New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 375059NA (NA)9 (0.270)
+T
8/274 2.0 NA noncoding (28/34 nt) other REP31c
?NC_000913 = 377491 NA (NA)noncoding (32/34 nt) other REP32d

CTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAA  >  NC_000913/377358‑377628
                                                                                                                                       |                                                                                                                                         
ttatcaggcctacaaattctcgcgccacccgtaggccggataaggcgttcacgccgcatccggcagtcgtgcGCAGATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCgg                                                                                                                                      >  1:443193‑M2/73‑140 (MQ=255)
                 tctcgcgccacccgtaggccggataaggcgttcacgccgcatccggcagtcgtgcGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCAcg                                                                                                                        >  1:357978‑M2/56‑136 (MQ=255)
                 tctcgcgccacccgtaggccggataaggcgttcacgccgcatccggcagtcgtgcGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCAcg                                                                                                                        <  2:357978‑M2/81‑1 (MQ=255)
                      cgccatccgtaggccggataaggcgttcacgccgcatccggcagtcgtgcGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCg                                                                                                               >  1:565941‑M2/51‑140 (MQ=255)
                      cgccacccgtaggccggataaggcgttcacgccgcatccggcagtcgtgcGCAGATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGtt                                                                                                                            >  2:245835‑M2/51‑128 (MQ=255)
                      cgccacccgtaggccggataaggcgttcacgccgcatccggcagtcgtgcGCAGATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGtt                                                                                                                            <  1:245835‑M2/78‑1 (MQ=255)
                      cgccacccgtaggccggataaggcgttcacgccgcatccggcagtcgtgcGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCg                                                                                                               >  1:562614‑M2/51‑140 (MQ=255)
                      cgccacccgtaggccggataaggcgttcacgccgcatccggcagtcgtgcGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCg                                                                                                               >  1:548153‑M2/51‑140 (MQ=255)
                      cgccacccgtaggccggataaggcgttcacgccgcatccggcagtcgtgcGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCg                                                                                                               >  1:4770‑M2/51‑140 (MQ=255)
                      cgccacccgtaggccggataaggcgttcacgccgcatccggcagtcgtgcGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCACATCCg                                                                                                               >  1:47767‑M2/51‑140 (MQ=255)
                                  aCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCta                                                                                                   <  1:83351/140‑1 (MQ=255)
                                      gataaggcgttcacgccgcatccggcagtcgtgcGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCtattat                                                                                               >  1:89085‑M2/35‑140 (MQ=255)
                                       ataaggctttcacgccgcatccggcagtcgtgcGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATc                                                                                              <  2:350529‑M2/107‑1 (MQ=255)
                                       ataaggcgttcacgccgcatccggcagtcgtgcGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATc                                                                                              <  2:567135‑M2/107‑1 (MQ=255)
                                           ggcgttcacgccgcatccggcagtcgtgcGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACg                                                                                          >  1:6732‑M2/30‑140 (MQ=255)
                                              gttcacgccgcatccggcagtcgtgcGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCat                                                                                       <  2:562614‑M2/114‑1 (MQ=255)
                                              gttcacgccgcatccggcagtcgtgcGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCACATCCGGCAGTCGTGCTATTATCAACGCat                                                                                       <  2:47767‑M2/114‑1 (MQ=255)
                                               ttcacgccgcatccggcagtcgtgcGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCata                                                                                      <  2:19889‑M2/115‑1 (MQ=255)
                                                              gcagtcgtgcGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCg                                                                       <  2:2562‑M2/130‑1 (MQ=255)
                                                                   cgtgcGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTa                                                                  <  2:274998‑M2/135‑1 (MQ=255)
                                                                   cGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGaccggataaggcgttcacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaacgcgtcttatc                                                                   <  1:306497‑M2/140‑73 (MQ=255)
                                                                      gcGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGc                                                               <  2:10654‑M2/138‑1 (MQ=255)
                                                                         ccATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGc                                                                        >  2:32284/1‑128 (MQ=255)
                                                                         ccATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGc                                                                        <  1:32284/128‑1 (MQ=255)
                                                                             aTGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAatat                                                          >  1:11287/1‑140 (MQ=255)
                                                                                  tGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCg                                                     >  1:372989/1‑140 (MQ=255)
                                                                                   gATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGgccggataaggcgttcacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaacgcgtcttatcagacctacaaattct                                                    <  1:56971‑M2/140‑88 (MQ=255)
                                                                                    aTGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGgccggataaggcgttcacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaacgcgtcttatcagacctacaaattctc                                                   >  2:56971‑M2/1‑52 (MQ=255)
                                                                                    aTGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATCATCAACGCATATTCAGTTTATTGGCGTGGt                                                                   >  2:503524/1‑124 (MQ=255)
                                                                                    aTGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATCATCAACGCATATTCAGTTTATTGGCGTGGt                                                                   <  1:503524/124‑1 (MQ=255)
                                                                                        gACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGaccggataaggcgttcacgccgcatccggcagtcgtgcgccatgcctgatgcgacgctaacgcgtcttatcagacctacaaattctcacgcc                                               >  2:170820‑M2/1‑48 (MQ=255)
                                                                                        gACGCTATGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGgccggataaggcgttcacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaacgcgtcttatcagacctacaaattctcacgc                                               >  1:381217‑M2/1‑48 (MQ=255)
                                                                                         aCGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATaa                                              >  1:250086/1‑140 (MQ=255)
                                                                                              ttGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGgccggataaggcgttcacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaacgcgtcttatcagacctacaaattctcacgccatccg                                         >  2:356488‑M2/1‑42 (MQ=255)
                                                                                                gcgcGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGga                                       <  2:457886/140‑1 (MQ=255)
                                                                                                gcgcGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGga                                       <  2:548153/140‑1 (MQ=255)
                                                                                                gcgcGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGga                                       <  2:6732/140‑1 (MQ=255)
                                                                                                      cTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGaccggataaggcgttcacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattccc                                                   <  1:472674‑M2/122‑89 (MQ=255)
                                                                                                      cTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGaccggataaggcgttcacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattccc                                                   >  2:472674‑M2/1‑34 (MQ=255)
                                                                                                       ttATCAGGCCTACGGTTTATGGGCGAAGTGTAGaccggataaggcgttcacgccgcatccggcagtcgtgcgccatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccatccgtaggccggat                                <  1:485127‑M2/140‑108 (MQ=255)
                                                                                                       ttATCAGGCCTACGGTTTATGGGCGAAGTGTAGaccggataaggcgttcacgccgcatccggcagtcgtgcgccatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccatccgtaggccggat                                <  1:2257‑M2/140‑108 (MQ=255)
                                                                                                       ttATCAGGCCTACGGTTTATGGGCGAAGTGTAGaccggataaggcgttcacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccatccgtaggccgga                                <  1:370488‑M2/140‑108 (MQ=255)
                                                                                                       ttATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGga                                       <  1:240795/133‑1 (MQ=255)
                                                                                                       ttATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGga                                       >  2:240795/1‑133 (MQ=255)
                                                                                                         aTCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAaata                              >  2:12316/1‑140 (MQ=255)
                                                                                                              gCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGAc                                    <  1:275061/129‑1 (MQ=255)
                                                                                                              gCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGAc                                    >  2:275061/1‑129 (MQ=255)
                                                                                                               ccTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCt                        <  1:12316/140‑1 (MQ=255)
                                                                                                                cTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGAc                                    <  2:139641/127‑1 (MQ=255)
                                                                                                                cTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGAc                                    >  1:139641/1‑127 (MQ=255)
                                                                                                                cTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCtg                       <  2:250086/140‑1 (MQ=255)
                                                                                                                cTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCtg                       >  2:113670/1‑140 (MQ=255)
                                                                                                                   cGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGa                    >  1:379813/1‑140 (MQ=255)
                                                                                                                        tatgggcgaAGTGTAGaccggataaggcgttcacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattctcgcgccacccgtaggccggataaggcgttcacgccgc               <  1:410198‑M2/137‑125 (MQ=255)
                                                                                                                         atgggcgAAGTGTAGaccggataaggcgttcacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccatccgtaggccggataaggcgttcacgccgca              <  2:476584‑M2/138‑126 (MQ=255)
                                                                                                                            ggCGAAGTGTAGgccggataaggcgttcacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaacgcgtcttatcagacctacaaattctcacgccatccgtaggccggataaggcgttcacgccgcatcc           <  2:233238‑M2/140‑129 (MQ=255)
                                                                                                                             gCGAAGTGTAGaccggataaggcgtttacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattctcgcgccacccgtaggccggataaggcgttcacg                   <  1:330147‑M2/131‑121 (MQ=255)
                                                                                                                             gCGAAGTGTAGaccggataaggcgtttacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattctcgcgccacccgtaggccggataaggcgttcacg                   >  2:330147‑M2/1‑11 (MQ=255)
                                                                                                                             gCGAAGTGTAGaccggataaggcgttcacgccgcatccggcagtcgtgcgccatgcctgatgcgacgctttgcgcgtcttatcagacctacaaattctcacgccatccgtaggccggataaggcgtt                       <  2:418745‑M2/127‑117 (MQ=255)
                                                                                                                             gCGAAGTGTAGaccggataaggcgttcacgccgcatccggcagtcgtgcgccatgcctgatgcgacgctttgcgcgtcttatcagacctacaaattctcacgccatccgtaggccggataaggcgtt                       >  1:418745‑M2/1‑11 (MQ=255)
                                                                                                                             gCGAAGTGTAGaccggataaggcgttcacgccgcatccggcagtcgtgcgccatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccatccgtaggccggataaggcgtt                        <  1:63840‑M2/126‑116 (MQ=255)
                                                                                                                             gCGAAGTGTAGaccggataaggcgttcacgccgcatccggcagtcgtgcgccatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccatccgtaggccggataaggcgtt                        >  2:63840‑M2/1‑11 (MQ=255)
                                                                                                                             gCGAAGTGTAGaccggataaggcgttcacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccatccgtaggccggataaggcgttcacgccgcatccg          <  1:528028‑M2/140‑130 (MQ=255)
                                                                                                                             gCGAAGTGTAGaccggataaggcgttcacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccatccgtaggccggataaggcgttcacgccgcatccg          <  1:266182‑M2/140‑130 (MQ=255)
                                                                                                                             gCGAAGTGTAGaccggataaggcgttcacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccatccgtaggccggataaggcgttcacgccgcatccg          <  1:97475‑M2/140‑130 (MQ=255)
                                                                                                                             gCGAAGTGTAGaccggataaggcgttcacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaacgcgtcttatcagacctacaaattctcacgccatccgtaggccggataaggcgttcacgccgcatccg          <  2:53661‑M2/140‑130 (MQ=255)
                                                                                                                              cGAAGTGTAGaccggataaggcgttcacgccgcatccggcagtcgtgcgccatgcctgatgcgacgctttgcgcgtcttatcaggcctacaaattctcgcgccacccgtaggccggataaggcgttcacgccgcatccgg         <  2:51669‑M2/140‑131 (MQ=255)
                                                                                                                              cGAAGTGTAGaccggataaggcgttcacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccatccgtaggccggataaggcgttcacgccgcatccgg         <  1:114663‑M2/140‑131 (MQ=255)
                                                                                                                               gAAGTGTAGaccggataaggcgttcacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccatccgtaggccggataaggcgttcacgccgcatccggc        <  2:145372‑M2/140‑132 (MQ=255)
                                                                                                                                aaGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGt       <  2:4770/140‑1 (MQ=255)
                                                                                                                                aaGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGt       <  2:372989/140‑1 (MQ=255)
                                                                                                                                aaGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGt       <  2:4891/140‑1 (MQ=255)
                                                                                                                                   tgtAGaccggataaggcgttcacgccgcatccggcagtcgtgcgccatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccatccgtaggccggataaggcgttcacgccgcatccggcagtcg    >  2:2257‑M2/1‑5 (MQ=255)
                                                                                                                                   tgtAGaccggataaggcgttcacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattctcgcgccacccgtaggccggataaggcgttcacgccgcatccggcagtc    >  2:410198‑M2/1‑5 (MQ=255)
                                                                                                                                    gtAGaccggataaggcgttcacgccgcatccggcagtcgtgcgccatgcctgatgcgacgctttgcgcgtcttatcaggcctacaaattctcgcgccacccgtaggccggataaggcgttcacgccgcatccggcagtcg   >  1:51669‑M2/1‑4 (MQ=255)
                                                                                                                                    gtAGaccggataaggcgttcacgccgcatccggcagtcgtgcgccatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattctcgcgccacccgtaggccgggataaggcgttcacgccgcatccggcagtcg   >  2:458899‑M2/1‑4 (MQ=255)
                                                                                                                                    gtAGaccggataaggcgttcacgccgcatccggcagtcgtgcgccatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccatccgtaggccggataaggcgttcacgccgcatccggcagtcgt   >  2:485127‑M2/1‑4 (MQ=255)
                                                                                                                                     tAGaccggataaggcgttcacgccgcatccggcagtcgtgcgccatgcctgatgcgacgctttgcgcgtcttatcaggcctacaaattctcgcgccacccgtaggccggataaggcgttcacgccgcatccggcagtcgt  >  2:411859‑M2/1‑3 (MQ=255)
                                                                                                                                     tAGaccggataaggcgttcacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccatccgtaggccggataaggcgttcacgccgcatccggcagtcgt  >  2:370488‑M2/1‑3 (MQ=255)
                                                                                                                                     tAGaccggataaggcgttcacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccatccgtaggccggataaggcgttcacgccgcatccggcagtcgt  >  1:476584‑M2/1‑3 (MQ=255)
                                                                                                                                     tAGaccggataaggcgttcacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccatccgtaggccggataaggcgttcacgccgcatccggcagtcgt  >  2:306497‑M2/1‑3 (MQ=255)
                                                                                                                                     tAGaccggataaggcgttcacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccatccgtaggccggataaggcgttcacgccgcatccggcagtcgt  >  2:114663‑M2/1‑3 (MQ=255)
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CTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAA  >  NC_000913/377358‑377628

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.