BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	375102 =	NA (NA)	40 (0.520)	13/216	4.0	NA	noncoding (17/36 nt)	other	REP31d
*	?	NC_000913	377351 =	NA (NA)	40 (0.520)	13/216	4.0	NA	noncoding (16/37 nt)	other	REP32a
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 131 total aligned reads displayed.

GCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGC  >  NC_000913/374969‑375241

gCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTc                                                                                                                                        >  2:1431954/1‑140 (MQ=38)

gCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTc                                                                                                                                        >  2:248121/1‑140 (MQ=39)

 cGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCg                                                                                                                                       <  1:248121/140‑1 (MQ=37)

    gagaATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCAt                                                                                                                                    >  1:1039142/1‑140 (MQ=34)

    gagaATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCAt                                                                                                                                    >  2:395121/1‑140 (MQ=35)

               ggTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTgc                                                                                                                         >  1:1334282/1‑140 (MQ=34)

                gTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTgcg                                                                                                                        <  2:1039142/140‑1 (MQ=34)

                  cTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCa                                                                                                                      <  2:548117/140‑1 (MQ=34)

                  cTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCa                                                                                                                      >  2:1642286/1‑140 (MQ=34)

                  acgATAAGACGCGACAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCa                                                                                                                      <  1:85805/138‑1 (MQ=255)

                     aTAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGGACGa                                                                                                                   >  2:1573639/1‑140 (MQ=21)

                     aTAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGa                                                                                                                   >  1:1573600/1‑140 (MQ=34)

                     aTAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGa                                                                                                                   >  2:1510301/1‑140 (MQ=34)

                     aTAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGa                                                                                                                   <  2:1334282/140‑1 (MQ=34)

                          atgcgTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGcc                                                                                                              >  2:1523741/3‑140 (MQ=21)

                          aCGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGcc                                                                                                              >  2:1384322/1‑140 (MQ=34)

                               ttAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATg                                                                                                         >  2:1092733/1‑140 (MQ=34)

                                tAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATgc                                                                                                        <  2:1115129/140‑1 (MQ=34)

                                 aGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATgcg                                                                                                       <  1:1060361/140‑1 (MQ=34)

                                  gCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATgcgg                                                                                                      <  2:393655/140‑1 (MQ=34)

                                  gCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATgcgg                                                                                                      <  1:841105/140‑1 (MQ=34)

                                     tCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGt                                                                                                   >  1:1241389/1‑140 (MQ=34)

                                     tCGCATCAGGCAT‑GGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTg                                                                                                  >  2:769399/1‑140 (MQ=255)

                                       gCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGa                                                                                                 <  2:1233375/140‑1 (MQ=37)

                                       gCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGa                                                                                                 >  1:1208591/1‑140 (MQ=37)

                                        cATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGaa                                                                                                >  1:1152668/1‑140 (MQ=37)

                                           cAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGc                                                                                             <  2:968752/140‑1 (MQ=37)

                                            aGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGcc                                                                                            >  1:968752/1‑140 (MQ=37)

                                               gataatagcACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTa                                                                                         >  1:843640/8‑140 (MQ=255)

                                                aTCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTAt                                                                                        >  2:497289/1‑140 (MQ=37)

                                                aTCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTAt                                                                                        <  1:301961/140‑1 (MQ=37)

                                                 tCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATc                                                                                       <  1:22832/140‑1 (MQ=38)

                                                 tCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATc                                                                                       >  1:1008070/1‑140 (MQ=37)

                                                   tGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCg                                                                                     >  2:803560/1‑140 (MQ=37)

                                                        aCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGCAA‑AGCGTCGCATCAGGCAT‑GGCGCACGACTGCCGGATGCGGCGTg                                                                                                  >  1:119853/1‑122 (MQ=11)

                                                        aCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGTCTa                                                                                >  1:399538/1‑140 (MQ=37)

                                                        aCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTa                                                                                >  1:1192074/1‑140 (MQ=37)

                                                        aCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTa                                                                                >  1:705003/1‑140 (MQ=37)

                                                        aCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCAT‑GGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGTCTAc                                                                               >  1:1344526/1‑140 (MQ=255)

                                                         cGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGTCTAc                                                                               >  1:755674/1‑140 (MQ=37)

                                                         cGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAc                                                                               >  1:415238/1‑140 (MQ=37)

                                                         cGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAc                                                                               >  1:482457/1‑140 (MQ=37)

                                                         cGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAc                                                                               >  1:369717/1‑140 (MQ=37)

                                                          gACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACg                                                                              >  2:1049464/1‑140 (MQ=37)

                                                               ccGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAcacttcg                                                                         <  1:1384322/140‑7 (MQ=255)

                                                                cGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAcacttcgc                                                                        <  2:1192074/140‑8 (MQ=255)

                                                                 ggATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGgcg                                                                       <  1:769399/140‑1 (MQ=40)

                                                                 ggATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGgcg                                                                       <  1:1573639/140‑1 (MQ=40)

                                                                 ggATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGgcg                                                                       <  2:1267070/140‑1 (MQ=40)

                                                                 ggATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGgcg                                                                       <  2:843640/140‑1 (MQ=40)

                                                                 ggATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGgcg                                                                       <  2:460472/140‑1 (MQ=40)

                                                                      cggcgTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCggga                                                                  >  2:1439581/1‑140 (MQ=37)

                                                                      cggcgTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCgaga                                                                  <  1:1049464/140‑1 (MQ=255)

                                                                      cggcgTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCgaga                                                                  <  2:386867/140‑1 (MQ=255)

                                                                      cggcgTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCgaga                                                                  <  2:1208591/140‑1 (MQ=255)

                                                                      cggcgTGAACGACTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCgaga                                                                  <  1:1510301/140‑1 (MQ=255)

                                                                         cgTGAACGCCTTATCCGGTCTACACTTCGC‑CCATAAACCGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCgaga                                                                  <  1:407279/136‑1 (MQ=11)

                                                                           tGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTg                                                             <  2:1247327/140‑1 (MQ=255)

                                                                           tGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTg                                                             <  2:1573600/140‑1 (MQ=255)

                                                                           tGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTg                                                             <  2:1011728/140‑1 (MQ=255)

                                                                             aaCGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTa                                                           >  1:1432354/1‑140 (MQ=37)

                                                                               cGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAgg                                                         <  2:1432354/140‑1 (MQ=255)

                                                                                        cGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAg                                                <  2:705003/140‑1 (MQ=255)

                                                                                        cGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAg                                                <  2:715218/140‑1 (MQ=255)

                                                                                              aCGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑t                                         >  1:52940/1‑140 (MQ=255)

                                                                                               cGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGTGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑tt                                        >  1:170901/1‑140 (MQ=255)

                                                                                               cGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑tt                                        >  2:218494/1‑140 (MQ=255)

                                                                                                     gcgcGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTc                                  >  1:1650946/1‑140 (MQ=40)

                                                                                                         gggAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGCATAGCGTCGCa                               >  1:597391/1‑140 (MQ=255)

                                                                                                          gtaagccgTAGGCCTGATAAGACGCGCAA‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCAt                              >  2:510632/8‑140 (MQ=11)

                                                                                                          gtaagccgTAGGCCTGATAAGACGCGCAA‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCAt                              >  1:1055033/8‑140 (MQ=11)

                                                                                                          gtaagccgTAGGCCTGATAAGACGCGCAA‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCAt                              >  2:685169/8‑140 (MQ=11)

                                                                                                          gtaagccgTAGGCCTGATAAGACGCGCAA‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCAt                              >  2:260130/8‑140 (MQ=11)

                                                                                                          gtaagccgTAGGCCTGATAAGACGCGCAA‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCAt                              >  2:1379620/8‑140 (MQ=11)

                                                                                                          gtaagccgTAGGCCTGATAAGACGCGCAA‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCAt                              >  1:516909/8‑140 (MQ=11)

                                                                                                          gtaagccgTAGGCCTGATAAGACGCGCAA‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCAt                              >  2:1475763/8‑140 (MQ=11)

                                                                                                          gtaagccgTAGGCCTGATAAGACGCGCAA‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCAt                              >  1:1437624/8‑140 (MQ=11)

                                                                                                          gtaagccgTAGGCCTGATAAGACGCGCAA‑AGCGTCGCATCAGGCAT‑GGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATc                             >  1:801780/8‑140 (MQ=11)

                                                                                                          gtaagccgTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATc                             >  2:588084/8‑140 (MQ=255)

                                                                                                          gtaagccgTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATc                             >  2:548457/8‑140 (MQ=255)

                                                                                                          gtaagccgTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATc                             >  1:792778/8‑140 (MQ=255)

                                                                                                          gtaagccgTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATc                             >  1:1116793/8‑140 (MQ=255)

                                                                                                          gtaagccgTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATc                             >  1:1372345/8‑140 (MQ=255)

                                                                                                          gtaagccgTAGGCCTGATAAGACGCG‑CAAAGCGTCGCATCAGGCAT‑GGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATc                             >  2:954008/8‑140 (MQ=11)

                                                                                                           taagccgTAGGCCTGATAAGACGCGCAA‑AGCGTCGCATCAGGCAT‑GGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCG‑TTAGCGTCGCATCa                            >  2:133122/7‑140 (MQ=11)

                                                                                                           taaaccgTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCa                            >  1:1273435/7‑140 (MQ=255)

                                                                                                                   aGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTg                    <  2:1372345/140‑1 (MQ=37)

                                                                                                                   aGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTg                    <  1:588084/140‑1 (MQ=37)

                                                                                                                    ggCCTGATAAGACGCGCAA‑AGCGTCGCATCAGGCAT‑GGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTgc                   <  1:954008/140‑1 (MQ=11)

                                                                                                                     gCCTGATAAGACGCGCAA‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTgc                   <  1:1475763/140‑1 (MQ=255)

                                                                                                                     gCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCCACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑GTAGCGTCGCATCAGGCATCTgcg                  >  2:1532623/1‑140 (MQ=255)

                                                                                                                          aTAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGa             >  1:996401/1‑140 (MQ=34)

                                                                                                                          aTAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGa             <  2:52940/140‑1 (MQ=34)

                                                                                                                          aTAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGa             >  1:1257234/1‑140 (MQ=34)

                                                                                                                               aCGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGcc        >  1:361749/1‑140 (MQ=34)

                                                                                                                               aCGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGcc        >  2:1172916/1‑140 (MQ=34)

                                                                                                                                   g‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGAt    <  1:1523741/140‑1 (MQ=34)

                                                                                                                                   g‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCAT‑GGCGCACGACTGCCGGATg   <  1:218494/140‑1 (MQ=255)

                                                                                                                                     tt‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGCAGTTATAAGCCTGATAAGAGGCG‑TTAGAGTCACATCAGGCATCTGCGCACGACTGCCGGATg   >  2:950836/1‑140 (MQ=11)

                                                                                                                                     tt‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATg   <  1:132531/140‑1 (MQ=34)

GCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGC  >  NC_000913/374969‑375241

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.