BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,573,632	C→A	intergenic (‑130/+143)	glgB ← / ← asd	1,4‑alpha‑glucan branching enzyme/aspartate‑semialdehyde dehydrogenase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,573,632	0	C	A	100.0%	432.0 / NA	119	intergenic (‑130/+143)	glgB/asd	1,4‑alpha‑glucan branching enzyme/aspartate‑semialdehyde dehydrogenase
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (49/70); total (49/70)

Only 100 of 119 total aligned reads displayed.

ACATGCTTGTCTTCCTGTTTTATTGTGTCACCCCATCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATCATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAA  >  NC_000913/3573499‑3573764

aCATGCTTGTCTTCCTGTTTTATTGTGTCACCCCATCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGaa                                                                                                                                <  2:1052854/140‑1 (MQ=255)

  aTGCTTGTCTTCCTGTTTTATTGTGTCACCCCATCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATa                                                                                                                              <  2:973025/140‑1 (MQ=255)

  aTGCTTGTCTTCCTGTTTTATTGTGTCACCCCATCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATa                                                                                                                              <  2:1924714/140‑1 (MQ=255)

  aTGCTTGTCTTCCTGTTTTATTGTGTCACCCCATCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATa                                                                                                                              <  1:817471/140‑1 (MQ=255)

    gCTTGTCTTCCTGTTTTATTGTGTCACCCCATCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACt                                                                                                                            >  1:411568/1‑140 (MQ=255)

     cTTGTCTTCCTGTTTTATTGTGTCACCCCATCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTc                                                                                                                           >  1:516661/1‑140 (MQ=255)

     cTTGTCTTCCTGTTTTATTGTGTCACCCCATCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTc                                                                                                                           >  1:2047412/1‑140 (MQ=255)

     cTTGTCTTCCTGTTTTATTGTGTCACCCCATCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTCTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTc                                                                                                                           <  2:1953552/140‑1 (MQ=255)

        gTCTTCCTGTTTTATTGTGTCACCCCATCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATg                                                                                                                        >  2:473535/1‑140 (MQ=255)

         tCTTCCTGTTTTATTGTGTCACCCCATCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGt                                                                                                                       >  2:875987/1‑140 (MQ=255)

             ccTGTTTTATTGTGTCACCCCATCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTc                                                                                                                   >  2:1727609/1‑140 (MQ=255)

              cTGTTTTATTGTGTCACCCCATCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCa                                                                                                                  >  1:1742919/1‑140 (MQ=255)

                gTTTTATTGTGTCACCCCATCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGc                                                                                                                <  1:1149614/140‑1 (MQ=255)

                gTTTTATTGTGTCACCCCATCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGc                                                                                                                <  1:875987/140‑1 (MQ=255)

                gTTTTATTGTGTCACCCCATCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGc                                                                                                                <  2:464793/140‑1 (MQ=255)

                gTTTTATTGTGTCACCCCATCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGc                                                                                                                <  2:688971/140‑1 (MQ=255)

                gTTTTATTGTGTCACCCCATCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGc                                                                                                                <  1:2057974/140‑1 (MQ=255)

                gTTTTATTGTGTCACCCCATCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGc                                                                                                                <  1:1652678/140‑1 (MQ=255)

                gTTTTATTGTGTCACCCCATCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGc                                                                                                                <  2:897576/140‑1 (MQ=255)

                gTTTTATTGTGTCACCCCATCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGc                                                                                                                <  2:811660/140‑1 (MQ=255)

                 ttttATTGTGTCACCCCATCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGcc                                                                                                               <  2:155766/140‑1 (MQ=255)

                 ttttATTGTGTCACCCCATCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGcc                                                                                                               <  2:1374384/140‑1 (MQ=255)

                   ttATTGTGTCACCCCATCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGaaaa                                                                                                                              <  2:1651173/123‑3 (MQ=255)

                   ttATTGTGTCACCCCATCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATa                                                                                                                              >  1:1651173/1‑123 (MQ=255)

                   ttATTGTGTCACCCCATCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATa                                                                                                                              >  1:768378/1‑123 (MQ=255)

                   ttATTGTGTCACCCCATCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGc                                                                                                                >  2:683766/1‑137 (MQ=255)

                   ttATTGTGTCACCCCATCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGc                                                                                                                <  1:683766/137‑1 (MQ=255)

                     aTTGTGTCACCCCATCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCAccc                                                                                                           <  1:690276/140‑1 (MQ=255)

                       tgtgTCACCCCATCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCtt                                                                                                         <  2:2047412/140‑1 (MQ=255)

                       tgtgTCACCCCATCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCtt                                                                                                         <  2:1880357/140‑1 (MQ=255)

                       agtgtCCCCCCAACCAAATGGGTTTTTGGCTTTCTGGTTG‑GGCAATTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCtt                                                                                                         <  1:1578596/139‑1 (MQ=255)

                         tgtCACCCCATCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTaa                                                                                                       >  2:393747/1‑140 (MQ=255)

                           tCACCCCATCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGcc                                                                                                               <  1:1798396/130‑1 (MQ=255)

                           tCACCCCATCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGcc                                                                                                               >  2:1798396/1‑130 (MQ=255)

                           tCACCCCATCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGc                                                                                                                <  1:1978112/129‑1 (MQ=255)

                           tCACCCCATCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCa                                                                                                              >  1:1797363/1‑131 (MQ=255)

                           tCACCCCATCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCa                                                                                                              <  2:1797363/131‑1 (MQ=255)

                           tCACCCCATCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCa                                                                                                              >  1:1706840/1‑131 (MQ=255)

                           tCACCCCATCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAg                                                                                                     >  2:75711/1‑140 (MQ=255)

                           tCACCCCATCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAg                                                                                                     >  2:139587/1‑140 (MQ=255)

                           tCACCCCATCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAg                                                                                                     >  2:1293230/1‑140 (MQ=255)

                           tCACCCCATCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAg                                                                                                     >  2:1066572/1‑140 (MQ=255)

                            cACCCCATCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGa                                                                                                    <  2:368336/140‑1 (MQ=255)

                              ccccATCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAAt                                                                                                  <  2:57210/140‑1 (MQ=255)

                                   tCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGTCACCCTTAAAGAATAGCCa                                                                                             <  1:1820002/140‑1 (MQ=255)

                                   tCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCa                                                                                                              <  2:1238565/123‑1 (MQ=255)

                                   tCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCa                                                                                                              >  1:1238565/1‑123 (MQ=255)

                                   tCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCa                                                                                             >  1:1287400/1‑140 (MQ=255)

                                   tCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCa                                                                                             >  1:237269/1‑140 (MQ=255)

                                   tCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCa                                                                                             >  1:1673246/1‑140 (MQ=255)

                                   tCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCa                                                                                             <  1:1066572/140‑1 (MQ=255)

                                     cAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAAt                                                                                           >  1:199846/1‑140 (MQ=255)

                                      aaTTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATg                                                                                          <  1:139587/140‑1 (MQ=255)

                                      aaTTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATg                                                                                          <  2:2077526/140‑1 (MQ=255)

                                      aaTTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATg                                                                                          <  2:411568/140‑1 (MQ=255)

                                       aTTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGc                                                                                         <  1:993715/140‑1 (MQ=255)

                                         tGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGctc                                                                                       >  2:1003390/1‑140 (MQ=255)

                                             tttttGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTAtt                                                                                   >  2:1891125/1‑140 (MQ=255)

                                                ttGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTaa                                                                                <  2:1589212/140‑1 (MQ=255)

                                                   aC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTc                                                                             <  2:1287400/140‑1 (MQ=255)

                                                        cTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCgg                                                                         >  2:1055514/1‑140 (MQ=255)

                                                         tGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGt                                                                        <  2:237269/140‑1 (MQ=255)

                                                          ggTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTGCTCACTTCACGTAAGGATGTGAATAATCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTa                                                                       <  2:1556913/140‑1 (MQ=255)

                                                          ggTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTa                                                                       <  1:357069/140‑1 (MQ=255)

                                                           gTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTaa                                                                      <  1:393747/140‑1 (MQ=255)

                                                           gTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTaa                                                                      >  1:1851563/1‑140 (MQ=255)

                                                            ttGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTaaa                                                                     <  2:544679/140‑1 (MQ=255)

                                                             tgtgACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAAt                                                                    <  2:1742919/140‑1 (MQ=255)

                                                                  cATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATCATGa                                                               <  1:1003390/140‑1 (MQ=255)

                                                                              cTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATCATGAAACATCTGCGCt                                                   <  1:1727609/140‑1 (MQ=255)

                                                                              cTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATCATGAAACATCTGCGCt                                                   <  1:1055514/140‑1 (MQ=255)

                                                                              cTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATCATGAAACATCTGCGCt                                                   <  1:1293230/140‑1 (MQ=255)

                                                                               tGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATCATGAAACATCTGCGCt                                                   <  1:310978/139‑1 (MQ=255)

                                                                               tGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATCATGAAACATCTGCGCt                                                   >  2:310978/1‑139 (MQ=255)

                                                                                 aaCGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATCATGAAACATCTGCGCTTAc                                                >  1:228397/1‑140 (MQ=255)

                                                                                 aaCGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATCATGAAACATCTGCGCTTAc                                                >  2:583571/1‑140 (MQ=255)

                                                                                      cgcAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATCATGAAACATCTGCGCTTACTCCTg                                           >  1:476446/1‑140 (MQ=255)

                                                                                           caCTCTGTGCATCCTCTCTGCGTTGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATCATGAAACATCTGCGCTTACTCCTGTATTa                                      <  1:1004815/140‑1 (MQ=255)

                                                                                           caCTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATCATGAAACATCTGCGCt                                                   <  2:568555/127‑1 (MQ=255)

                                                                                           caCTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATCATGAAACATCTGCGCt                                                   <  2:940944/127‑1 (MQ=255)

                                                                                           caCTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATCATGAAACATCTGCGCt                                                   >  1:568555/1‑127 (MQ=255)

                                                                                           caCTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATCATGAAACATCTGCGCTTACTCCTGTATTa                                      <  2:1851563/140‑1 (MQ=255)

                                                                                           caCTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATCATGAAACATCTGCGCTTACTCCTGTATTa                                      <  1:75711/140‑1 (MQ=255)

                                                                                                       ccTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATCATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAgg                          >  2:146330/1‑140 (MQ=255)

                                                                                                       ccTCTCTGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATCATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAgg                          >  1:1310540/1‑140 (MQ=255)

                                                                                                          ctctGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATCATGAAACATCTGCGCTTACTCCTGTAt                                        >  2:390914/1‑123 (MQ=255)

                                                                                                          ctctGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATCATGAAACATCTGCGCTTACTCCTGTAt                                        <  1:390914/123‑1 (MQ=255)

                                                                                                            ctGCGTCGTCCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATCATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGggcgg                     >  1:455925/1‑140 (MQ=255)

                                                                                                                 tcgtcCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATCATGAAACATCTGCGCTTACTCCTGTATTACGCa                                  <  2:45675/122‑1 (MQ=255)

                                                                                                                 tcgtcCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATCATGAAACATCTGCGCTTACTCCTGTATTACGCa                                  >  1:45675/1‑122 (MQ=255)

                                                                                                                 tcgtcCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATCATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATcg                <  1:863060/140‑1 (MQ=255)

                                                                                                                 tcgtcCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATCATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATcg                >  1:212548/1‑140 (MQ=255)

                                                                                                                    tcCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATCATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATcg                <  2:1966821/137‑1 (MQ=255)

                                                                                                                    tcCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATCATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATcg                >  1:1966821/1‑137 (MQ=255)

                                                                                                                    tcCTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATCATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCgcgc             >  2:616793/1‑140 (MQ=255)

                                                                                                                      cTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATCATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGccc           <  2:1673246/140‑1 (MQ=255)

                                                                                                                      cTCACTTCAGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATCATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGccc           <  1:583571/140‑1 (MQ=255)

                                                                                                                              aGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATCATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTa   >  2:742208/1‑140 (MQ=255)

                                                                                                                              aGGTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATCATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTa   <  2:516661/140‑1 (MQ=255)

                                                                                                                               ggTAAGGATGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATCATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTaa  <  1:1157145/140‑1 (MQ=255)

ACATGCTTGTCTTCCTGTTTTATTGTGTCACCCCATCCAATTGGATTTTTGAC‑TTCTGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATCATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAA  >  NC_000913/3573499‑3573764

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`