140‑1 (MQ=255)

                gTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATc                                                                                                                      <  2:774715/140‑1 (MQ=255)

                gTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATc                                                                                                                      >  1:672760/1‑140 (MQ=255)

                gTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATc                                                                                                                      >  1:363332/1‑140 (MQ=255)

                gTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATc                                                                                                                      >  2:238183/1‑140 (MQ=255)

                 ttATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCg                                                                                                                     <  1:1116637/140‑1 (MQ=255)

                   aTTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGt                                                                                                                   <  1:238183/140‑1 (MQ=255)

                                    aaaaaTATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCa                                                                                                  <  2:1059659/140‑1 (MQ=255)

                                    aaaaaTATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCa                                                                                                  <  2:363332/140‑1 (MQ=255)

                                    aaaaaTATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCa                                                                                                  <  2:672760/140‑1 (MQ=255)

                                     aaaaTATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCaa                                                                                                 <  2:290629/140‑1 (MQ=255)

                                     aaaaTATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCaa                                                                                                 <  2:1400715/140‑1 (MQ=255)

                                     aaaaTATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCaa                                                                                                 <  1:1048406/140‑1 (MQ=255)

                                     aaaaTATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCaa                                                                                                 <  2:407450/140‑1 (MQ=255)

                                     aaaaTATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCaa                                                                                                 >  1:910219/1‑140 (MQ=255)

                                       aaTATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAg                                                                                               >  2:299163/1‑140 (MQ=255)

                                          atCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTc                                                                                            >  2:354453/1‑140 (MQ=255)

                                            cTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCaa                                                                                                 >  1:1340316/1‑133 (MQ=255)

                                            cTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCaa                                                                                                 <  2:1340316/133‑1 (MQ=255)

                                              aaGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAat                                                                                        <  1:897190/140‑1 (MQ=255)

                                                gATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCa                                                                                                  >  2:1320858/1‑128 (MQ=255)

                                                gATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCa                                                                                                  <  1:1320858/128‑1 (MQ=255)

                                                   atTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGc                                                                                   >  2:31743/1‑140 (MQ=255)

                                                    ttCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCg                                                                                  <  1:30233/140‑1 (MQ=255)

                                                     tCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGa                                                                                 >  2:244238/1‑140 (MQ=255)

                                                          ttATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCa                                                                            <  2:524476/140‑1 (MQ=255)

                                                           tATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCaa                                                                           <  1:1148487/140‑1 (MQ=255)

                                                            aTTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCaa                                                                           <  2:47660/139‑1 (MQ=255)

                                                            aTTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCaa                                                                           >  1:47660/1‑139 (MQ=255)

                                                            aTTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAAc                                                                          >  1:1290265/1‑140 (MQ=255)

                                                                   gATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCa                                                                            <  2:1398656/131‑1 (MQ=255)

                                                                   gATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCa                                                                            >  1:1398656/1‑131 (MQ=255)

                                                                   gATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGtgat                                                                   >  2:1147693/1‑140 (MQ=255)

                                                                   gATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGtgat                                                                   <  2:1290265/140‑1 (MQ=255)

                                                                       tttAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAg                                                               >  2:557857/1‑140 (MQ=255)

                                                                          aaaaTGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCg                                                            <  1:640047/140‑1 (MQ=255)

                                                                          aaaaTGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCg                                                            <  1:31743/140‑1 (MQ=255)

                                                                               gCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCa                                                       >  2:190884/1‑140 (MQ=255)

                                                                               gCTCTAGAGTTAAAAGGATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCa                                                       >  1:325437/1‑140 (MQ=255)

                                                                                ctctAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCAt                                                      >  2:408608/1‑140 (MQ=255)

                                                                                 tctAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCGGATCGTTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCCtt                                                     >  2:1235811/1‑140 (MQ=255)

                                                                                   tAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAg                                                   >  1:1262127/1‑140 (MQ=255)

                                                                                        ttAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATa                                                <  1:1200743/138‑1 (MQ=255)

                                                                                        ttAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATa                                                >  2:1200743/1‑138 (MQ=255)

                                                                                         tAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAac                                             <  1:884179/140‑1 (MQ=255)

                                                                                               tATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTACCATTAGATAAACACATCa                                       >  2:211098/1‑140 (MQ=255)

                                                                                                atgatgTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAACACATCaa                                      >  1:1062075/1‑140 (MQ=255)

                                                                                                  gatgTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAac                                             <  1:1187883/131‑1 (MQ=255)

                                                                                                  gatgTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAac                                             >  2:1187883/1‑131 (MQ=255)

                                                                                                  gatgTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAACACATCAaca                                    >  2:1079347/1‑140 (MQ=255)

                                                                                                   atgTAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAACACATCAacac                                   <  2:1262127/140‑1 (MQ=255)

                                                                                                      tAAAGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAACACATCAACACCAg                                >  2:473408/1‑140 (MQ=255)

                                                                                                       aaaGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAACACATCAACACCAGt                               <  1:354453/140‑1 (MQ=255)

                                                                                                       aaaGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAACACATCAACACCAGt                               <  1:1347872/140‑1 (MQ=255)

                                                                                                       aaaGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAACACATCAACACCAGt                               <  1:190884/140‑1 (MQ=255)

                                                                                                         aGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAACACATCAACACCAGt                               <  1:1336294/138‑1 (MQ=255)

                                                                                                         aGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAACACATCAACACCAGt                               >  2:1336294/1‑138 (MQ=255)

                                                                                                         aGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAACACATCAACACCAGTGc                             >  2:1132170/1‑140 (MQ=255)

                                                                                                         aGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAACACATCAACACCAGTGc                             >  1:864717/1‑140 (MQ=255)

                                                                                                         aGACCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAACACATCAACACCAGTGc                             <  1:244238/140‑1 (MQ=255)

                                                                                                           aCCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAACACATCAACACCAGt                               <  1:1377228/136‑1 (MQ=255)

                                                                                                           aCCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAACACATCAACACCAGt                               >  2:1377228/1‑136 (MQ=255)

                                                                                                           aCCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAACACATCAACACCAGTGCTa                           <  1:743522/140‑1 (MQ=255)

                                                                                                           aCCATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAACACATCAACACCAGTGCTa                           <  1:473408/140‑1 (MQ=255)

                                                                                                             cATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAACACATCAACACCAGTGCTACt                         >  2:506354/1‑140 (MQ=255)

                                                                                                             cATTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAACACATCAACACCAGTGCTACt                         >  1:880112/1‑140 (MQ=255)

                                                                                                              aTTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAACACATCAACACCAGTGCTACTg                        >  2:771235/1‑140 (MQ=255)

                                                                                                              aTTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAACACATCAACACCAGTGCTACTg                        >  2:513766/1‑140 (MQ=255)

                                                                                                              aTTGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAACACATCAACACCAGTGCTACTg                        >  1:1109907/1‑140 (MQ=255)

                                                                                                               ttGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAACACATCAACACCAGt                               <  1:1156059/132‑1 (MQ=255)

                                                                                                               ttGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAACACATCAACACCAGTGCTACTGa                       >  1:230046/1‑140 (MQ=255)

                                                                                                                tGGCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGGCGTATCATTAGATAAACACATCAACAACAGTGCTACTGAt                      <  2:134036/140‑1 (MQ=255)

                                                                                                                 ggCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAACACATCAACACCAGTGCTACTGATa                     <  1:408608/140‑1 (MQ=255)

                                                                                                                 ggCCTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAACACATCAACACCAGTGCTACTGATa                     <  2:11183/140‑1 (MQ=255)

                                                                                                                    cTGGACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAACACATCAACACCAGTGCTACTGATACAg                  >  1:744851/1‑140 (MQ=255)

                                                                                                                       gACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAACACATCAACACCAGTGCTACTGATACAGATc               >  2:882811/1‑140 (MQ=255)

                                                                                                                       gACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAACACATCAACACCAGTGCTACTGATACAGATc               >  1:1347037/1‑140 (MQ=255)

                                                                                                                       gACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAACACATCAACACCAGTGCTACTGATACAGATc               <  1:506354/140‑1 (MQ=255)

                                                                                                                       gACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAACACATCAACACCAGTGCTACTGATACAGATc               >  1:239332/1‑140 (MQ=255)

                                                                                                                       gACAATTAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAACACATCAACACCAGTGCTACTGATACAGATc               >  1:973955/1‑140 (MQ=255)

                                                                                                                            ttAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAACACATCAACACCAGTGCTACTGAt                      >  2:521660/1‑128 (MQ=255)

                                                                                                                            ttAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAACACATCAACACCAGTGCTACTGAt                      <  1:521660/128‑1 (MQ=255)

                                                                                                                            ttAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAACACATCAACACCAGTGCTACTGATACAGATCAAATa          >  2:813354/1‑140 (MQ=255)

                                                                                                                            tcaaaaaaGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAACACATCAACACCAGTGCTACTGATACAGATCAAATa          >  1:1218441/3‑140 (MQ=255)

                                                                                                                             tAAAAAAGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAACACATCAACACCAGTGCTa                           <  1:32649/122‑1 (MQ=255)

                                                                                                                              aaaaaaGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAACACATCAACACCAGTGCTACTGATACAGATCAAATACa        <  1:298824/140‑1 (MQ=255)

                                                                                                                              aaaaaaGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAACACATCAACACCAGTGCTACTGATACAGATCAAATACa        <  1:299163/140‑1 (MQ=255)

                                                                                                                               aaaaaGGGCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAACACATCAACACCAGTGCTACTGATACAGATCAAATACaa       <  1:1079347/140‑1 (MQ=255)

                                                                                                                                    gggCGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAACACATCAACACCAGTGCTACTGATACAGATCAAATACAAGCAtt  >  1:1369939/1‑140 (MQ=255)

TAGATGTATGCAACTTGTTATTTAAACAACAGAGATAAAAATATCTAAGATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAACACATCAACACCAGTGCTACTGATACAGATCAAATACAAGCATT  >  NC_000913/2993497‑2993768

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`