Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 2,764,916 IS1 (+) +9 bp coding (230‑238/1617 nt) abpA ← CP4‑57 prophage; anti‑bacteriophage protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1979270NA (NA)103 (1.040) 67/276 0.2 100% noncoding (1/768 nt) IS1 repeat region
?NC_000913 = 2764924 0 (0.000)coding (230/1617 nt) abpA CP4‑57 prophage; anti‑bacteriophage protein
* ? NC_000913 2764916 =0 (0.000)109 (1.100) 67/276 0.2 100% coding (238/1617 nt) abpA CP4‑57 prophage; anti‑bacteriophage protein
?NC_000913 = 3584195 NA (NA)noncoding (768/768 nt) IS1 repeat region

Only 100 of 103 total aligned reads displayed.

ATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1979135‑1979270
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTTGGACGTAGGTACTCCATCGTCACAGAGGAAAAGGTCAACAAAACCCTTGAGTACTTGACGAT  <  NC_000913/2764924‑2764786
                                                                                                                                                                                                                                                                                   
ATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGG                                                                                                                                         >  1:1590277/1‑140
ATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGG                                                                                                                                         >  2:458850/1‑140
 TGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAttaa                                                                                                                                        >  2:359694/1‑136
 TGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGT                                                                                                                                        >  2:39475/1‑140
  GTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTG                                                                                                                                       <  1:1661651/140‑1
    CCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCT                                                                                                                                     <  1:1118305/140‑1
    CCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCT                                                                                                                                     <  2:682874/140‑1
     CGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTG                                                                                                                                    >  1:417051/1‑140
     CGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTG                                                                                                                                    >  1:1378332/1‑140
     CGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTG                                                                                                                                    >  2:724671/1‑140
      GGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGA                                                                                                                                   <  2:733444/140‑1
       GCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGAT                                                                                                                                  <  1:1515456/140‑1
         GGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAA                                                                                                                                <  2:358639/140‑1
          GTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAA                                                                                                                               <  2:794788/140‑1
           TGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAA                                                                                                                              <  1:518586/140‑1
           TGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAA                                                                                                                              <  2:1332320/140‑1
              TTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGA                                                                                                                           <  2:792971/140‑1
              TTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGA                                                                                                                           <  2:82951/140‑1
              TTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGA                                                                                                                           <  2:1378332/140‑1
                 TGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGA                                                                                                                        >  1:682331/1‑140
                       TACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCT                                                                                                                  >  1:1243339/1‑140
                                  CCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATT                                                                                                       <  2:763652/140‑1
                                       AGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCA                                                                                                  >  2:1144334/1‑140
                                       AGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCA                                                                                                  <  2:1143423/140‑1
                                        GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCAC                                                                                                 >  2:1632749/1‑140
                                        GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCAC                                                                                                 >  2:772247/1‑140
                                        GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCA                                                                                                  >  1:1558658/1‑139
                                        GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCA                                                                                                  <  2:1558658/139‑1
                                          AGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAA                                                                                               >  1:1075449/1‑140
                                          AGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAA                                                                                               >  1:1222834/1‑140
                                              GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCA                                                                                           >  1:1443667/1‑140
                                               AACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAA                                                                                          <  2:632964/140‑1
                                               AACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAA                                                                                          >  2:546997/1‑140
                                               AACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAA                                                                                          >  1:638809/1‑140
                                                 CAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATG                                                                                        <  1:1632749/140‑1
                                                    GAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAG                                                                                     >  1:936561/1‑140
                                                     AGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGT                                                                                    <  1:772247/140‑1
                                                      GGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTG                                                                                   <  2:682331/140‑1
                                                      GGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTG                                                                                   <  2:1139237/140‑1
                                                      GGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTG                                                                                   >  2:1084766/1‑140
                                                      GGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTG                                                                                   <  2:583539/140‑1
                                                      GGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTG                                                                                   <  1:1144334/140‑1
                                                      GGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTG                                                                                   <  1:39475/140‑1
                                                      GGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTG                                                                                   <  2:1562936/140‑1
                                                       GGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGT                                                                                  <  2:1243339/140‑1
                                                           AGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGT                                                                              <  1:1084766/140‑1
                                                            gccGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTG                                                                                   <  2:1405103/131‑1
                                                            GCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTC                                                                             <  2:1075449/140‑1
                                                            GCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTG                                                                                   <  2:8084/134‑1
                                                            GCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTG                                                                                   >  1:8084/1‑134
                                                            GCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTG                                                                                   >  1:1405103/1‑134
                                                              TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAAGGCAGTGTGAGTCTG                                                                           <  1:458850/140‑1
                                                               GATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGA                                                                          >  2:1083931/1‑140
                                                                       CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCC                                                                  <  1:1143481/140‑1
                                                                       CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCC                                                                  >  2:1162496/1‑140
                                                                        AGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCT                                                                 <  2:417051/140‑1
                                                                          AAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTTG                                                               >  1:1565775/1‑140
                                                                            GCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTTGGA                                                             <  2:204720/140‑1
                                                                             CCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTTGGAC                                                            <  1:546997/140‑1
                                                                             CCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTTGGAC                                                            <  1:484584/140‑1
                                                                               ACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTTGGACGT                                                          <  2:1565775/140‑1
                                                                               ACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTTGGACGT                                                          <  2:1590277/140‑1
                                                                                    AGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCC                                                                  <  1:475595/127‑1
                                                                                    AGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCC                                                                  >  2:475595/1‑127
                                                                                        CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTTGGACGTAGGTACTCC                                                 >  2:1518202/1‑140
                                                                                         CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTTGGACGT                                                          >  2:301738/1‑130
                                                                                         CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTTGGACGT                                                          <  1:301738/130‑1
                                                                                             AAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTTGGACGTAGGTACTCCATCGT                                            <  1:1405188/140‑1
                                                                                              AAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTTGGACGTAGGTACTCCATCGTC                                           >  2:693551/1‑140
                                                                                                 CACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTTGGACGTAGGTACTCCATCGTCACA                                        <  1:1162496/140‑1
                                                                                                  ACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTTGGACGTAGGTACTCCATCGTCACAG                                       <  2:135759/140‑1
                                                                                                   CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTTGGACGTAGGTACTCCATCGTCACAGA                                      >  2:1198422/1‑140
                                                                                                   CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTTGGACGTAGGTACTCCATCGTCACAGA                                      >  1:1472091/1‑140
                                                                                                   CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTTGGACGTAGGTACTCCATCGTCACAGA                                      >  1:501142/1‑140
                                                                                                   CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTTGGACGTAGGTACTCCATCGTCACAGA                                      >  1:1048420/1‑140
                                                                                                   CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTTGGACGTAGGTACTCCAT                                               >  2:191937/1‑131
                                                                                                   CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTTGGACGTAGGTACTCCAT                                               <  1:191937/131‑1
                                                                                                    CATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTTGGACGTAGGTACTCCATCGTCACAGAG                                     >  1:232071/1‑140
                                                                                                          ACACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTTAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTTGGACGTAGGTACTCCATCGTCACAGAGGAAAAG                               <  2:1376625/140‑1
                                                                                                            ACTAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTCGGACGTAGGTACTCCATCGTCACAGAGGAAAAGGc                             >  2:767431/1‑139
                                                                                                              TAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTTGGACGTAGGTACTCCATCGTCACAGAGGAAAAG                               >  1:1254214/1‑136
                                                                                                              TAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTTGGACGTAGGTACTCCATCGTCACAGAGGAAAAG                               <  2:1254214/136‑1
                                                                                                              TAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTTGGACGTAGGTACTCCATCGTCA                                          >  2:612866/1‑125
                                                                                                              TAAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTTGGACGTAGGTACTCCATCGTCA                                          <  1:612866/125‑1
                                                                                                               AAATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTTGGACGTAGGTACTCCATCGTCACAGAGGAAAAGGTCAA                          <  1:1083931/140‑1
                                                                                                                AATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTTGGACGTAGGTACTCCATCGTCACAGAGGAAAAGGTCAAC                         >  2:349079/1‑140
                                                                                                                AATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTTGGACGTAGGTACTCCATCGTCACAGAGGAAAAGGTCAAC                         >  2:1618113/1‑140
                                                                                                                AATCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTTGGACGTAGGTACTCCATCGTCACAGAGGAAAAGGTCAAC                         >  1:717177/1‑140
                                                                                                                  TCAGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTTGGACGTAGGTACTCCATCGTCACAGAGGAAAAGGTCAACAA                       <  2:717177/140‑1
                                                                                                                    AGTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTTGGACGTAGGTACTCCATCGTCACAGAGGAAAAGGTCAACAAAA                     <  2:501142/140‑1
                                                                                                                     GTAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTTGGACGTAGGTACTCCATCGTCACAGAGGAAAAGGTCAACAAAAC                    >  1:1444015/1‑140
                                                                                                                      TAAGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTTGGACGTAGGTACTCCATCGTCACAGAGGAAAAGGTCAACAAAACC                   >  1:214854/1‑140
                                                                                                                        AGTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTTGGACGTAGGTACTCCATCGTCACAGAGGAAAAGGTCAACAAAACCCT                 >  1:1324248/1‑140
                                                                                                                         GTTGGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTTGGACGTAGGTACTCCATCGTCACAGAGGAAAAGGTCAACAAAACCCTT                <  1:724671/140‑1
                                                                                                                            GGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTTGGACGTAGGTACTCCATCGTCACAGAGGAAAAGGTCAACAAAACCCTTGAG             >  2:21660/1‑140
                                                                                                                            GGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTTGGACGTAGGTACTCCATCGTCACAGAGGAAAAGGTCAACAAAACCCTTGAG             >  2:1289652/1‑140
                                                                                                                            GGCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTTGGACGTAGGTACTCCATCGTCACAGAGGAAAAGGTCAACAAAACCCTTGAG             <  1:1618113/140‑1
                                                                                                                             GCAGCATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTTGGACGTAGGTACTCCATCGTCACAGAGGAAAAGGTCAACAAAACCCTTGAGT            <  2:232071/140‑1
                                                                                                                                 CATCACCAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTTGGACGTAGGTACTCCATCGTCACAGAGGAAAAGGTCAACAAAACCCTTGAGTACTT        <  1:1198422/140‑1
                                                                                                                                       CAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTTGGACGTAGGTACTCCATCGTCACAGAGGAAAAGGTCAACAAAACCCTTGAGTACTTGACGAT  <  1:349079/140‑1
                                                                                                                                                                                                                                                                                   
ATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1979135‑1979270
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTTGGACGTAGGTACTCCATCGTCACAGAGGAAAAGGTCAACAAAACCCTTGAGTACTTGACGAT  <  NC_000913/2764924‑2764786

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.