Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	60,788	G→T	A826D (GCT→GAT)	rapA ←	RNA polymerase‑binding ATPase and RNAP recycling factor

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	60,788	0	G	T	100.0%	280.9 / NA	80	A826D (GCT→GAT)	rapA	RNA polymerase‑binding ATPase and RNAP recycling factor
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (36/44);  total (36/44)

CGGTTAACCGCGTTAAGCTGGCGGTTAAAGGTTTCAAACTCTACCTGCGCCGCCAGGTTGTTGCCGTTTTTATCCAGCAGCATACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGAGCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTAACAGTGAAATCGTGCTGCTACCGGTATCGCCAGAAAGGATCAGATCCAGACCGTTGCGGATCAGCGGA  >  NC_000913/60656‑60922                                                                                                                                     |                                                                                                                                       cGGTTAACCGCGTTAAGCTGGCGGTTAAAGGTTTCAAACTCTACCTGCGCCGCCAGGTTGTTGCCGTTTTTATCCAGCAGCATACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGc                                                                                                                                 <  1:959442/140‑1 (MQ=255)    ttAACCGCGTTAAGCTGGCGGTTAAAGGTTTCAAACTCTACCTGCGCCGCCAGGTTGTTGCCGTTTTTATCCAGCAGCATACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTc                                                                                                                              >  2:835284/1‑140 (MQ=255)      aaCCGCGTTAAGCTGGCGGTTAAAGGTTTCAAACTCTACCTGCGCCGCCAGGTTGTTGCCGTTTTTATCCAGCAGCATACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCaa                                                                                                                            <  1:1157438/140‑1 (MQ=255)      aaCCGCGTTAAGCTGGCGGTTAAAGGTTTCAAACTCTACCTGCGCCGCCAGGTTGTTGCCGTTTTTATCCAGCAGCATACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCaa                                                                                                                            <  2:70669/140‑1 (MQ=255)          gcgTTAAGCTGGCGGTTAAAGGTTTCAAACTCTACCTGCGCCGCCAGGTTGTTGCCGTTTTTATCCAGCAGCATACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCaa                                                                                                                            >  2:976020/1‑136 (MQ=255)          gcgTTAAGCTGGCGGTTAAAGGTTTCAAACTCTACCTGCGCCGCCAGGTTGTTGCCGTTTTTATCCAGCAGCATACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCaa                                                                                                                            <  1:976020/136‑1 (MQ=255)              tAAGCTGGCGGTTAAAGGTTTCAAACTCTACCTGCGCCGCCAGGTTGTTGCCGTTTTTATCCAGCAGCATACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACcaca                                                                                                                       <  1:1507379/137‑1 (MQ=255)              tAAGCTGGCGGTTAAAGGTTTCAAACTCTACCTGCGCCGCCAGGTTGTTGCCGTTTTTATCCAGCAGCATACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACcaca                                                                                                                       >  2:1507379/1‑137 (MQ=255)              tAAGCTGGCGGTTAAAGGTTTCAAACTCTACCTGCGCCGCCAGGTTGTTGCCGTTTTTATCCAGCAGCATACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATaa                                                                                                                    >  2:48559/1‑140 (MQ=255)                aGCTGGCGGTTAAAGGTTTCAAACTCTACCTGCGCCGCCAGGTTGTTGCCGTTTTTATCCAGCAGCATACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAAt                                                                                                                  <  1:51541/140‑1 (MQ=255)                  cTGGCGGTTAAAGGTTTCAAACTCTACCTGCGCCGCCAGGTTGTTGCCGTTTTTATCCAGCAGCATACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCa                                                                                                                <  1:1222956/140‑1 (MQ=255)                    ggCGGTTAAAGGTTTCAAACTCTACCTGCGCCGCCAGGTTGTTGCCGTTTTTATCCAGCAGCATACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGt                                                                                                              <  1:959286/140‑1 (MQ=255)                         ttAAAGGTTTCAAACTCTACCTGCGCCGCCAGGTTGTTGCCGTTTTTATCCAGCAGCATACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTccac                                                                                                         <  1:571894/140‑1 (MQ=255)                          tAAAGGTTTCAAACTCTACCTGCGCCGCCAGGTTGTTGCCGTTTTTATCCAGCAGCATACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAGCCACATAAATCAGTTccacc                                                                                                        <  2:2849/140‑1 (MQ=255)                          tAAAGGTTTCAAACTCTACCTGCGCCGCCAGGTTGTTGCCGTTTTTATCCAGCAGCATACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTccacc                                                                                                        <  2:57395/140‑1 (MQ=255)                          tAAAGGTTTCAAACTCTACCTGCGCCGCCAGGTTGTTGCCGTTTTTATCCAGCAGCATACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTccacc                                                                                                        <  1:835284/140‑1 (MQ=255)                          tAAAGGTTTCAAACTCTACCTGCGCCGCCAGGTTGTTGCCGTTTTTATCCAGCAGCATACGTACCGGCGTCGGTGGCAGGAAGCGGGTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTccacc                                                                                                        >  1:470340/1‑140 (MQ=255)                                 ttCAAACTCTACCTGCGCCGCCAGGTTGTTGCCGTTTTTATCCAGCAGCATACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCg                                                                                                 >  2:497854/1‑140 (MQ=255)                                   cAAACTCTACCTGCGCCGCCAGGTTGTTGCCGTTTTTATCCAGCAGCATACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGta                                                                                               >  2:521257/1‑140 (MQ=255)                                         ctACCTGCGCCGCCAGGTTGTTGCCGTTTTTATCCAGCAGCATACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGtacctacc                                                                                         >  2:1405/1‑140 (MQ=255)                                         ctACCTGCGCCGCCAGGGTGTTGCCGTTTTTATCCAGCAGCATACGTACCGGCGTCGGGGGCAGGAAGCGGATGAGCTGCAACGGCTGCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGtacctacc                                                                                         >  2:285903/1‑140 (MQ=255)                                         ctACCTGCGCCGCCAGGCTGTTGCCGTTTTTATCCAGCAGCATACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGtacctacc                                                                                         >  2:382083/1‑140 (MQ=255)                                          tACCTGCGCCGCCAGGTTGTTGCCGTTTTTATCCAGCAGCATACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACa                                                                                                    <  1:115205/128‑1 (MQ=255)                                          tACCTGCGCCGCCAGGTTGTTGCCGTTTTTATCCAGCAGCATACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACa                                                                                                    >  2:115205/1‑128 (MQ=255)                                          tACCTGCGCCGCCAGGTTGTTGCCGTTTTTATCCAGCAGCATACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCg                                                                                        >  2:1501971/1‑140 (MQ=255)                                           aCCTGCGCCGCCAGGTTGTTGCCGTTTTTATCCAGCAGCATACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCgg                                                                                       >  2:1387301/1‑140 (MQ=255)                                           aCCTGCGCCGCCAGGTTGTTGCCGTTTTTATCCAGCAGCATACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCgg                                                                                       >  1:1254507/1‑140 (MQ=255)                                           aCCTGCGCCGCCAGGTTGTTGCCGTTTTTATCCAGCAGCATACGTACCGGCGTCGGTGGCAGGAAGCAGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCgg                                                                                       <  2:1251179/140‑1 (MQ=255)                                             cTGCGCCGCCAGGTTGTTGCCGTTTTTATCCAGCAGCATACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCa                                                                                     <  1:938336/140‑1 (MQ=255)                                              tGCGCCGCCAGGTTGTTGCCGTTTTTATCCAGCAGCATACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCaa                                                                                    >  2:232610/1‑140 (MQ=255)                                              tGCGCCGCCAGGTTGTTGCCGTTTTTATCCAGCAGCATACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCaa                                                                                    >  1:1268654/1‑140 (MQ=255)                                                cgccgcCAGGTTGTTGCCGTTTTTATCCAGCAGCATACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACg                                                                                  >  1:280530/1‑140 (MQ=255)                                                cgccgcCAGGTTGTTGCCGTTTTTATCCAGCAGCATACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACg                                                                                  >  2:1410859/1‑140 (MQ=255)                                                 gccgccAGGTTGTTGCCGTTTTTATCCAGCAGCATACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGc                                                                                 >  1:10103/1‑140 (MQ=255)                                                  ccgccAGGTTGTTGCCGTTTTTATCCAGCAGCATACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCt                                                                                >  1:245282/1‑140 (MQ=255)                                                  ccgccAGGTTGTTGCCGTTTTTATCCAGCAGCATACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCt                                                                                >  1:1497493/1‑140 (MQ=255)                                                   cgccAGGTTGTTGCCGTTTTTATCCAGCAGCATACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCtt                                                                               <  1:181474/140‑1 (MQ=255)                                                   cgccAGGTTGTTGCCGTTTTTATCCAGCAGCATACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCtt                                                                               <  1:382083/140‑1 (MQ=255)                                                   cgccAGGTTGTTGCCGTTTTTATCCAGCAGCATACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCtt                                                                               <  1:48559/140‑1 (MQ=255)                                                   cgccAGGTTGTTGCCGTTTTTATCCAGCAGCATACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCtt                                                                               <  1:126606/140‑1 (MQ=255)                                                           tgttgCCGTTTTTATCCAGCAGCATACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGtttttt                                                                       <  2:10103/140‑1 (MQ=255)                                                            gttgCCGTTTTTATCCAGCAGCATACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTa                                                                      <  1:521257/140‑1 (MQ=255)                                                               gCCGTTTTTATCCAGCAGCATACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTAACa                                                                   >  2:364939/1‑140 (MQ=255)                                                                     tttATCCAGCAGCATACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTAACAGTGaaa                                                             <  1:142355/140‑1 (MQ=255)                                                                              cagcaTACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTAACAGTGAAATCGtgctgc                                                    >  1:66678/1‑140 (MQ=255)                                                                              cagcaTACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTAACAGTGAAATCGtgctgc                                                    >  1:287445/1‑140 (MQ=255)                                                                              cagcaTACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTAACAGTGAAATCGtg                                                        <  1:795531/136‑1 (MQ=255)                                                                              cagcaTACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTAACAGTGAAATCGtg                                                        >  2:795531/1‑136 (MQ=255)                                                                                   tACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTAACAGTGAAATCGTGCTGCTACCg                                               >  2:1302015/1‑140 (MQ=255)                                                                                   tACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTAACAGTGAAATCGTGCTGCTACCg                                               >  2:1617976/1‑140 (MQ=255)                                                                                   tACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTAACAGTGAAATCGTGCTGCTACCg                                               >  1:1096711/1‑140 (MQ=255)                                                                                     cGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTAACAGTGAAATCGTGCTGCTACCGGt                                             <  1:1501971/140‑1 (MQ=255)                                                                                       tACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTAACAGTGAAATCGTGCTGCTACCGGTAt                                           <  2:245282/140‑1 (MQ=255)                                                                                        aCCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTAACAGTGAAATCGTGCTGCTACCGGTATc                                          >  1:595719/1‑140 (MQ=255)                                                                                        aCCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCT‑GGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTAACAGTGAAATCGTGCTGCTACCGGTATCg                                         >  1:1232928/1‑140 (MQ=255)                                                                                          cGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTAACAGTGAAATCGTGCTGCTACCGGTATCGc                                        <  1:1617976/140‑1 (MQ=255)                                                                                           ggCGTCGGTGGCAGGAAGCGGTTGATCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTAACAGTGAAATCGTGCTGCTACCGGTATCGcc                                       >  1:1173840/1‑140 (MQ=255)                                                                                           ggCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTAACAGTGAAATCGTGCTGCTACCGGt                                             >  1:1589504/1‑134 (MQ=255)                                                                                           ggCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTAACAGTGAAATCGTGCTGCTACCGGt                                             <  2:1589504/134‑1 (MQ=255)                                                                                           ggCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTAACAGTGAAATCGTGCTGCTACCGGTATCGcc                                       >  1:1235465/1‑140 (MQ=255)                                                                                           ggCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTAACAGTGAAATCGTGCTGCTACCGGTATCGcc                                       >  2:353690/1‑140 (MQ=255)                                                                                           ggCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTAACAGTGAAATCGTGCTGCTACCGGTATCGcc                                       >  1:677776/1‑140 (MQ=255)                                                                                             cGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTAACAGTGAAATCGTGCTGCTACCGGTATCGCCAg                                     >  1:90331/1‑140 (MQ=255)                                                                                              gTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTAACAGTGAAATCGTGCTGCTACCGGTATCGCCAGa                                    <  2:280530/140‑1 (MQ=255)                                                                                               tCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTAACAGTGAAATCGTGCTGCTACCGGTATCGCCAGaa                                   >  1:381950/1‑140 (MQ=255)                                                                                               tCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTAACAGTGAAATCGTGCTGCTACCGGTATCGCCAGaa                                   >  2:815339/1‑140 (MQ=255)                                                                                               tCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTAACAGTGAAATCGTGCTGCTACCGGTATCGCCAGaa                                   >  1:1354945/1‑140 (MQ=255)                                                                                                cGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTAACAGTGAAATCGTGCTGCTACCGGTATCGCCAGaaa                                  <  2:90331/140‑1 (MQ=255)                                                                                                  gTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTAACAGTGAAATCGTGCTGCTACCGGTATCGCCAGAAAgg                                >  2:1315771/1‑140 (MQ=255)                                                                                                    ggCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTAACAGTGAAATCGTGCTGCTACCGGTATCGCCAGGAAGGAt                              <  2:1096711/140‑1 (MQ=255)                                                                                                    ggCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTAACAGTGAAATCGTGCTGCTACCGGTATCGCCAGAAAGGAt                              <  2:287445/140‑1 (MQ=255)                                                                                                    ggCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTAACAGTGAAATCGTGCTGCTACCGGTATCGCCAGAAAGGAt                              <  2:1354945/140‑1 (MQ=255)                                                                                                    ggCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTAACAGTGAAATCGTGCTGCTACCGGTATCGCCAGAAAGGAt                              <  1:232610/140‑1 (MQ=255)                                                                                                    ggCAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTAACAGTGAAATCGTGCTGCTACCGGTATCGCCAGAAAGGAt                              <  1:364939/140‑1 (MQ=255)                                                                                                      cAGGAAGCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTAACAGTGAAATCGTGCTGCTACCGGTATCGCCAGAAAGGATCa                            <  2:1254507/140‑1 (MQ=255)                                                                                                            gCGGTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTAACAGTGAAATCGTGCTGCTACCGGTATCGCCAGAAAGGATCAGATCCa                      <  1:1448861/140‑1 (MQ=255)                                                                                                              ggTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTAACAGTGAAATCGTGCTGCTACCGGTATCGCCAGAAAGGATCAGATCCAGa                    <  1:871453/140‑1 (MQ=255)                                                                                                               gTTGAGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTAACAGTGAAATCGTGCTGCTACCGGTATCGCCAGAAAGGATCAGATCCAGAc                   <  1:155935/140‑1 (MQ=255)                                                                                                                   aGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTAACAGTGAAATCGTGCTGCTACCGGTATCGCCAGAAAGGATCAGATCCAGACCGtt               <  1:815339/140‑1 (MQ=255)                                                                                                                   aGCTGCAACTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTAACAGTGAAATCGTGCTGCTACCGGTATCGCCAGAAAGGATCAGATCCAGACCGtt               <  1:1387301/140‑1 (MQ=255)                                                                                                                          aCTGCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTAACAGTGAAATCGTGCTGCTACCGGTATCGCCAGAAAGGATCAGATCCAGACCGTTGCGGATc        <  1:631583/140‑1 (MQ=255)                                                                                                                             gCTTCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTAACAGTGAAATCGTGCTGCTACCGGTATCGCCAGAAAGGATCAGATCCAGACCGTTGCGGATCAGc     >  1:1300681/1‑140 (MQ=255)                                                                                                                               ttCGGATCCT‑GGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTAACAGTGAAATCGTGCTGCTACCGGTATCGCCAGAAAGGATCAGATCCAGACCGTTGCGGATCAGCGGa  <  2:1232928/140‑1 (MQ=255)                                                                                                                                tCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTAACAGTGAAATCGTGCTGCTACCGGTATCGCCAGAAAGGATCAGATCCAGACCGTTGCGGATCAGCGGa  <  1:1581198/140‑1 (MQ=255)                                                                                                                                tCGGATCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTAACAGTGAAATCGTGCTGCTACCGGTATCGCCAGAAAGGATCAGATCCAGACCGTTGCGGATCAGCGGa  <  1:1405/140‑1 (MQ=255)                                                                                                                                     |                                                                                                                                       CGGTTAACCGCGTTAAGCTGGCGGTTAAAGGTTTCAAACTCTACCTGCGCCGCCAGGTTGTTGCCGTTTTTATCCAGCAGCATACGTACCGGCGTCGGTGGCAGGAAGCGGTTGAGCTGCAACTGCTTCGGAGCCTGGGCTTCAACCACATAAATCAGTTCCACCAACAGCGTACCTACCGGCAACGCTTTGTTTTTTAACAGTGAAATCGTGCTGCTACCGGTATCGCCAGAAAGGATCAGATCCAGACCGTTGCGGATCAGCGGA  >  NC_000913/60656‑60922

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑