Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,600,532	C→A	R237L (CGA→CTA)	lsrR ←	DNA‑binding transcriptional repressor LsrR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,600,532	0	C	A	100.0%	303.7 / NA	84	R237L (CGA→CTA)	lsrR	DNA‑binding transcriptional repressor LsrR
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (37/47);  total (37/47)

CCACGCCAACCCGGACGGGTATGGTCTTCAGCGCGCTTAAAGGTAAGCCAATCAGTTCGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTCGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGTCGCATCGTCCTGTTGACTCACAGCACCAATGCCGACAATCGCCACATCCGCTGCTTGCGCGGCTAACAGAACATCTTTG  >  NC_000913/1600395‑1600663                                                                                                                                          |                                                                                                                                    ccACGCCAACCCGGACGGGTATGGTCTTCAGCGCGCTTAAAGGTAAGCCAATCAGTTCGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCT‑AAATGTCGCCAACCGCCCCTTTTAGGc                                                                                                                                  <  2:91040/140‑1 (MQ=255)  cACGCCAACCCGGACGGGTATGTTCTTCAGCGCGCTTAAAGGTAAGCTATTCAGTTCGTTATGTATTTTGATATTCGTGGCAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGc                                                                                                                                  <  1:993404/140‑1 (MQ=255)  cACGCCAACCCGGACGGGTATGGTCTTCAGCGCGCTTAAAGGTAAGCCAATCAGTTCGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGc                                                                                                                                  <  2:970045/140‑1 (MQ=255)  cACGCCAACCCGGACGGGTATGGTCTTCAGCGCGCTTAAAGGTAAGCCAATCAGTTCGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGc                                                                                                                                  <  1:1121838/140‑1 (MQ=255)  cACGCCAACCCGGACGGGTATGGTCTTCAGCGCGCTTAAAGGTAAGCCAATCAGTTCGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGc                                                                                                                                  <  1:1149049/140‑1 (MQ=255)  cACGCCAACCCGGACGGGTATGGTCTTCAGCGCGCTTAAAGGTAAGCCAATCAGTTCGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGc                                                                                                                                  <  1:549850/140‑1 (MQ=255)  cACGCCAACCCGGACGGGTATGGTCTTCAGCGCGCTTAAAGGTAAGCCAATCAGTTCGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGc                                                                                                                                  <  1:1275115/140‑1 (MQ=255)  cACGCCAACCCGGACGGGTATGGTCTTCAGCGCGCTTAAAGGTAAGCCAATCAGTTCGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGc                                                                                                                                  <  1:1311320/140‑1 (MQ=255)    cGCCAACCCGGACGGGTATGGTCTTCAGCGCGCTTAAAGGTAAGCCAATCAGTTCGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCa                                                                                                                                <  1:389059/140‑1 (MQ=255)    cGCCAACCCGGACGGGTATGGTCTTCAGCGCGCTTAAAGGTAAGCCAATCAGTTCGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCa                                                                                                                                <  2:934883/140‑1 (MQ=255)       cAACCCGGACGGGTATGGTCTTCAGCGCGCTTAAAGGTAAGCCAATCAGTTCGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCa                                                                                                                                <  2:403919/137‑1 (MQ=255)       cAACCCGGACGGGTATGGTCTTCAGCGCGCTTAAAGGTAAGCCAATCAGTTCGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCa                                                                                                                                >  1:403919/1‑137 (MQ=255)         aCCCGGACGGGTATGGTCTTCAGCGCGCTTAAAGGTAAGCCAATCAGTTCGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCa                                                                                                                                >  2:38963/1‑135 (MQ=255)         aCCCGGACGGGTATGGTCTTCAGCGCGCTTAAAGGTAAGCCAATCAGTTCGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCa                                                                                                                                <  1:38963/135‑1 (MQ=255)         aCCCGGACGGGTATGGTCTTCAGCGCGCTTAAAGGTAAGCCAATCAGTTCGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCAt                                                                                                                           >  2:717919/1‑140 (MQ=255)                cGGGTATGGTCTTCAGCGCGCTTAAAGGTAAGCCAATCAGTTCGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGt                                                                                                                    <  1:99984/140‑1 (MQ=255)                     aTGGTCTTCAGCGCGCTTAAAGGTAAGCCAATCAGTTCGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGcc                                                                                                               <  2:354929/140‑1 (MQ=255)                     aTGGTCTTCAGCGCGCTTAAAGGTAAGCCAATCAGTTCGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGcc                                                                                                               <  1:1189367/140‑1 (MQ=255)                         tCTTCAGCGCGCTTAAAGGTAAGCCAATCAGTTCGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTgg                                                                                                           <  2:1160735/140‑1 (MQ=255)                             cAGCGCGCTTAAAGGTAAGCCAATCAGTTCGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTgg                                                                                                           >  1:754065/1‑136 (MQ=255)                             cAGCGCGCTTAAAGGTAAGCCAATCAGTTCGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTgg                                                                                                           <  2:754065/136‑1 (MQ=255)                             cAGCGCGCTTAAAGGTAAGCCAATCAGTTCGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGa                                                                                                       >  1:928389/1‑140 (MQ=255)                             cAGCGCGCTTAAAGGTAAGCCAATCAGTTCGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGa                                                                                                       >  2:143976/1‑140 (MQ=255)                             cAGCGCGCTTAAAGGTAAGCCAATCAGTTCGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGa                                                                                                       >  1:469586/1‑140 (MQ=255)                             cAGCGCGCTTAAAGGTAAGCCAATCAGTTCGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGa                                                                                                       >  2:1107331/1‑140 (MQ=255)                                  cgcTTAAAGGTAAGCCAATCAGTTCGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATaa                                                                                                  >  2:1247228/1‑140 (MQ=255)                                  cgcTTAAAGGTAAGCCAATCAGTTCGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATaa                                                                                                  >  2:999697/1‑140 (MQ=255)                                  cgcTTAAAGGTAAGCCAATCAGTTCGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATaa                                                                                                  >  1:192520/1‑140 (MQ=255)                                   gcTTAAAGGTAAGCCAATCAGTTCGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAAc                                                                                                 >  1:546376/1‑140 (MQ=255)                                   gcTTAAAGGTAAGCCAATCAGTTCGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAAc                                                                                                 >  1:1245613/1‑140 (MQ=255)                                     ttAAAGGTAAGCCAATCAGTTCGTTATGTATTTTGATATTCGTGACAACGTCCCCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCg                                                                                               <  1:93895/140‑1 (MQ=255)                                     ttAAAGGTAAGCCAATCAGTTCGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCg                                                                                               <  1:1045096/140‑1 (MQ=255)                                     ttAAAGGTAAGCCAATCAGTTCGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCg                                                                                               <  1:476327/140‑1 (MQ=255)                                     ttAAAGGTAAGCCAATCAGTTCGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCg                                                                                               <  1:912013/140‑1 (MQ=255)                                     ttAAAGGTAAGCCAATCAGTTCGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCg                                                                                               <  2:846162/140‑1 (MQ=255)                                               gCCAATCAGTTCGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGa                                                                                     >  2:529749/1‑140 (MQ=255)                                               gCCAATCAGTTCGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGa                                                                                     >  1:1140041/1‑140 (MQ=255)                                               gCCAATCAGATCGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGa                                                                                     >  2:513639/1‑140 (MQ=255)                                                  aaTCAGTTCGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTg                                                                                  <  2:1274683/140‑1 (MQ=255)                                                   aTCAGTTCGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGt                                                                                 >  2:307395/1‑140 (MQ=255)                                                   aTCAGTTCGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGt                                                                                 >  2:814361/1‑140 (MQ=255)                                                   aTCAGTTCGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGt                                                                                 >  1:1330023/1‑140 (MQ=255)                                                   aTCAGTTCGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGt                                                                                 >  1:12867/1‑140 (MQ=255)                                                       gTTCGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGTCGCa                                                                             <  2:393841/140‑1 (MQ=255)                                                          cGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGTCGCATCg                                                                          >  2:174944/1‑140 (MQ=255)                                                          cGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGTCGCATCg                                                                          >  1:175562/1‑140 (MQ=255)                                                           gTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGTCGCATCGt                                                                         <  1:892731/140‑1 (MQ=255)                                                           gTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGTCGCATCGt                                                                         <  2:1150350/140‑1 (MQ=255)                                                             tATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGTCGCATCGTcc                                                                       <  2:175562/140‑1 (MQ=255)                                                             tATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGTCGCATCGTcc                                                                       <  2:1337218/140‑1 (MQ=255)                                                                  aTTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGTCGCATCGTCCTGTTg                                                                  >  2:899278/1‑140 (MQ=255)                                                                     ttGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGTCGCATCGTCCTGTTGACt                                                               <  1:263606/140‑1 (MQ=255)                                                                        atatTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGTCGCATCGTCCTGTTGACTcac                                                            <  1:1019694/140‑1 (MQ=255)                                                                        atatTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGTCGCATCGTCCTGTTGACTcac                                                            <  1:1107331/140‑1 (MQ=255)                                                                          tttCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGTCGCATCGTCCTGTTGACTCACAg                                                          <  2:87326/139‑1 (MQ=255)                                                                           ttCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGTCGCATCGTCCTGTTGACTCACAGc                                                         >  1:1325097/1‑140 (MQ=255)                                                                           ttCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGTCGCATCGTCCTGTTGACTCACAGc                                                         >  1:255139/1‑140 (MQ=255)                                                                            tCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGTCGCATCGTCCTGTTGACTCACAGCa                                                        <  2:1325423/140‑1 (MQ=255)                                                                                     cGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGTCGCATCGTCCTGTTGACTCACAGCACCAATGCCg                                               >  1:1471598/1‑140 (MQ=255)                                                                                     cGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGTCGCATCGTCCTGTTGACTCACAGCACCAATGCCg                                               >  1:715138/1‑140 (MQ=255)                                                                                      gTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGTCGCATCGTCCTGTTGACTCACAGCACCAATGCCGa                                              <  2:192520/140‑1 (MQ=255)                                                                                             tttGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGTCGCATCGTCCTGTTGACTCACAGCACCAATGCCGACAATCGc                                       >  1:928602/1‑140 (MQ=255)                                                                                             tttGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGTCGCATCGTCCTGTTGACTCACAGCACCAATGCCGACAATCGc                                       >  1:854108/1‑140 (MQ=255)                                                                                               tGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGTCGCATCGTCCTGTTGACTCACAGCACCAATGCCGACAATCGCca                                     <  1:20628/140‑1 (MQ=255)                                                                                               tGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGTCGCATCGTCCTGTTGACTCACAGCACCAATGCCGACAATCGCca                                     >  1:132548/1‑140 (MQ=255)                                                                                               tGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGTCGCATCGTCCTGTTGACTCACAGCACCAATGCCGACAATCGCca                                     <  2:715138/140‑1 (MQ=255)                                                                                               tGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGTCGCATCGTCCTGTTGACTCACAGCACCAATGCCGACAATCGCca                                     >  1:199132/1‑140 (MQ=255)                                                                                               tGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGTCGCATCGTCCTGTTGACTCACAGCACCAATGCCGACAATCGCca                                     >  2:1357088/1‑140 (MQ=255)                                                                                                     aaaaaaGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGTCGCATCGTCCTGTTGACTCACAGCACCAATGCCGACAATCGCCACATCCg                               >  2:518766/1‑140 (MQ=255)                                                                                                     aaaaaaGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGTCGCATCGTCCTGTTGACTCACAGCACCAATGCCGACAATCGCCACATCCg                               >  1:1363335/1‑140 (MQ=255)                                                                                                     aaaaaaGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGTCGCATCGTCCTGTTGACTCACAGCACCAATGCCGACAATCGCCACATCCg                               >  1:1463870/1‑140 (MQ=255)                                                                                                      aaaaaGTAGCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGTCGCATCGTCCTGTTGACTCACAGCACCAATGCCGACAATCGCCACATCCgc                              <  2:1131001/140‑1 (MQ=255)                                                                                                              gCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGTCGCATCGTCCTGTTGACTCACAGCACCAATGCCGACAATCGCCACATCCGCTGCTTgtg                      <  1:1018097/140‑3 (MQ=255)                                                                                                              gCCTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGTCGCATCGTCCTGTTGACTCACAGCACCAATGCCGACAATCGCCACATCCGCTGCTTgcg                      <  2:283991/140‑1 (MQ=255)                                                                                                                cTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGTCGCATCGTCCTGTTGACTCACAGCACCAATGCCGACAATCGCCACATCCGCTGCTTGcgcg                    <  1:1411573/140‑1 (MQ=255)                                                                                                                cTAAAATGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGTCGCATCGTCCTGTTGACTCACAGCACCAATGCCGACAATCGCCACATCCGCTGCTTGcgcg                    <  1:15074/140‑1 (MQ=255)                                                                                                                    aaTGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGTCGCATCGTCCTGTTGACTCACAGCACCAATGCCGACAATCGCCACATCCGCTGCTTGCGCGGCTa                >  2:1200772/1‑140 (MQ=255)                                                                                                                     aTGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGTCGCATCGTCCTGTTGACTCACAGCACCAATGCCGACAATCGCCACATCCGCTGCTTGCGCGGCTaa               <  2:1048875/140‑1 (MQ=255)                                                                                                                     aTGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGTCGCATCGTCCTGTTGACTCACAGCACCAATGCCGACAATCGCCACATCCGCTGCTTGCGCGGCTaa               <  2:132548/140‑1 (MQ=255)                                                                                                                     aTGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGTCGCATCGTCCTGTTGACTCACAGCACCAATGCCGACAATCGCCACATCCGCTGCTTGCGCGGCTaa               <  1:1053018/140‑1 (MQ=255)                                                                                                                      tGTCGCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGTCGCATCGTCCTGTTGACTCACAGCACCAATGCCGACAATCGCCACATCCGCTGCTTGCGCGGCTAAc              <  1:307395/140‑1 (MQ=255)                                                                                                                          gCCAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGTCGCATCGTCCTGTTGACTCACAGCACCAATGCCGACAATCGCCACATCCGCTGCTTGCGCGGCTAACAGaa          <  2:199132/140‑1 (MQ=255)                                                                                                                           ccAACCGCCCCTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGTCGCATCGTCCTGTTGACTCACAGCACCAATGCCGACAATCGCCACATCCGCTGCTTGCGCGGCTAACAGAAc         <  1:518766/140‑1 (MQ=255)                                                                                                                                  ccccTTTTAGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGTCGCATCGTCCTGTTGACTCACAGCACCAATGCCGACAATCGCCACATCCGCTGCTTGCGCGGCTAACAGAACATCTTTg  >  2:564183/1‑140 (MQ=255)                                                                                                                                          |                                                                                                                                    CCACGCCAACCCGGACGGGTATGGTCTTCAGCGCGCTTAAAGGTAAGCCAATCAGTTCGTTATGTATTTTGATATTCGTGACAACGTCACCTTTTGCATCAAAAAAGTAGCCTAAAATGTCGCCAACCGCCCCTTTTCGGCCAATCATTAACTGTTCGCCCTGGCTGATATAACCGGAGCGAATGATTGTCGCATCGTCCTGTTGACTCACAGCACCAATGCCGACAATCGCCACATCCGCTGCTTGCGCGGCTAACAGAACATCTTTG  >  NC_000913/1600395‑1600663

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑