Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,765,836	G→T	C950* (TGC→TGA)	ydiJ ←	putative FAD‑linked oxidoreductase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,765,836	0	G	T	100.0%	265.9 / NA	75	C950* (TGC→TGA)	ydiJ	putative FAD‑linked oxidoreductase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (36/39);  total (36/39)

CGGCAGGAATATCCGGTCGCCAGACAGCGGTTACGCGGCAGTCGCTGCATAGCCTGATGCCAGGATAACTCATAGATCCCGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCAGCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCGGTAACTTCGGTACAGTGACCAAAGAAATACCATGATTCACCGCTGACTGTAGC  >  NC_000913/1765702‑1765970                                                                                                                                       |                                                                                                                                       cGGCAGGAATATCCGGTCGCCAGACAGCGGTTACGCGGCAGTCGCTGCATAGCCTGATGCCAGGATAACTCATAGATCCCGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAAcc                                                                                                                                   <  1:1190632/140‑1 (MQ=255)  ggCAGGAATATCCGGTCGCCAGACAGCGGTTACGCGGCAGTCGCTGCATAGCCTGATGCCAGGATAACTCATAGATCCCGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAAccc                                                                                                                                  >  1:1291358/1‑140 (MQ=255)       gAATATCCGGTCGCCAGACAGCGGTTACGCGGCAGTCGCTGCATAGCCTGATGCCAGGATAACTCATAGATCCCGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAAcc                                                                                                                                   <  2:814990/134‑1 (MQ=255)       gAATATCCGGTCGCCAGACAGCGGTTACGCGGCAGTCGCTGCATAGCCTGATGCCAGGATAACTCATAGATCCCGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAAcc                                                                                                                                   >  1:814990/1‑134 (MQ=255)       gAATATCCGGTCGCCAGACAGCGGTTACGCGGCAGTCGCTGCATAGCCTGATGCCAGGATAACTCATAGATCCCGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCt                                                                                                                             <  1:630653/140‑1 (MQ=255)        aaTATCCGGTCGCCAGACAGCGGTTACGCGGCAGTCGCTGCATAGCCTGATGCCAGGATAACTCATAGATCCCGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTg                                                                                                                            <  2:900832/140‑1 (MQ=255)        aaTATCCGGTCGCCAGACAGCGGTTACGCGGCAGTCGCTGCATAGCCTGATGCCAGGATAACTCATAGATCCCGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTg                                                                                                                            <  2:365292/140‑1 (MQ=255)           atCCGGTCGCCAGACAGCGGTTACGCGGCAGTCGCTGCATAGCCTGATGCCAGGATAACTCATAGATCCCGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACa                                                                                                                         <  2:353837/140‑1 (MQ=255)            tCCGGTCGCCAGACAGCGGTTACGCGGCAGTCGCTGCATAGCCTGATGCCAGGATAACTCATAGATCCCGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTg                                                                                                                            >  2:95985/1‑136 (MQ=255)            tCCGGTCGCCAGACAGCGGTTACGCGGCAGTCGCTGCATAGCCTGATGCCAGGATAACTCATAGATCCCGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTg                                                                                                                            <  1:95985/136‑1 (MQ=255)               ggTCGCCAGACAGCGGTTACGCGGCAGTCGCTGCATAGCCTGATGCCAGGATAACTCATAGATCCCGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACAtttt                                                                                                                     >  1:92108/1‑140 (MQ=255)                gTCGCCAGACAGCGGTTACGCGGCAGTCGCTGCATAGCCTGATGCCAGGATAACTCATAGATCCCGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGc                                                                                                                              >  2:313671/1‑130 (MQ=255)                gTCGCCAGACAGCGGTTACGCGGCAGTCGCTGCATAGCCTGATGCCAGGATAACTCATAGATCCCGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGc                                                                                                                              <  1:313671/130‑1 (MQ=255)                 tCGCCAGACAGCGGTTACGCGGCAGTCGCTGCATAGCCTGATGCCAGGATAACTCATAGATCCCGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTcc                                                                                                                   >  2:936891/1‑140 (MQ=255)                 tCGCCAGACAGCGGTTACGCGGCAGTCGCTGCATAGCCTGATGCCAGGATAACTCATAGATCCCGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTcc                                                                                                                   >  1:1152273/1‑140 (MQ=255)                               ttACGCGGCAGTCGCTGCATAGCCTGATGCCAGGATAACTCATAGATCCCGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGttt                                                                                                              <  1:879742/131‑1 (MQ=255)                               ttACGCGGCAGTCGCTGCATAGCCTGATGCCAGGATAACTCATAGATCCCGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGttt                                                                                                              >  2:879742/1‑131 (MQ=255)                               ttACGCGGCAGTCGCTGCATAGCCTGATGCCAGGATAACTCATAGATCCCGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCaaa                                                                                                     >  1:703086/1‑140 (MQ=255)                                tACGCGGCAGTCGCTGCATAGCCTGATGCCAGGATAACTCATAGATCCCGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCaaaa                                                                                                    <  1:936891/140‑1 (MQ=255)                                       cAGTCGCTGCATAGCCTGATGCCAGGATAACTCATAGATCCCGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCaa                                                                                             >  1:596174/1‑140 (MQ=255)                                             cTGCATAGCCTGATGCCAGGATAACTCATAGATCCCGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATcg                                                                                       <  1:1133733/140‑1 (MQ=255)                                                    gCCTGATGCCAGGATAACTCATAGATCCCGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCa                                                                                >  2:1060064/1‑140 (MQ=255)                                                       tGATGCCAGGATAACTCATAGATCCCGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCa                                                                                <  1:425570/137‑1 (MQ=255)                                                       tGATGCCAGGATAACTCATAGATCCCGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCa                                                                                >  2:425570/1‑137 (MQ=255)                                                          tGCCAGGATAACTCATAGATCCCGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGc                                                                          >  1:234720/1‑140 (MQ=255)                                                          tGCCAGGATAACTCATAGATCCCGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGc                                                                          >  2:1156720/1‑140 (MQ=255)                                                               ggATAACTCATAGATCCCGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGgcg                                                                     >  1:1358959/1‑140 (MQ=255)                                                                 aTAACTCATAGATCCCGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCa                                                                   <  2:703086/140‑1 (MQ=255)                                                                 aTAACTCATAGATCCCGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCa                                                                   <  2:1065544/140‑1 (MQ=255)                                                                  tAACTCATAGATCCCGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCAc                                                                  <  1:804268/140‑1 (MQ=255)                                                                       aaaggATCCCGAACGAATTTTCATGGGTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAGCCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGc                                                             <  2:916870/136‑1 (MQ=255)                                                                         tAGATCCCGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCaa                                                           <  2:1291358/140‑1 (MQ=255)                                                                             tCCCGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCg                                                       <  2:1358959/140‑1 (MQ=255)                                                                              cccGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCgg                                                      >  1:1211163/1‑140 (MQ=255)                                                                              cccGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCgg                                                      >  1:1382176/1‑140 (MQ=255)                                                                               ccGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCGGt                                                     >  2:775607/1‑140 (MQ=255)                                                                               ccGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCGGt                                                     >  2:154866/1‑140 (MQ=255)                                                                               ccGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCGGt                                                     <  2:561137/140‑1 (MQ=255)                                                                               ccGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCGGt                                                     <  1:154866/140‑1 (MQ=255)                                                                               ccGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCGGt                                                     >  2:580420/1‑140 (MQ=255)                                                                               ccGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCGGt                                                     <  2:887236/140‑1 (MQ=255)                                                                               ccGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCGGt                                                     >  1:561137/1‑140 (MQ=255)                                                                                cGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCGGt                                                     >  1:313583/1‑139 (MQ=255)                                                                                cGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCGGt                                                     <  2:313583/139‑1 (MQ=255)                                                                                cGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCGGTa                                                    >  2:447941/1‑140 (MQ=255)                                                                                cGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCGGTa                                                    >  2:766821/1‑140 (MQ=255)                                                                                cGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCGGTa                                                    >  2:836398/1‑140 (MQ=255)                                                                                 gAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCGGTaa                                                   <  2:1152273/140‑1 (MQ=255)                                                                                  aGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCGGTAAc                                                  >  1:1274374/1‑140 (MQ=255)                                                                                  aGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCGGTAAc                                                  >  1:478049/1‑140 (MQ=255)                                                                                  aGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCGGTAAc                                                  >  2:357365/1‑140 (MQ=255)                                                                                     gAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATAAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCGGTAACTTc                                               <  2:580659/140‑1 (MQ=255)                                                                                      aaTTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCGGTAACTTCg                                              >  2:697995/1‑140 (MQ=255)                                                                                      aaTTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCGGTAACTTCg                                              >  2:1004834/1‑140 (MQ=255)                                                                                       aTTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCGGTaa                                                   <  1:518539/134‑1 (MQ=255)                                                                                       aTTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCGGTaa                                                   >  2:518539/1‑134 (MQ=255)                                                                                           tCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCGGTAACTTCGGTACa                                         <  2:1211163/140‑1 (MQ=255)                                                                                                gTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCGGTAACTTCGGTACAGTGAc                                    <  1:836398/140‑1 (MQ=255)                                                                                                gTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCGGTAACTTCGGTACAGTGAc                                    <  2:234720/140‑1 (MQ=255)                                                                                                   tttCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCGGTAACTTCGGTACAGTGACCa                                  >  2:4724/1‑139 (MQ=255)                                                                                                   tttCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCGGTAACTTCGGTACAGTGACCa                                  <  1:4724/139‑1 (MQ=255)                                                                                                      cGCTTAATGTCCGTAAGTCCCTCCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTCCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCGGTAACTTCGGTACAGTGACCAAAGa                              <  2:380365/140‑1 (MQ=255)                                                                                                       gCTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCGGTAACTTCGGTACAGTGAACAAAGaa                             <  1:1004834/140‑1 (MQ=255)                                                                                                        cTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCGGTAACTTCGGTACAGTGACCAAAGaaa                            <  2:596174/140‑1 (MQ=255)                                                                                                        cTTCATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCGGTAACTTCGGTACAGTGACCAAAGaaa                            <  1:1170489/140‑1 (MQ=255)                                                                                                           cATGTCCGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCGGTAACTTCGGTACAGTGACCAAAGAAATAc                         >  2:552541/1‑140 (MQ=255)                                                                                                                 cGTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCGGTAACTTCGGTACAGTGACCAAAGAAATACCATGAt                   <  2:1295264/140‑1 (MQ=255)                                                                                                                  gTAAGTCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCGGTAACTTCGGTACAGTGACCAAAGAAATACCATGAtt                  <  1:775607/140‑1 (MQ=255)                                                                                                                       tCCCTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCGGTAACTTCGGTACAGTGACCAAAGAAATACCATGATTCACCg             <  1:552541/140‑1 (MQ=255)                                                                                                                        cccTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCGGTAACTTCGGTACAGTGACCAAAGAAATACCATGATTCACCGc            <  1:697995/140‑1 (MQ=255)                                                                                                                        cccTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCGGTAACTTCGGTACAGTGACCAAAGAAATACCATGATTCACCGc            <  1:580420/140‑1 (MQ=255)                                                                                                                          cTGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCGGTAACTTCGGTACAGTGACCAAAGAAATACCATGATTCACCGCTg          <  2:1382176/140‑1 (MQ=255)                                                                                                                           tGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCGGTAACTTCGGTACAGTGACCAAAGAAATACCATGAtt                  <  1:354449/131‑1 (MQ=255)                                                                                                                           tGCCATGCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCGGTAACTTCGGTACAGTGACCAAAGAAATACCATGAtt                  >  2:354449/1‑131 (MQ=255)                                                                                                                                 gCCGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCGGTAACTTCGGTACAGTGACCAAAGAAATACCATGATTCACCGCTGACTGTAg   >  2:973579/1‑140 (MQ=255)                                                                                                                                  ccGCATCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCGGTAACTTCGGTACAGTGACCAAAGAAATACCATGATTCACCGCTGACTGTAGc  >  1:295672/1‑140 (MQ=255)                                                                                                                                       |                                                                                                                                       CGGCAGGAATATCCGGTCGCCAGACAGCGGTTACGCGGCAGTCGCTGCATAGCCTGATGCCAGGATAACTCATAGATCCCGAGCGAATTTTCATGGTTTTTCGCTTCATGTCCGTAAGTCCCTGCCATGCCGCAGCAACCCACGCTGACATTTTCCAGTTTCGCGCCAAAACGGGCAAATATCGCGGCCCATTGTGCTGGCGCACCCGGCAAGGCGGTAACTTCGGTACAGTGACCAAAGAAATACCATGATTCACCGCTGACTGTAGC  >  NC_000913/1765702‑1765970

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑