BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,229,904	C→A	S164I (AGC→ATC)	hlyE ←	hemolysin E

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,229,904	0	C	A	100.0%	379.8 / NA	106	S164I (AGC→ATC)	hlyE	hemolysin E
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (59/47); total (59/47)

Only 100 of 106 total aligned reads displayed.

GAATCAGTTTTCCTTCAACTACGCCCGCAGCAATAGAATAGGAAATGATTAATCCAAATGGACCGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGCTGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACCAGCAGGGATTTTTGCGCTTCATTCAGCTTCGTGATGCCGTCATCCAGT  >  NC_000913/1229770‑1230038

gAATCAGTTTTCCTTCAACTACGCCCGCAGCAATAGAATAGGAAATGATTAATCCAAATGGACCGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCtt                                                                                                                                   >  2:1457942/1‑140 (MQ=255)

          tCCTTCAACTACGCCCGCAGCAATAGAATAGGAAATGATTAATCCAAATGGACCGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGaaa                                                                                                                         >  2:704335/1‑140 (MQ=255)

               cAACTACGCCCGCAGCAATAGAATAGGAAATGATTAATCCAAATGGACCGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCa                                                                                                                    >  2:375666/1‑140 (MQ=255)

                 aCTACGCCCGCAGCAATAGAATAGGAAATGATTAATCCAAATGGACCGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCAtt                                                                                                                  <  2:1163405/140‑1 (MQ=255)

                 aCTACGCCCGCAGCAATAGAATAGGAAATGATTAATCCAAATGGACCGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCAtt                                                                                                                  <  1:1190256/140‑1 (MQ=255)

                 aCTACGCCCGCAGCAATAGAATAGGAAATGATTAATCCAAATGGACCGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCAtt                                                                                                                  >  2:292025/1‑140 (MQ=255)

                 aCTACGCCCGCAGCAATAGAATAGGAAATGATTAATCCAAATGGACCGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCAtt                                                                                                                  <  1:1282520/140‑1 (MQ=255)

                     cGCCCGCAGCAATAGAATAGGAAATGATTAATCCAAATGGACCGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGtt                                                                                                              >  1:1156131/1‑140 (MQ=255)

                     cGCCCGCAGCAATAGAATAGGAAATGATTAATCCAAATGGACCGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGtt                                                                                                              >  2:685233/1‑140 (MQ=255)

                      gCCCGCAGCAATAGAATAGGAAATGATTAATCCAAATGGACCGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTa                                                                                                             <  2:448217/140‑1 (MQ=255)

                      gCCCGCAGCAATAGAATAGGAAATGATTAATCCAAATGGACCGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTa                                                                                                             >  2:520553/1‑140 (MQ=255)

                      gCCCGCAGCAATAGAATAGGAAATGATTAATCCAAATGGACCGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTa                                                                                                             >  2:325191/1‑140 (MQ=255)

                      gCCCGCAGCAATAGAATAGGAAATGATTAATCCAAATGGACCGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTa                                                                                                             >  1:752560/1‑140 (MQ=255)

                       cccGCAGCAATAGAATAGGAAATGATTAATCCAAATGGACCGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTaa                                                                                                            <  1:685233/140‑1 (MQ=255)

                        ccGCAGCAATAGAATAGGAAATGATTAATCCAAATGGACCGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAAc                                                                                                           >  2:561044/1‑140 (MQ=255)

                         cGCAGCAATAGAATAGGAAATGATTAATCCAAATGGACCGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACt                                                                                                          <  1:292025/140‑1 (MQ=255)

                          gcagcaATAGAATAGGAAATGATTAATCCAAATGGACCGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTg                                                                                                         >  1:1360995/1‑140 (MQ=255)

                           cagcaATAGAATAGGAAATGATTAATCCAAATGGACCGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTgg                                                                                                        <  1:983168/140‑1 (MQ=255)

                            agcaATAGAATAGGAAATGATTAATCCAAATGGACCGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGc                                                                                                       <  2:752560/140‑1 (MQ=255)

                                 tagaatagGAAATGATTAATCCAAATGGACCGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCt                                                                                                  <  2:1008310/140‑1 (MQ=255)

                                      tagGAAATGATTAATCCAAATGGACCGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGc                                                                                             >  2:1105497/1‑140 (MQ=255)

                                        ggAAATGATTAATCCAAATGGACCGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCca                                                                                           >  1:880010/1‑140 (MQ=255)

                                        ggAAATGATTAATCCAAATGGACCGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCca                                                                                           >  1:1116604/1‑140 (MQ=255)

                                         gAAATGATTAATCCAAATGGACCGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCcag                                                                                          <  2:1156131/140‑1 (MQ=255)

                                            aTGATTAATCCAAATGGACCGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCcagcag                                                                                       <  2:656763/140‑1 (MQ=255)

                                              gATTAATCCAAATGGACCGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGtt                                                                                     >  1:334223/1‑140 (MQ=255)

                                              gATTAATCCAAATGGACCGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGtt                                                                                     >  1:33629/1‑140 (MQ=255)

                                              gATTAATCCAAATGGACCGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGtt                                                                                     <  1:1362370/140‑1 (MQ=255)

                                              gATTAATCCAAATGGACCGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGtt                                                                                     >  1:85205/1‑140 (MQ=255)

                                              gATTAATCCAAATGGACCGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGtt                                                                                     >  2:263349/1‑140 (MQ=255)

                                                ttAATCCAAATGGACCGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTc                                                                                   >  1:1174515/1‑140 (MQ=255)

                                                   aTCCAAATGGACCGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCg                                                                                >  1:281191/1‑140 (MQ=255)

                                                   aTCCAAATGGACCGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCg                                                                                >  1:246450/1‑140 (MQ=255)

                                                       aaaTGGACCGGCGACGACACCGGCTGCGGCACCAGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAg                                                                            <  1:325191/140‑1 (MQ=255)

                                                         aTGGACCGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTTATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCg                                                                          >  2:1192260/1‑140 (MQ=255)

                                                         aTGGACCGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCg                                                                          <  1:1457942/140‑1 (MQ=255)

                                                         aTGGACCGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCg                                                                          >  1:1241619/1‑140 (MQ=255)

                                                              ccGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCgttgtt                                                                     >  1:865467/1‑140 (MQ=255)

                                                              ccGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCgttgtt                                                                     >  2:786682/1‑140 (MQ=255)

                                                              ccGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCgttgtt                                                                     <  1:375666/140‑1 (MQ=255)

                                                              ccGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCg                                                                          >  2:1073980/1‑135 (MQ=255)

                                                              ccGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCg                                                                          <  1:1073980/135‑1 (MQ=255)

                                                                 gCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGaa                                                                  <  1:704335/140‑1 (MQ=255)

                                                                  cgacgaCACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGaaa                                                                 >  1:352384/1‑140 (MQ=255)

                                                                      gacACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACttt                                                             <  2:1318160/140‑1 (MQ=255)

                                                                       acacCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTtg                                                            >  2:474382/1‑140 (MQ=255)

                                                                        cacCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTtgt                                                           <  2:281191/140‑1 (MQ=255)

                                                                         acCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTtgtg                                                          <  1:786682/140‑1 (MQ=255)

                                                                           cGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAg                                                        >  2:1327259/1‑140 (MQ=255)

                                                                           cGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAg                                                        >  1:864929/1‑140 (MQ=255)

                                                                           cGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAg                                                        >  2:344027/1‑140 (MQ=255)

                                                                              cTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTtgt                                                           <  1:664944/134‑1 (MQ=255)

                                                                              cTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTtgt                                                           >  2:664944/1‑134 (MQ=255)

                                                                               tGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTa                                                    <  2:972057/140‑1 (MQ=255)

                                                                                gCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTAc                                                   <  1:1433755/140‑1 (MQ=255)

                                                                                 cGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTAcc                                                  >  2:1562752/1‑140 (MQ=255)

                                                                                  ggCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACca                                                 >  2:1194425/1‑140 (MQ=255)

                                                                                    cACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACcagc                                               <  2:33629/140‑1 (MQ=255)

                                                                                            tatGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACCAGCAGGGAttt                                       <  1:305049/140‑1 (MQ=255)

                                                                                                 ttccttccTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACCAGCAGGGATTTTTgcg                                  <  1:1327259/140‑1 (MQ=255)

                                                                                                 ttccttccTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACCAGCAGGGATTTTTgcg                                  <  1:344027/140‑1 (MQ=255)

                                                                                                 ttccttccTGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACCAGCAGGGATTTTTgcg                                  <  2:1174515/140‑1 (MQ=255)

                                                                                                   ccttcctGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACCAGCAGGGATTTTTGCGCt                                >  2:1090185/1‑140 (MQ=255)

                                                                                                   ccttcctGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACCAGCAGGGATTTTTGCGCt                                >  1:817072/1‑140 (MQ=255)

                                                                                                    cttcctGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACCAGCAGGGATTTTTGCGCtt                               >  2:624613/1‑140 (MQ=255)

                                                                                                    cttcctGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACCAGCAGGGATTTTTGCGCtt                               >  1:22367/1‑140 (MQ=255)

                                                                                                      tcctGATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACCAGCAGGGATTTTTGCGCttca                             >  1:1288128/1‑140 (MQ=255)

                                                                                                          gATTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACCAGCAGGGATTTTTGCGCttcattca                         >  1:256488/1‑140 (MQ=255)

                                                                                                           aTTTTATCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACCAGCAGGGATTTTTGCGCTTCATTCAg                        >  2:827170/1‑140 (MQ=255)

                                                                                                                 tCTACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACCAGCAGGGATTTTTGCGCTTCATTCAGCTTCGt                  <  1:624613/140‑1 (MQ=255)

                                                                                                                   tACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACCAGCAGGGATTTTTGCGCTTCATTCAGCTTCGTGa                <  1:561044/140‑1 (MQ=255)

                                                                                                                   tACCTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACCAGCAGGGATTTTTGCGCTTCATTCAGCTTCGTGa                <  2:1360995/140‑1 (MQ=255)

                                                                                                                     ccTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACCAGCAGGGATTTTTGCGCTTCATTCAGCTTCGTGATg              >  1:675737/1‑140 (MQ=255)

                                                                                                                     ccTGTGACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACCAGCAGGGATTTTTGCGCTTCATTCAGCTTCGTGATg              >  1:86735/1‑140 (MQ=255)

                                                                                                                        gtgACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACCAGCAGGGATTTTTGCGCTTCATTCAGCTTCGTGATGCCg           <  2:675737/140‑1 (MQ=255)

                                                                                                                        gtgACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACCAGCAGGGATTTTTGCGCTTCATTCAGCTTCGTGATGCCg           <  2:541022/140‑1 (MQ=255)

                                                                                                                         tgACTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACCAGCAGGGATTTTTGCGCTTCATTCAGCTTCGTGATGCCGt          <  1:1105497/140‑1 (MQ=255)

                                                                                                                           gcTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACCAGCAGGGATTTTTGCGCTTCATTCAGCTTCGTGATGCCGTCa        >  2:1119366/2‑140 (MQ=255)

                                                                                                                           aCTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACCAGCAGGGATTTTTGCGCTTCATTCAGCTTCGTGATGCCGTCa        <  2:246450/140‑1 (MQ=255)

                                                                                                                           aCTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACCAGCAGGGATTTTTGCGCTTCATTCAGCTTCGTGATGCCGTCa        <  1:267947/140‑1 (MQ=255)

                                                                                                                           aCTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACCAGCAGGGATTTTTGCGCTTCATTCAGCTTCGTGATGCCGTCa        >  1:705889/1‑140 (MQ=255)

                                                                                                                           aCTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACCAGCAGGGATTTTTGCGCTTCATTCAGCTTCGTGATGCCGTCa        >  1:37264/1‑140 (MQ=255)

                                                                                                                           aCTGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACCAGCAGGGATTTTTGCGCTTCATTCAGCTTCGTGATGCCGTCa        >  2:267947/1‑140 (MQ=255)

                                                                                                                             tGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACCAGCAGGGATTTTTGCGCTTCATTCAGCTTCGTGATGCCGTCATc      <  2:1465987/140‑1 (MQ=255)

                                                                                                                             tGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACCAGCAGGGATTTTTGCGCTTCATTCAGCTTCGTGATGCCGTCATc      <  2:1288128/140‑1 (MQ=255)

                                                                                                                             tGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACCAGCAGGGATTTTTGCGCTTCATTCAGCTTCGTGATGCCGTCATc      <  1:1119366/140‑1 (MQ=255)

                                                                                                                             tGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACCAGCAGGGATTTTTGCGCTTCATTCAGCTTCGTGATGCCGTCATc      >  1:499901/1‑140 (MQ=255)

                                                                                                                             tGGAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACCAGCAGGGATTTTTGCGCTTCATTCAGCTTCGTGATGCCGTCATc      <  1:1418626/140‑1 (MQ=255)

                                                                                                                               gAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACCAGCAGGGATTTTTGCGCTTCATTCAGCTTCGTGATGCCGTCATCCa    <  2:256488/140‑1 (MQ=255)

                                                                                                                               gAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACCAGCAGGGATTTTTGCGCTTCATTCAGCTTCGTGATGCCGTCATCCa    >  2:969117/1‑140 (MQ=255)

                                                                                                                               gAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACCAGCAGGGATTTTTGCGCTTCATTCAGCTTCGTGATGCCGTCATCCa    <  2:107102/140‑1 (MQ=255)

                                                                                                                               gAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACCAGCAGGGATTTTTGCGCTTCATTCAGCTTCGTGATGCCGTCATCCa    <  1:1429378/140‑1 (MQ=255)

                                                                                                                               gAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACCAGCAGGGATTTTTGCGCTTCATTCAGCTTCGTGATGCCGTCATCCa    >  1:459867/1‑140 (MQ=255)

                                                                                                                               gAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACCAGCAGGGATTTTTGCGCTTCATTCAGCTTCGTGATGCCGTCATCCa    >  1:1524890/1‑140 (MQ=255)

                                                                                                                               gAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACCAGCAGGGATTTTTGCGCTTCATTCAGCTTCGTGATGCCGTCATCCa    >  1:1525872/1‑140 (MQ=255)

                                                                                                                               gAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACCAGCAGGGATTTTTGCGCTTCATTCAGCTTCGTGATGCCGTCATCCa    >  2:504859/1‑140 (MQ=255)

                                                                                                                               gAAATAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACCAGCAGGGATTTTTGCGCTTCATTCAGCTTCGTGATGCCGTCATCCa    <  1:520553/140‑1 (MQ=255)

                                                                                                                                aaaTAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACCAGCAGGGATTTTTGCGCTTCATTCAGCTTCGTGATGCCGTCATCCAg   >  2:945288/1‑140 (MQ=255)

                                                                                                                                aaaTAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACCAGCAGGGATTTTTGCGCTTCATTCAGCTTCGTGATGCCGTCATCCAg   >  2:1526048/1‑140 (MQ=255)

                                                                                                                                 aaTAGATGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACCAGCAGGGATTTTTGCGCTTCATTCAGCTTCGTGATGCCGTCATCCAGt  <  2:483090/140‑1 (MQ=255)

GAATCAGTTTTCCTTCAACTACGCCCGCAGCAATAGAATAGGAAATGATTAATCCAAATGGACCGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGCTGCTTTTTTCTGAAAAATCATTGGTTAACTGGCTATCTAACGCCAGCAGTTTCCCGGAAGCGTTGTTGAAACTTTGTGAGCTTACCAGCAGGGATTTTTGCGCTTCATTCAGCTTCGTGATGCCGTCATCCAGT  >  NC_000913/1229770‑1230038

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`