| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3045997 | 16 (0.480) | 35 (1.120) | 8/256 | 1.9 | 70.8% | intergenic (‑96/+171) | ygfF/gcvP | putative NAD(P)‑binding oxidoreductase with NAD(P)‑binding Rossmann‑fold domain/glycine decarboxylase |
| ? | NC_000913 | = 3046078 | 14 (0.450) | intergenic (‑177/+90) | ygfF/gcvP | putative NAD(P)‑binding oxidoreductase with NAD(P)‑binding Rossmann‑fold domain/glycine decarboxylase | |||||
TTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGCTTTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAGCAGAACAGGTTACGGTCG > NC_000913/3045939‑3046216 | ttGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGCTTTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAg > 1:568362/1‑140 (MQ=255) agaTTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGCTTTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGggg > 1:306309‑M2/1‑137 (MQ=255) gaTTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGCTTTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGgggc < 2:432082‑M2/140‑5 (MQ=255) tGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGCTTTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGgggcgag > 2:84104‑M2/1‑133 (MQ=255) gCTCAATCTTCAATGTTGGCACGCTTTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACTGTCTGAg < 1:185437/140‑1 (MQ=255) gCTCAATCTTCAATGTTGGCACGCTTTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACTGTCTGAg < 2:568362/140‑1 (MQ=255) aaTGTTGGCACGCTTTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTAc > 2:456352/1‑140 (MQ=255) tGGCACGCTTTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACTGTCTGAGCACtt > 2:311987/1‑129 (MQ=255) tGGCACGCTTTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACTGTCTGAGCACtt < 1:311987/129‑1 (MQ=255) CGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGgcg < 1:567779‑M1/140‑1 (MQ=255) aGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAgcgc < 1:432082/140‑1 (MQ=255) agGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAg > 2:82689/1‑140 (MQ=255) gggTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAg > 1:464670/1‑140 (MQ=255) aGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCTGAAAgggcgagggggaaaagcgtgccaacattgaagattgagccagtttgttagcaatctcaaagatacgtcaacgaattaattt < 2:12055‑M2/140‑82 (MQ=255) aGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGgggcgagggggaaaagcgtgccatcattgaagattgagccagtttgttagcaatctcaaagatacgtcaacgaattaattt < 2:353639‑M2/140‑82 (MQ=255) aGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGgggcgagggggaaaagcgtgccaacattgaagattgagccagtttgttagcaatctcaaagatacgtcaacgaattaattt < 1:398326‑M2/140‑82 (MQ=255) aGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGgggcgagggggaaaagcgtgccaacattgaagattgagccagtttgttagcaatctcaaagatacgtcaacgaattaattt < 1:335121‑M2/140‑82 (MQ=255) aGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGgggcgagggggaaaagcgtgccaacattgaagattgagccagtttgttagcaatctcaaagatacgtcaacgaattaattt < 2:513740‑M2/140‑82 (MQ=255) aGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGgggcgagggggaaaagcgtgccaacattgaagattgagccagtttgttagcaatctcaaagatacgtcaacgaattaattt < 2:304623‑M2/140‑82 (MQ=255) aGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGgggcgagggggaaaagcgtgccaacattgaagattgagccagtttgttagcaatctcaaagatacgtcaacgaattaattt < 1:444953‑M2/140‑82 (MQ=255) aGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGgggcgagggggaaaagcgtgccaacattgaagattgagccagtttgttagcaatctcaaagatacgtcaacgaattaattt < 2:19546‑M2/140‑82 (MQ=255) aGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGgggcgagggggaaaagcgtgccaacattgaagattgagccagtttgttagcaatctcaaagatacgtcaacgaattaattt < 2:527707‑M2/140‑82 (MQ=255) aGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGgggcgagggggaaaagcgtgccaacattgaagattgagccagtttgttagcaatctcaaagatacgtcaacgaattaattt < 2:128548‑M2/140‑82 (MQ=255) aGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGgggcgagggggaaaagcgtgccaacattgaagattgagccagtttgttagcaatctcaaagatacgtcaacgaattaattt < 1:572909‑M2/140‑82 (MQ=255) aGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGgggcgagggggaaaagcgtgccaacattgaagattgagccagtttgttagcaatctcaaagatacgtcaacgaattaattt < 1:188452‑M2/140‑82 (MQ=255) aGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGggcgagggggaaaagcgtgccaacattgaagattgagccagtttgttagcaatctcaaagatacgtcaacgaattaatttt < 1:102349‑M2/140‑82 (MQ=255) aGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGaa > 1:72858/1‑140 (MQ=255) aGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCT‑CCCAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAAt > 2:159015/1‑140 (MQ=255) ggTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGgggcgagggggaaaagcgtgccaacattgaagattgagccagtttgttagcaatctcaaagatacgtcaacgaattaattttt > 1:19546‑M2/1‑57 (MQ=255) cgcCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCTGAAAgggcgagggggaaaagcgtgccaacattgaagattgagccagtttgttagcaatctcaaagatacgtcaacgaattaatttttctcggaaaaaca > 1:12055‑M2/1‑45 (MQ=255) ggCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGgggcgagggggaaaagcgtgccaacattgaagattgagccagtttgttagcaatctcaaagatacgtcaacgaattaatttttctcggaaaaacaaatggctata > 1:513740‑M2/1‑35 (MQ=255) ttCCCCTCACCCTAACCCTCTCCCCAAAGgggcgagggggaaaagcgtgccaacattgaagattgagccagtttgttagcaatctcaaagatacgtcaacgaattaatttttctcggaaaaacaaatggctatagcactt > 1:527707‑M2/1‑29 (MQ=255) ccccTCACCCTAACCCTCTCCCCAAAGggcgagggggaaaagcgtgccaacattgaagattgagccagtttgttagcaatctcaaagatacgtcaacgaattaatttttctcggaaaaacaaatggctatagcacttgtg > 2:102349‑M2/1‑27 (MQ=255) tCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAg < 2:72858/140‑1 (MQ=255) cccTAACCCTCTCCCCAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGATTTACTGGTATTCGCTAATCGGTACGCAGGAg < 2:258734/140‑1 (MQ=255) aaCCCTCTCCCCAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAGCAGa < 2:464670/140‑1 (MQ=255) tcCCCAAAGgggcgagggggaaaagcgtgccaacattgaagatttagccagtttgttagcaatctcaaagatacgtcaacgaattaatttttctcggaaaaacaaatggctatagcacttgtgactggtggcagtcgcgg < 1:541683‑M2/140‑132 (MQ=255) tcCCCAAAGgggcgagggggaaaagcgtgccaacattgaagattgagccagtttgttagcaatctcaaagatacgtcaacgaattaatttttctcggaaacacaaatggctatagcacttgtgactggtggcagtcgcgg < 1:464408‑M2/140‑132 (MQ=255) tcCCCAAAGgggcgagggggaaaagcgtgccaacattgaagattgagccagtttgttagcaatctcaaagatacgtcaacgaattaatttttctcggaaaaacaaatggctatagcacttgtgactggtggcagtcgcgg < 1:126111‑M2/140‑132 (MQ=255) tcCCCAAAGgggcgagggggaaaagcgtgccaacattgaagattgagccagtttgttagcaatctcaaagatacgtcaacgaattaatttttctcggaaaaacaaatggctatagcacttgtgactggtggcagtcgcgg < 1:153768‑M2/140‑132 (MQ=255) tcCCCAAAGgggcgagggggaaaagcgtgccaacattgaagattgagccagtttgttagcaatctcaaagatacgtcaacgaattaatttttctcggaaaaacaaatggctatagcacttgtgactggtggcagtcgcgg < 1:240353‑M2/140‑132 (MQ=255) tcCCCAAAGgggcgagggggaaaagcgtgccaacattgaagattgagccagtttgttagcaatctcaaagatacgtcaacgaattaatttttctcggaaaaacaaatggctatagcacttgtgactggtggcagtcgcgg < 1:25138‑M2/140‑132 (MQ=255) tcCCCAAAGgggcgagggggaaaagcgtgccaacattgaagattgagccagtttgttagcaatctcaaagatacgtcaacgaattaatttttctcggaaaaacaaatggctatagcacttgtgactggtggcagtcgcgg < 2:497977‑M2/140‑132 (MQ=255) tcCCCAAAGgggcgagggggaaaagcgtgccaacattgaagattgagccagtttgttagcaatctcaaagatacgtcaacgaattaatttttctcggaaaaacaaatggctatagcacttgtgactggtggcagtcgcgg < 1:319284‑M2/140‑132 (MQ=255) tcCCCAAAGgggcgagggggaaaagcgtgccaacattgaagattgagccagtttgttagcaatctcaaagatacgtcaacgaattaatttttctcggaaaaacaaatggctatagcacttgtgactggtggcagtcgcgg < 1:36336‑M2/140‑132 (MQ=255) tcCCCAAAGgggcgagggggaaaagcgtgccaacattgaagattgagccagtttgttagcaatctcaaagatacgtcaacgaattaatttttctcggaaaaacaaatggctatagcacttgtgactggtggcagtcgcgg < 1:38409‑M2/140‑132 (MQ=255) tcCCCAAAGgggcgagggggaaaagcgtgccaacattgaagattgagccagtttgttagcaatctcaaagatacgtcaacgaattaatttttctcggaaaaacaaatggctatagcacttgtgactggtggcagtcgcgg < 1:438820‑M2/140‑132 (MQ=255) tcCCCAAAGgggcgagggggaaaagcgtgccaacattgaagattgagccagtttgttagcaatctcaaagatacgtcaacgaattaatttttctcggaaaaacaaatggctatagcacttgtgactggtggcagtcgcgg < 1:439233‑M2/140‑132 (MQ=255) tcCCCAAAGgggcgagggggaaaagcgtgccaacattgaagattgagccagtttgttagcaatctcaaagatacgtcaacgaattaatttttctcggaaaaacaaatggctatagcacttgtgactggtggcagtcgcgg < 1:447161‑M2/140‑132 (MQ=255) tcCCCAAAGgggcgagggggaaaagcgtgccaacattgaagattgagccagtttgttagcaatctcaaagatacgtcaacgaattaatttttctcggaaaaacaaatggctatagcacttgtgactggtggcagtcgcgg < 1:96962‑M2/140‑132 (MQ=255) tcCCCAAAGgggcgagggggaaaagcgtgccaacattgaagattgagccagtttgttagcaatctcaaagatacgtcaacgaattaatttttctcggaaaaacaaatggctatagcacttgtgactggtggcagtcgcgg < 1:76761‑M2/140‑132 (MQ=255) tcCCCAAAGgggcgagggggaaaagcgtgccaacattgaagattgagccagtttgttagcaatctcaaagatacgtcaacgaattaatttttctcggaaaaacaaatggctatagcacttgtgactggcgacagtcgcgg < 1:235182‑M2/140‑132 (MQ=255) tcCCCAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAATATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAGCATAACAGGtt > 2:398900/1‑140 (MQ=255) aGgggcgagggggaaaagcgtgccaacattgaagattgagccagtttgttagcaatctcaaagatacgtcaacgaattaatttttctcggaaaaacaaatggctatagcacttgtgactggtggcagtcgcggcatcggg > 1:497977‑M2/1‑2 (MQ=255) | TTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGCTTTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAAATAGTCGAATCAGTGAATTACTGGTATTCGCTAATCGGTACGCAGGAGCAGAACAGGTTACGGTCG > NC_000913/3045939‑3046216 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |