Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,068,1730TG24.0% 230.4 / 34.2 104G31G (GGT→GGG) ymdFconserved protein YmdF
Reads supporting (aligned to +/- strand):  ref base T (31/48);  new base G (25/0);  total (56/48)
Fisher's exact test for biased strand distribution p-value = 9.99e-09
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 114 total aligned reads displayed.

CGTTAATTCTATGCAATATGATGTCTATACCCAGACGGAGGTCAGTAATGGCAAACCATCGAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATTTTTGTCTGTAGCTCGTCAAAAAGCCATCACC  >  NC_000913/1068034‑1068311
                                                                                                                                           |                                                                                                                                           
cgTTAATTCTATGCAATATGATGTCTATACCCAGACGGAGGTCAGTAATGGCAAACCATCGAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGt                                                                                                                                             <  1:846262/140‑1 (MQ=255)
        cTATGCAATATGATGTCTATACCCAGACGGAGGTCAGTAATGGCAAACCATCGAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCaa                                                                                                                                     <  1:1620388/140‑1 (MQ=255)
          aTGCAATATGATGTCTATACCCAGACGGAGGTCAGTAATGGCAAACCATCGAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGa                                                                                                                                   <  2:898013/140‑1 (MQ=255)
                tatGATGTCTATACCCAGACGGAGGTCAGTAATGGCAAACCATCGAGGCGGTTTCGGGAATTTTTCCGAAGACCGCGAAAAAGGATCACAAGCAGGTAAAAAAAGCGGAAAGCACAGCGGGGGGAAATTCAAGAAttgcc                                                                                                                             >  2:1037095/1‑136 (MQ=255)
                tatGATGTCTATACCCAGACGGAGGTCAGTAATGGCAAACCATCGAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGAcc                                                                                                                             >  1:1273119/1‑140 (MQ=255)
                   gatgTCTATACCCAGACGGAGGTCAGTAATGGCAAACCATCGAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGGAATTTCAAGAATGACCCGc                                                                                                                          >  1:1047083/1‑140 (MQ=255)
                    atgTCTATACCCAGACGGAGGTCAGTAATGGCAAACCATCGAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCa                                                                                                                         <  2:1433785/140‑1 (MQ=255)
                       tCTATACCCAGACGGAGGTCAGTAATGGCAAACCATCGAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAgcg                                                                                                                      <  2:1047083/140‑1 (MQ=255)
                       tCTATACCCAGACGGAGGTCAGTAATGGCAAACCATCGAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAgcg                                                                                                                      <  1:1396951/140‑1 (MQ=255)
                        cTATACCCAGACGGAGGTCAGTAATGGCAAACCATCGAGGCGGTTCCGGCAATTTTTCAGAAGACCGCGAAAGAGCATCAAAAGCAGGGAAAAAAAGGGGACAGCACAGCGGGGGGAATTTTAAGAATGACCCCCAgcgc                                                                                                                     >  2:1557780/1‑140 (MQ=255)
                        cTATACCCAGACGGAGGTCAGTAATGGCAAACCATCGAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAgcgc                                                                                                                     <  1:1645711/140‑1 (MQ=255)
                          ataCCCAGACGGAGGTCAGTAATGGCAAACCATCGAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCg                                                                                                                           <  2:1934548/132‑1 (MQ=255)
                          ataCCCAGACGGAGGTCAGTAATGGCAAACCATCGAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGGAATTTCAAGAATGACCCg                                                                                                                           >  1:1934548/1‑132 (MQ=255)
                            aCCCAGACGGAGGTCAGTAATGGCAAACCATCGAGGCGGTTCCGGCGATTTTGCAGGAGGCCGCGAAAGAGCATTAGAAGCAGGTAAAAAAGGGGGACAGGACAGCGGGGGGAATTTCAAGAATGACCCGCAGCGCGCAt                                                                                                                 >  2:1645711/1‑140 (MQ=255)
                                aGACGGAGGTCAGTAATGGCAAACCATCGAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGa                                                                                                             >  2:683733/1‑140 (MQ=255)
                                aGACGGAGGTCAGTAATGGCAAACCATCGAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGGAAAAAAGGTGGACAGCACAGCGGGGGGAATTTCAAGAATGACCCGCAGCGCGCATCTGa                                                                                                             >  2:676485/1‑140 (MQ=255)
                                 gACGGAGGTCAGTAATGGCAAACCATCGAGGCGGTTCCGGCAATTTTTCAGAAGAACGCGAAAGAGCATCAGAAGCAGGGAAAAAAGGAGGACAGCACAGCGGGGGGAATTTTAAGAATGACCCGCAGCGCGCATCTGaa                                                                                                            >  2:902474/1‑140 (MQ=255)
                                 gACGGAGGTCAGTAATGGCAAACCATCGAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGaa                                                                                                            >  1:373914/1‑140 (MQ=255)
                                 gACGGAGGTCAGTAATGGCAAACCATCGAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGaa                                                                                                            <  1:152014/140‑1 (MQ=255)
                                 gACGGAGGTCAGTAATGGCAAACCATCGAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGGAATTTCAAGAATGACCCGCAGCGCGCATCTGaa                                                                                                            >  2:1173820/1‑140 (MQ=255)
                                 gACGGAGGTCAGTAATGGCAAACCATCGAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGGAATTTCAAGAATGACCCGCAGCGCGCATCTGaa                                                                                                            >  1:104289/1‑140 (MQ=255)
                                 gACGGAGGTCAGTAATGGCAAACCATCGAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGGAATTTCAAGAATGACCCGCAGCGCGCATCTGaa                                                                                                            >  2:1947473/1‑140 (MQ=255)
                                 gACGGAGGTCAGTAATGGCAAACCATCGAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGGAATTTCAAGAATGACCCGCAGCGCGCATCTGaa                                                                                                            >  1:1608226/1‑140 (MQ=255)
                                 gACGGAGGTCAGTAATGGCAAACCATCGAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAAGTGGACAGCACAGCGGGGGGAATTTCAAAAAAGACCCGCAGCGCCCATCTGaa                                                                                                            >  1:600507/1‑140 (MQ=255)
                                 gACGGAGGTCAGTAATGGCAAACCATCGAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGGAAAAAAGGTGGACAGCACAGCGGGGGGAATTTCAAGAATGACCCGCAGCGCGCATCTGaa                                                                                                            >  1:325343/1‑140 (MQ=255)
                                 gACGGAGGTCAGTAATGGCAAACCATCGAGGCGGTTCCGGC‑ATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGGAAAAAAGGTGGACAGCACAGCGGGGGGAATTTCAAGAATGACCCGCAGCGCGCATCTGAAg                                                                                                           >  2:242333/1‑140 (MQ=255)
                                  aCGGAGGTCAGTAATGGCAAACCATCGAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAg                                                                                                           <  2:737632/140‑1 (MQ=255)
                                  aCGGAGGTCAGTAATGGCAAACCATCGAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAg                                                                                                           <  1:1173820/140‑1 (MQ=255)
                                  aCGGAGGTCAGTAATGGCAAACCATCGAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAg                                                                                                           <  1:1232728/140‑1 (MQ=255)
                                  aCGGAGGTCAGTAATGGCAAACCATCGAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAg                                                                                                           >  1:1832631/1‑140 (MQ=255)
                                  aCGGAGGTCAGTAATGGCAAACCATCGAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGGAATTTCAAGAATGACCCGCAGCGCGCATCTGAAg                                                                                                           >  1:737632/1‑140 (MQ=255)
                                  aCGGAGGTCAGTAATGGCAAACCATCGAGGCGGTTCCGGCAATTTTGCAGAAAACCGCGAAAAAGCAACCGTAATAGGGAAAAAAAGTGGAAAGCACAGCGGGGGTAATTTCAAGAATAACCCGCCGCGCGCATCTggaa                                                                                                           >  2:586114/1‑137 (MQ=255)
                                   cGGAGGTCAGTAATGGCAAACCATCGAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGc                                                                                                          >  2:592664/1‑140 (MQ=255)
                                    ggAGGTCAGTAATGGCAAACCATCGAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCa                                                                                                         <  1:592664/140‑1 (MQ=255)
                                     gAGGTCAGTAATGGCAAACCATCGAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAgcg                                                                                                                      <  2:1191195/126‑1 (MQ=255)
                                           aGTAATGGCAAACCATCGAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAg                                                                                                           <  2:1173852/131‑1 (MQ=255)
                                           aGTAATGGCAAACCATCGAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGGAATTTCAAGAATGACCCGCAGCGCGCATCTGAAg                                                                                                           >  1:1173852/1‑131 (MQ=255)
                                              aaTGGCAAACCATCGAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAg                                                                                              <  2:1146518/140‑1 (MQ=255)
                                                tGGCAAACCATCGAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGGAAAAAAGGTGGACAGCACAGCGGGGGGAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAggg                                                                                            >  1:756238/1‑139 (MQ=255)
                                                  gCAAACCATCGAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGGAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAggtgg                                                                                          >  2:787317/1‑140 (MQ=255)
                                                  gCAAACCATCGAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGGAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAggtgg                                                                                          >  2:248179/1‑140 (MQ=255)
                                                  gCAAACCATCGAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGGAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGG‑AAAAAAggtgg                                                                                          >  1:1282449/1‑140 (MQ=255)
                                                  gCAAACCATCGAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGGGGACAGCACAGCGGGGGGAATTTCAAAAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAggggg                                                                                          >  1:1029919/1‑140 (MQ=255)
                                                  gCAAACCATCGAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGGAAAAAAGGGGGACAGCACAGCGGGGGGAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAggtgg                                                                                          >  2:1773290/1‑140 (MQ=255)
                                                     aaCCATCGAGGCGGTTCCTGCAATTTTTCCGAAAACCGCGAAAGAGCATCAGAAGCAGGGAAAAAAGGGGGGCAGGAAAGCGGGGGGAATTTCCAGGATGGCCCGCCGCGCCCATCTGGAGCAGGT‑AAAAAAGGTGGGaa                                                                                       >  2:1634577/1‑140 (MQ=255)
                                                     aaCCATCGAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCa                                                                                                         <  1:32113/123‑1 (MQ=255)
                                                     aaCCATCGAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCa                                                                                                         >  2:32113/1‑123 (MQ=255)
                                                       ccATCGAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGGAAAAAAGGGGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGGGGTAaga                                                                                     >  2:1981945/1‑140 (MQ=255)
                                                           cGAGGCGGTTTCGGCAATTTTGCAGAAGACCGCGAAAAAGCATCAGAAGCAGGGAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAAAGACCCGCCGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAg                                                                                 >  1:810813/1‑140 (MQ=255)
                                                            gAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAg                                                                                              <  2:404291/126‑1 (MQ=255)
                                                            gAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGt                                                                                <  1:1021424/140‑1 (MQ=255)
                                                            gAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGt                                                                                <  2:1433549/140‑1 (MQ=255)
                                                            gAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGt                                                                                >  1:1587296/1‑140 (MQ=255)
                                                            gAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGGAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAg                                                                                              >  1:404291/1‑126 (MQ=255)
                                                                  gTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGGAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGc                                                                          >  2:1809867/1‑140 (MQ=255)
                                                                   ttCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGCa                                                                         <  1:1809867/140‑1 (MQ=255)
                                                                   ttCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGCa                                                                         <  2:104289/140‑1 (MQ=255)
                                                                    tCCCGCAAGTTTTCCGAAGACCGCGAAAGAGCAACAAAAGCAAGGAAAAAAAGGGGACAGCACAGCGGGGGGAATTTCAAGAAAGACCCGCAGCGGGCATCTGAAGAAGGG‑AAAAAAGGGGGTAAGAACAAGCACCGCaa                                                                        >  2:1838716/1‑140 (MQ=255)
                                                                        gCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAg                                                                     <  2:1766069/140‑1 (MQ=255)
                                                                        gCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGc                                                                    <  2:1273119/140‑1 (MQ=255)
                                                                        gCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGc                                                                    <  1:832731/140‑1 (MQ=255)
                                                                        gCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGc                                                                    <  2:1533016/140‑1 (MQ=255)
                                                                            ttttGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACa                                                                <  1:248179/140‑1 (MQ=255)
                                                                            ttttGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACa                                                                <  1:1947473/140‑1 (MQ=255)
                                                                             tttGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACaa                                                               <  1:683733/140‑1 (MQ=255)
                                                                                  agaagaCCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGc                                                          <  2:1587296/140‑1 (MQ=255)
                                                                                      gaCCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCggg                                                      <  2:1739475/140‑1 (MQ=255)
                                                                                      gaCCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCggg                                                      <  2:1832631/140‑1 (MQ=255)
                                                                                      gaCCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCggg                                                      <  1:1838716/140‑1 (MQ=255)
                                                                                      gaCCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCggg                                                      <  2:1355839/140‑1 (MQ=255)
                                                                                      gaCCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCggg                                                      <  2:1282449/140‑1 (MQ=255)
                                                                                         cgcgAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCggg                                                      >  1:881843/1‑137 (MQ=255)
                                                                                         cgcgAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCggg                                                      <  2:881843/137‑1 (MQ=255)
                                                                                         cgcgAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTa                                                   >  2:1163963/1‑140 (MQ=255)
                                                                                                 agCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAg                                                           <  2:1801016/124‑1 (MQ=255)
                                                                                                 agCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAg                                                           >  1:1801016/1‑124 (MQ=255)
                                                                                                   cATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCggg                                                      <  1:99477/127‑1 (MQ=255)
                                                                                                       aGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATg                                     <  2:600507/140‑1 (MQ=255)
                                                                                                         aaGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCa                                   <  2:1029919/140‑1 (MQ=255)
                                                                                                          aGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCAt                                  >  1:291976/1‑140 (MQ=255)
                                                                                                          aGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCAt                                  >  1:1667280/1‑140 (MQ=255)
                                                                                                            cAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCAttt                                <  1:1432868/140‑1 (MQ=255)
                                                                                                            cAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCAttt                                >  2:1108851/1‑140 (MQ=255)
                                                                                                             agggaaaaaaGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCAtttt                               >  2:1698249/5‑140 (MQ=255)
                                                                                                              ggTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCAttttt                              >  2:1875681/1‑140 (MQ=255)
                                                                                                              ggTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCAttttt                              >  2:1265260/1‑140 (MQ=255)
                                                                                                                   aaaaGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATTTTTGTCTg                         <  1:1634577/140‑1 (MQ=255)
                                                                                                                   aaaaGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATTTTTGTCTg                         >  2:670329/1‑140 (MQ=255)
                                                                                                                         tGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATTTTTGTCTGTAGCTc                   >  2:410196/1‑140 (MQ=255)
                                                                                                                         tGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATTTTTGTCTGTAGCTc                   >  1:1252327/1‑140 (MQ=255)
                                                                                                                         tGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATTTTTGTCTGTAGCTc                   >  2:79039/1‑140 (MQ=255)
                                                                                                                           gACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATTTTTGTCTGTAGCTCGt                 >  1:575230/1‑140 (MQ=255)
                                                                                                                           gACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATTTTTGTCTGTAGCTCGt                 >  1:1047932/1‑140 (MQ=255)
                                                                                                                                     cGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATTTTTGTCTGTAGCTCGTCAAAAAGCCa       >  2:35891/1‑140 (MQ=255)
                                                                                                                                     cGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATTTTTGTCTGTAGCTCGTCAAAAAGCCa       >  1:1861387/1‑140 (MQ=255)
                                                                                                                                       ggggTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATTTTTGTCTGTAGCTCGTCAAAAAGCCATc     >  2:1359669/1‑140 (MQ=255)
                                                                                                                                          gTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATTTTTGTCTGTAGCTCGTCaaa             >  1:1257875/1‑129 (MQ=255)
                                                                                                                                          gTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATTTTTGTCTGTAGCTCGTCAAAAAGCCATCAcc  >  2:1125836/1‑140 (MQ=255)
                                                                                                                                           tAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATTTTTGTCTGTAGCTCGTCaa              >  2:1091426/1‑127 (MQ=255)
                                                                                                                                           tAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATTTTTGTCTGTAGCTCGTCaa              <  1:1091426/127‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                           
CGTTAATTCTATGCAATATGATGTCTATACCCAGACGGAGGTCAGTAATGGCAAACCATCGAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGT‑AAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATTTTTGTCTGTAGCTCGTCAAAAAGCCATCACC  >  NC_000913/1068034‑1068311

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑