New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 375203 =NA (NA)30 (0.390) 18/216 2.9 NA noncoding (17/36 nt) other REP31f
?NC_000913 377351 = NA (NA)noncoding (16/37 nt) other REP32a

Only 100 of 159 total aligned reads displayed.

GCCAGCAGTATAGTGTTGCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAG  >  NC_000913/377213‑377486
                                                                                                                                          |                                                                                                                                        
gCCAGCAGTATAGTGTTGCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATg                                                                                                                                         <  1:7177/140‑1 (MQ=255)
atccggcagtcgtgtgcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccatccgtaggccggataaggcgtttacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaTg                                                                                                                                         >  2:251199‑M2/139‑140 (MQ=255)
 tccggcagtcgtgtgcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccatccgtaggccggataaggcgtttacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaTgc                                                                                                                                        >  2:356291‑M2/138‑140 (MQ=255)
 ccAGCAGTATAGTGTTGCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATgc                                                                                                                                        <  2:423494/140‑1 (MQ=255)
  cagcagTATAGTGTTGCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATgcg                                                                                                                                       <  2:1363632/140‑1 (MQ=255)
         ataGTGTTGCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTAACGCGTCTTAt                                                                                                                               >  2:1554183/1‑140 (MQ=255)
          taGTGTTGCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTAt                                                                                                                               <  1:1539290/140‑1 (MQ=255)
          taGTGTTGCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTAt                                                                                                                               <  1:1088393/140‑1 (MQ=255)
          taGTGTTGCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTAt                                                                                                                               <  2:896000/140‑1 (MQ=255)
               ttGCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAACCATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGt                                                                                                                                    <  2:138341/130‑1 (MQ=255)
               ttGCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAACCATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGt                                                                                                                                    >  1:138341/1‑130 (MQ=255)
               ttGCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAgac                                                                                                                          >  2:778945/1‑138 (MQ=255)
               ttGCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGc                                                                                                                          >  2:40356/1‑140 (MQ=255)
               ttGCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGc                                                                                                                          >  2:1119075/1‑140 (MQ=255)
               ttGCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTAACGCGTCTTATCAGGcc                                                                                                                         >  1:1474897/1‑140 (MQ=255)
               ttGCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTAACGCGTCTTATCAGGcc                                                                                                                         >  1:971750/1‑140 (MQ=255)
                  cacaGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTa                                                                                                                       >  1:777341/1‑140 (MQ=255)
                  cacaGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTa                                                                                                                       >  1:844677/1‑140 (MQ=255)
                  cacaGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTa                                                                                                                       <  2:357926/140‑1 (MQ=255)
                       cgcgcTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGtt                                                                                                                  >  2:1458752/1‑140 (MQ=255)
                       cgcgcTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGtt                                                                                                                  >  1:502777/1‑140 (MQ=255)
                       cgcgcTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGtt                                                                                                                  >  1:1346615/1‑140 (MQ=255)
                         gatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccatccgtaggccggataaggcgtttacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaTGCGCGTCTTATCAGGCCTACGGTTTa                                                                                                                <  1:362462‑M2/27‑1 (MQ=255)
                         gatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccatccgtaggccggataaggcgtttacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaTGCGCGTCTTATCAGGCCTACGGTTTa                                                                                                                <  1:1288638‑M2/27‑1 (MQ=255)
                          atgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccatccgtaggccggataaggcgtttacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaTGCGCGTCTTATCAGGCCTACGGTTTAt                                                                                                               <  2:982749‑M2/28‑1 (MQ=255)
                               gcgcCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCg                                                                                                          <  2:876667/140‑1 (MQ=255)
                               gcgcCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCg                                                                                                          <  1:1314646/140‑1 (MQ=255)
                               gcgcCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCg                                                                                                          <  2:27561/140‑1 (MQ=255)
                                            ttatcaggcctacaaattcccgcgccatccgtaggccggataaggcgtttacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgcttTGCGCGTCTTATCAGGCCTACGGCTtac                                                                                                               >  1:1551032‑M2/95‑121 (MQ=255)
                                            ttatcaggcctacaaattcccgcgccatccgtaggccggataaggcgtttacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgcttTGCGCGTCTTATCAGGCCTACGGCTtac                                                                                                               <  1:869464‑M2/28‑2 (MQ=255)
                                            ttatcaggcctacaaattcccgcgccatccgtaggccggataaggcgtttacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgcttTGCGCGTCTTATCAGGCCTACGGCTtac                                                                                                               >  2:869464‑M2/95‑121 (MQ=255)
                                                  aGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAgg                                                                                       >  1:764354/1‑140 (MQ=255)
                                                       acCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTc                                                                                  >  1:884980/1‑140 (MQ=255)
                                                        cccGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGAcc                                                                                               <  1:476369/126‑1 (MQ=255)
                                                        cccGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGAcc                                                                                               >  2:476369/1‑126 (MQ=255)
                                                             tcccgcgccatccgtaggccggataaggcgtttacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaTGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCAcgccg                                                                            >  2:512214‑M2/78‑140 (MQ=255)
                                                              tGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCAcgccgc                                                                           >  2:1039903/1‑140 (MQ=255)
                                                              tGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCAcgccgc                                                                           >  1:214381/1‑140 (MQ=255)
                                                               gCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCa                                                                          <  2:1346615/140‑1 (MQ=255)
                                                                  cgccatccgtaggccggataaggcgtttacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaTGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATcc                                                                       >  1:1495285‑M2/73‑140 (MQ=255)
                                                                  cgccatccgtaggccggataaggcgtttacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaTGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATcc                                                                       >  1:342054‑M2/73‑140 (MQ=255)
                                                                   gccatccgtaggccggataaggcgtttacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaTGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCg                                                                      >  1:1340670‑M2/72‑140 (MQ=255)
                                                                   aCTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCg                                                                      >  1:933938/1‑140 (MQ=255)
                                                                   aCTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCg                                                                      >  1:1567271/1‑140 (MQ=255)
                                                                    cTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCgg                                                                     <  2:884980/140‑1 (MQ=255)
                                                                         aaGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTc                                                                <  2:1314252/140‑1 (MQ=255)
                                                                         aaGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTc                                                                <  1:1000747/140‑1 (MQ=255)
                                                                         aaGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGGTTCACGCCGCATCCGGCAGTCg                                                               <  1:250530/140‑1 (MQ=255)
                                                                          gtaggccggataaggcgtttacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaTGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCg                                                               <  2:1340670‑M2/76‑1 (MQ=255)
                                                                          aGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCg                                                               <  1:1458752/140‑1 (MQ=255)
                                                                          aGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCg                                                               <  1:197090/140‑1 (MQ=255)
                                                                          aGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCg                                                               <  2:1288497/140‑1 (MQ=255)
                                                                          aGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGAAGTCg                                                               <  1:587700/140‑1 (MQ=255)
                                                                           gTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGt                                                              <  1:1119075/140‑1 (MQ=255)
                                                                              ccTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTgcg                                                           >  2:615237/1‑140 (MQ=255)
                                                                               cTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCgg                                                                     >  1:880114/1‑129 (MQ=255)
                                                                               cTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCgg                                                                     <  2:880114/129‑1 (MQ=255)
                                                                                tgatgaTTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGcc                                                        <  1:40356/140‑1 (MQ=255)
                                                                                  atgatTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCAt                                                      >  1:946004/1‑140 (MQ=255)
                                                                                        tGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGa                                                >  2:939793/1‑140 (MQ=255)
                                                                                        tGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGa                                                >  1:1011249/1‑140 (MQ=255)
                                                                                           tttacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaTGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGc                                             <  2:1565357‑M2/93‑1 (MQ=255)
                                                                                            ttacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaTGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCg                                            <  2:280670‑M2/94‑1 (MQ=255)
                                                                                              ggTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCAGATGCCTGATGCGa                                           <  1:1300996/140‑1 (MQ=255)
                                                                                                   cgcatccggcagtcgtgcgccatgcctgatgcgacgctaTGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCttt                                     >  2:138417‑M2/40‑140 (MQ=255)
                                                                                                    cATAGATAAGTCGTGCGCAGATCCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTg                                    >  1:1356670/1‑140 (MQ=255)
                                                                                                       aGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTgcgc                                 <  2:844677/140‑1 (MQ=255)
                                                                                                         aTAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGt                               <  1:615237/140‑1 (MQ=255)
                                                                                                              tcgtgcgcagatgcctgatgtgacgctaTGCGCGTCTTATCAGGCCTACGGCTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCAGATGCGACGCTTTGCGCGTCTTAt                          >  1:270203‑M2/29‑140 (MQ=255)
                                                                                                              tcgtgcgcagatgcctgatgcgacgctaTGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTAt                          >  2:1655898‑M2/29‑140 (MQ=255)
                                                                                                              tcgtgcgcagatgcctgatgcgacgctaTGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTAt                          >  2:677204‑M2/29‑140 (MQ=255)
                                                                                                              tcgtgcgcagatgcctgatgcgacgctaTGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTAt                          >  1:1624328‑M2/29‑140 (MQ=255)
                                                                                                              tcgtgcgcagatgcctgatgcgacgctaTGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTAt                          >  1:251739‑M2/29‑140 (MQ=255)
                                                                                                              tcgtgcgcagatgcctgatgcgacgctaTGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTACACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTAt                          <  2:1470091‑M2/112‑1 (MQ=255)
                                                                                                              tcgtgcgcagatgcctgatgcgacgctaTGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTACACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTAt                          >  1:1470091‑M2/29‑140 (MQ=255)
                                                                                                              tcgtgcgcagatgcctgatgcgacgctaTGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTgcgc                                 >  2:1437831‑M2/29‑132 (MQ=255)
                                                                                                              tcgtgcgcagatgcctgatgcgacgctaTGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTgcgc                                 <  1:1437831‑M2/104‑1 (MQ=255)
                                                                                                               cgtgcgcagatgcctaatgcgacgctaTGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATc                         >  1:1503000‑M2/28‑140 (MQ=255)
                                                                                                                 tgcgcagatgcctgatgcgacgctaTGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGt                               <  1:65808‑M2/107‑1 (MQ=255)
                                                                                                                 tgcgcagatgcctgatgcgacgctaTGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGt                               >  2:65808‑M2/26‑132 (MQ=255)
                                                                                                                 tgcgcagatgcctgatgcgacgctaTGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAg                       >  1:582421‑M2/26‑140 (MQ=255)
                                                                                                                 tgcgcagatgcctgatgcgacgctaTGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAg                       >  1:1607964‑M2/26‑140 (MQ=255)
                                                                                                                 tgcgcagatgcctgatgcgacgctaTGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAg                       >  2:1219138‑M2/26‑140 (MQ=255)
                                                                                                                  gcgcagatgcctgatgcgacgctaTGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAgg                      >  1:1409313‑M2/25‑140 (MQ=255)
                                                                                                                   cgcagatgcctgatgcgacgctaTGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATc                         <  1:1263278‑M2/113‑1 (MQ=255)
                                                                                                                   cgcAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCAGATGCCTGATGCGACGCTAACGCGTCTTATCAGGc                     <  2:1649731/140‑1 (MQ=14)
                                                                                                                    gcagatgcctgatgcgacgctaTGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGcc                    <  1:1039903‑M2/118‑1 (MQ=255)
                                                                                                                             tgatgcgacgctaTGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTa           <  2:582421‑M2/127‑1 (MQ=255)
                                                                                                                             tgatgcgacgctaTGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTa           <  1:1655898‑M2/127‑1 (MQ=255)
                                                                                                                             tGATGCGACGCTAACGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTAc          <  2:232337/140‑1 (MQ=255)
                                                                                                                              gatgcgacgctaTGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTAc          <  2:777341‑M2/128‑1 (MQ=255)
                                                                                                                              gatgcgacgctaTGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTAc          <  2:1011249‑M2/128‑1 (MQ=255)
                                                                                                                              gatgcgacgctaTGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTAc          <  1:482630‑M2/128‑1 (MQ=255)
                                                                                                                              gatgcgacgctaTGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTAc          <  2:1495285‑M2/128‑1 (MQ=255)
                                                                                                                                tgcgacgctaTGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACgg        <  2:1607964‑M2/130‑1 (MQ=255)
                                                                                                                                    acgctaTGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCg                                                               >  1:224938‑M2/7‑82 (MQ=255)
                                                                                                                                    acgctaTGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCg                                                               <  2:224938‑M2/76‑1 (MQ=255)
                                                                                                                                    acgctaTGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCg     <  1:1001613‑M2/133‑1 (MQ=255)
                                                                                                                                    acgctaTGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGCGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCg     >  2:1001613‑M2/7‑139 (MQ=255)
                                                                                                                                     cgctaTGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGaa   <  2:151081‑M2/135‑1 (MQ=255)
                                                                                                                                          |                                                                                                                                        
GCCAGCAGTATAGTGTTGCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAG  >  NC_000913/377213‑377486

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.