Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	830,388	C→A	A86S (GCG→TCG)	cecR ←	DNA‑binding transcriptional dual regulator CecR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	830,388	0	C	A	100.0%	306.1 / NA	86	A86S (GCG→TCG)	cecR	DNA‑binding transcriptional dual regulator CecR
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (48/38);  total (48/38)

TGCCGTGGGAGAGAGCTGCTCACGGGAGATAAACTTGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTGGGCGCAGGCGAGGTACAAATCTTCTTTCGAACCGAAGTAGTAGGTGATGGCAGCGATATTCTGCCC  >  NC_000913/830251‑830520                                                                                                                                            |                                                                                                                                     tGCCGTGGGAGAGAGCTGCTCACGGGAGATAAACTTGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCgaga                                                                                                                                    >  2:905285/1‑140 (MQ=255) tGCCGTGGGAGAGAGCTGCTCACGGGAGATAAACTTGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCgaga                                                                                                                                    >  2:952993/1‑140 (MQ=255)   ccGTGGGAGAGAGTTGCTTACGTGACATAAACTTGGTGAGGGTGAAGATGACATCCTGGGTGAGCAGCTTATTCCTGTTCCTGCAGGCGCAAA‑‑GGATCTTGTCACGGCTGACAGCCCGATCATGCTACGGATGCGAGAAc                                                                                                                                  >  2:1153945/1‑140 (MQ=255)   ccGTGGGAGAGAGCTGCTCACGGGAGATAAACTTGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAAc                                                                                                                                  >  1:136786/1‑140 (MQ=255)   ccGTGGGAGAGAGCTGCTCACGGGAGATAAACTTGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAAc                                                                                                                                  >  2:1072004/1‑140 (MQ=255)            agagCTGCTCACGGGAGATAAACTTGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCg                                                                                                                         <  2:888368/140‑1 (MQ=255)             gagCTGCTCACGGGAGATAAACTTGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCgg                                                                                                                        <  2:97540/140‑1 (MQ=255)             gagCTGCTCACGGGAGATAAACTTGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCgg                                                                                                                        >  1:128325/1‑140 (MQ=255)             gagCTGCTCACGGGAGATAAACTTGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCgg                                                                                                                        <  1:1364174/140‑1 (MQ=255)             gagCTGCTCACGGGAGATAAACTTGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCgg                                                                                                                        >  2:1153116/1‑140 (MQ=255)             gagCTGCTCACGGGAGATAAACTTGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCgg                                                                                                                        <  1:349230/140‑1 (MQ=255)             gagCTGCTCACGGGAGATAAACTTGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCgg                                                                                                                        >  1:97540/1‑140 (MQ=255)                  gctCACGGGAGATAAACTTGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCgg                                                                                                                        >  2:80713/1‑135 (MQ=255)                  gctCACGGGAGATAAACTTGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCgg                                                                                                                        <  1:80713/135‑1 (MQ=255)                  gctCACGGGAGATAAACTTGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTcc                                                                                                                   >  1:275031/1‑140 (MQ=255)                   ctCACTGGAGATAAACTTGCTGAGGTTGAGGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCt                                                                                                                  >  2:1240894/1‑140 (MQ=255)                   ctCACGGGAGATAAACTTGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCt                                                                                                                  >  2:693589/1‑140 (MQ=255)                   ctCACGGGAGATAAACTTGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCt                                                                                                                  >  2:1484468/1‑140 (MQ=255)                   ctCACGGGAGATAAACTTGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCt                                                                                                                  >  2:399825/1‑140 (MQ=255)                   ctCACGGGAGATAAACTTGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCt                                                                                                                  >  2:619347/1‑140 (MQ=255)                   ctCACGGGAGATAAACTTGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGCTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCt                                                                                                                  >  2:99052/1‑140 (MQ=255)                         ggAGATAAACTTGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCAt                                                                                                            <  1:296338/140‑1 (MQ=255)                             aTAAACTTGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGcgg                                                                                                        >  2:1443837/1‑140 (MQ=255)                              tAAACTTGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGcgga                                                                                                       <  2:1224583/140‑1 (MQ=255)                              tAAACTTGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGcgga                                                                                                       <  2:1240324/140‑1 (MQ=255)                                    tGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAAc                                                                                                 >  1:195258/1‑140 (MQ=255)                                    tGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAAc                                                                                                 >  1:771461/1‑140 (MQ=255)                                    tGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAAc                                                                                                 >  1:1212728/1‑140 (MQ=255)                                    tGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAAc                                                                                                 >  1:946524/1‑140 (MQ=255)                                      cTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTg                                                                                               >  2:256344/1‑140 (MQ=255)                                      cTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTg                                                                                               >  2:1466380/1‑140 (MQ=255)                                         aGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTc                                                                                            <  2:689406/140‑1 (MQ=255)                                           gTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGc                                                                                          >  2:456159/1‑140 (MQ=255)                                           gTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGc                                                                                          >  1:104863/1‑140 (MQ=255)                                             tGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCa                                                                                        <  1:905285/140‑1 (MQ=255)                                                cGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCa                                                                                        <  2:1634884/137‑1 (MQ=255)                                                cGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCa                                                                                        >  1:1634884/1‑137 (MQ=255)                                                   tgtCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATaaaa                                                                                  >  1:1036252/1‑140 (MQ=255)                                                    gtCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAAt                                                                                 <  1:399825/140‑1 (MQ=255)                                                    gtCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAAt                                                                                 <  2:136786/140‑1 (MQ=255)                                                     tCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTc                                                                                            >  2:515541/1‑128 (MQ=255)                                                     tCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTc                                                                                            <  1:515541/128‑1 (MQ=255)                                                        tCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGc                                                                             >  1:12063/1‑140 (MQ=255)                                                           tGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAAt                                                                          >  2:903867/1‑140 (MQ=255)                                                                 agcagcTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTg                                                                    >  2:304176/1‑140 (MQ=255)                                                                   tagcTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTggg                                                                  >  1:1376252/2‑140 (MQ=255)                                                                   cagcTTAATCATGTTCCTGCAGGCGCGAAGGGGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTg                                                                    >  1:934807/1‑140 (MQ=255)                                                                      cTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTGGgcgc                                                               <  2:275031/140‑1 (MQ=255)                                                                      cTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTGGgcgc                                                               >  1:215449/1‑140 (MQ=255)                                                                      cTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTGGgcgc                                                               <  2:128325/140‑1 (MQ=255)                                                                           tCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTGGGCGCAGGCg                                                          <  2:946524/140‑1 (MQ=255)                                                                           tCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTGGGCGCAGGCg                                                          <  2:195258/140‑1 (MQ=255)                                                                            cATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTGGGCGCAGGCGa                                                         <  1:456159/140‑1 (MQ=255)                                                                              tGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTGGGCGCAGGCGAgg                                                       <  1:903867/140‑1 (MQ=255)                                                                                ttCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTGGGCGCAGGCGAGGTa                                                     >  2:805798/1‑140 (MQ=255)                                                                                ttCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTGGGCGCAGGCGAGGTa                                                     >  1:1385057/1‑140 (MQ=255)                                                                                ttCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTGGGCGCAGGCGAGGTa                                                     >  2:957693/1‑140 (MQ=255)                                                                                ttCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTGGGCGCAGGCGAGGTa                                                     >  2:360013/1‑140 (MQ=255)                                                                                   cTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTGGGCGCAGGCGAGGTACaa                                                  >  2:692625/1‑140 (MQ=255)                                                                                      cAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTGGGCGCAGGCGAGGTACAAAtc                                               <  2:690847/140‑1 (MQ=255)                                                                                         gcgcGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTGGGCGCAGGCGAGGTACAAAtcttc                                            >  1:1499366/1‑140 (MQ=255)                                                                                         gcgcGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTGGGCGCAGGCGAGGTACAAAtcttc                                            >  1:54474/1‑140 (MQ=255)                                                                                            cgAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTGGGCGCAGGCGAGGTACAAATCTTCttt                                         <  2:54474/140‑1 (MQ=255)                                                                                              aa‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTGGGCGCAGGCGAGGTACAAATCTTCTTTCg                                       <  1:952993/140‑1 (MQ=255)                                                                                               a‑‑GGATCAGTTCACGGATGTCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTCGGCGCAGGCGAGGTACAAATCTTCTTTCGa                                      <  2:1212728/140‑1 (MQ=255)                                                                                               a‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTGGGCGCAGGCGAGGTACAAATCTTCTTTCGa                                      <  1:1443837/140‑1 (MQ=255)                                                                                                    aTCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTGGGCGCAGGCGAGGTACAAATCTTCTTTCGAAcc                                   <  1:1153945/140‑1 (MQ=255)                                                                                                    aTCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTGGGCGCAGGCGAGGTACAAATCTTCTTTCGAAcc                                   <  1:1484468/140‑1 (MQ=255)                                                                                                    aTCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTGGGCGCAGGCGAGGTACAAATCTTCTTTCGAAcc                                   <  1:256344/140‑1 (MQ=255)                                                                                                    aTCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTGGGCGCAGGCGAGGTACAAATCTTCTTTCGAAcc                                   <  2:934807/140‑1 (MQ=255)                                                                                                     tCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTGGGCGCAGGCGAGGTACAAATCTTCTTTCGAACCg                                  <  1:151319/140‑1 (MQ=255)                                                                                                     tCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTGGGCGCAGGCGAGGTACAAATCTTCTTTCGAACCg                                  <  1:304176/140‑1 (MQ=255)                                                                                                     tCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTGGGCGCAGGCGAGGTACAAATCTTCTTTCGAACCg                                  >  2:1310113/1‑140 (MQ=255)                                                                                                       aGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTGGGCGCAGGCGAGGTACAAATCTTCTTTCGAACCGaa                                >  1:762545/1‑140 (MQ=255)                                                                                                             cGGATGGCAGCCCGATCAGGCTGTGGTTGTGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTGGGCGCAGGCGAGGTACAAATCTTCTTTCGAACCGAAgtagta                          >  1:616797/1‑140 (MQ=255)                                                                                                             cGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTGGGCGCAGGCGAGGTACAAATCTTCTTTCg                                       >  2:990091/1‑127 (MQ=255)                                                                                                             cGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTGGGCGCAGGCGAGGTACAAATCTTCTTTCg                                       <  1:990091/127‑1 (MQ=255)                                                                                                             cGGATGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTGGGCGCAGGCGAGGTACAAATCTTCTTTCGAACCGAAgtagta                          >  1:1005614/1‑140 (MQ=255)                                                                                                                 tGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTGGGCGCAGGCGAGGTACAAATCTTCTTTCGAACCGAAGTAGTAGGTg                      >  2:992251/1‑140 (MQ=255)                                                                                                                 tGGCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTGGGCGCAGGCGAGGTACAAATCTTCTTTCGAACCGAAGTAGTAGGTg                      <  1:360013/140‑1 (MQ=255)                                                                                                                   gCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTGGGCGCAGGCGAGGTACAAATCTTCTTTCGAACCGAAGTAGTAGGTGAt                    >  1:244292/1‑140 (MQ=255)                                                                                                                   gCAGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTGGGCGCAGGCGAGGTACAAATCTTCTTTCGAACCGAAGTAGTAGGTGAt                    >  2:1276854/1‑140 (MQ=255)                                                                                                                     aGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTGGGCGCAGGCGAGGTACAAATCTTCTTTCGAACCGAAGTAGTAGGTGATgg                  <  1:1466380/140‑1 (MQ=255)                                                                                                                     aGCCCGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTGGGCGCAGGCGAGGTACAAATCTTCTTTCGAACCGAAGTAGTAGGTGATgg                  <  2:1036252/140‑1 (MQ=255)                                                                                                                       cccGATCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTGGGCGCAGGCGAGGTACAAATCTTCTTTCGAACCGAAGTAGTAGGTGATGGCa                >  1:731998/1‑140 (MQ=255)                                                                                                                          gATCAGGCTGTGATTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTGGGCGCAGGCGAGGTACAAATCTTCTTTCGAACCGAAGTAGTAGGTGATGGCAGCg             <  2:865415/140‑1 (MQ=255)                                                                                                                            tCAGGCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTGGGCGCAGGCGAGGTACAAATCTTCTTTCGAACCGAAGTAGTAGGTGATGGCAGCGat           >  1:153138/1‑140 (MQ=255)                                                                                                                               ggCTGTGGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTGGGCGCAGGCGAGGTACAAATCTTCTTTCGAACCGAAGTAGTAGGTGATGGCAGCGATAtt        >  2:722699/1‑140 (MQ=255)                                                                                                                                   gtgGTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTGGGCGCAGGCGAGGTACAAATCTTCTTTCGAACCGAAGTAGTAGGTGATGGCAGCGATATTCTGc    <  1:99052/140‑1 (MQ=255)                                                                                                                                     ggTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTGGGCGCAGGCGAGGTACAAATCTTCTTTCGAACCGAAGTAGTAGGTGATGGCAGCGATATTCTGccc  >  2:715226/1‑140 (MQ=255)                                                                                                                                     ggTTGCGAGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTGGGCGCAGGCGAGGTACAAATCTTCTTTCGAACCGAAGTAGTAGGTGATGGCAGCGATATTCTGccc  <  2:1499366/140‑1 (MQ=255)                                                                                                                                            |                                                                                                                                     TGCCGTGGGAGAGAGCTGCTCACGGGAGATAAACTTGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAA‑‑GGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATCCACTGGGCGCAGGCGAGGTACAAATCTTCTTTCGAACCGAAGTAGTAGGTGATGGCAGCGATATTCTGCCC  >  NC_000913/830251‑830520

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑