| Read alignment evidence... | |||||||||||
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| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,628,649 | 0 | A | C | 22.9% | 139.0 / 14.0 | 61 | intergenic (+102/+206) | nadR/ettA | DNA‑binding transcriptional repressor/NMN adenylyltransferase NadR/energy‑dependent translational throttle protein EttA |
| Reads supporting (aligned to +/- strand): ref base A (39/8); new base C (0/14); total (39/22) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.42e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GGTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACA > NC_000913/4628517‑4628788 | ggTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCAc < 2:295114/140‑1 (MQ=255) gTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACg > 2:619260/1‑140 (MQ=255) gCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACggg > 2:872477/1‑140 (MQ=255) ggAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGCATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGa > 1:779489/1‑140 (MQ=255) agaTGAGGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGAcc < 1:619260/140‑1 (MQ=255) tgatgGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGc > 2:1609813/1‑140 (MQ=255) tgGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAACCCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAC‑CCTGCACGGGTGACCCGCCAc < 2:580264/140‑1 (MQ=255) gggggAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTAAAAAAC‑CCTGCACGGGTGACCCGCCACg < 2:193517/140‑1 (MQ=255) aGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAAtt > 1:1253595/1‑140 (MQ=255) gaagagATACCCGTGATGAAACTGCTCAAAGGCGAGATAAAAAATGAGTTTTTTTGATGGGTTGAAACCCTCTCGGGAAGGGGCTGTCGAGTTTAAACAGGGTTTGAAAAAA‑CCTGCACGGGTGCCCCGCCACGAAATTg < 2:1180134/138‑1 (MQ=255) cAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGa > 1:1032915/1‑140 (MQ=255) agagATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAC‑CCTGCACGGGTGACCCGCCACGAAATTGAg < 1:1378078/140‑1 (MQ=255) tAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAACC‑CCTGCACGGGTGCCCCGCCACGAAATTGAGGATGc < 1:553835/140‑1 (MQ=255) acccGTGATGAACCTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAACCCTCTCTGGAAGAGGCTGTCGAGATAAAACAAGGTTTAAAAAAC‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCt < 1:1258732/138‑1 (MQ=255) aCCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTa > 2:1506620/1‑140 (MQ=255) ccGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAACCCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAC‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTaa < 1:1363101/140‑1 (MQ=255) gatgaAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCt > 2:1324620/1‑140 (MQ=255) atgaAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCtg > 1:1360266/1‑140 (MQ=255) tgaAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCtgt > 2:1228730/1‑140 (MQ=255) cTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAg > 2:1101426/1‑140 (MQ=255) cTGCTAAAGGGCGAGGTATAAAATGATTTTTTTTGATGAGTTAAAACCCTCTCTGGAAGAGGCTGTCGAGATAAAAAAAGGTTTGAAAAAC‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAg < 1:1010942/140‑1 (MQ=255) tGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGa > 1:30420/1‑140 (MQ=255) cTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGAcc > 1:1519193/1‑140 (MQ=255) tCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCg > 1:968370/1‑140 (MQ=255) aaaGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGAAAGAGGCTGCAGAGATTAAACAAGGTTTAAAAAAC‑CCTGCGCGGGTCACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGa < 1:1228730/140‑1 (MQ=255) aGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGaaa > 2:1182916/1‑140 (MQ=255) aGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGaaa < 1:1506620/140‑1 (MQ=255) gacagggTAAAAAATGATTTTTTTTGATGAGTTGAAACCCTCTCGGGAAGGGGCTGTCGAGATAAAACAAGGTTTAAAAAAC‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAAc < 2:1638738/135‑1 (MQ=255) aaagAGGTATAAAATGATTTTTTTTGATGAGTAAAAACCCGCTCTGGAAGAGGCTGTCAAGATAAAACAAGGTTTAAAAAAC‑CCTCCGCGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAAc < 2:245754/137‑1 (MQ=255) ggAGGTATAAAATGATTTTTTTTGATGAGTTAAAACCCTCTCTGGAAGGGGCTGTCGAGATAAAACAAGTTTTAAAAAAC‑CCGGCGGGGGTGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACgg < 2:1305786/139‑1 (MQ=255) aGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAg < 1:1546908/127‑1 (MQ=255) aGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAg > 2:1546908/1‑127 (MQ=255) aaaaaaaaTGTTTTTTTTTGAGGAGTAAAAACCCTCTGTGGAAGAGGCTGTCAAAATAAAACAAGGTTAAAAAAAC‑CCGGCCGGGGTGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGtt < 2:418318/136‑1 (MQ=255) tGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCAcgccgc > 2:207528/1‑140 (MQ=255) tGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCAcgccgc > 2:859285/1‑140 (MQ=255) gAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCAcgcctgt > 1:245754/1‑137 (MQ=255) attttttttGATGAGTTAAAACCCTCTCGGGAAGAGGCTGTCGAGATAAAACAGGGTTTAAAAAAC‑CCGGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCAt < 2:1360266/138‑1 (MQ=255) aGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCAcgcctgtc > 1:1638738/1‑136 (MQ=255) aGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCAt > 1:346486/1‑140 (MQ=255) gTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATc > 1:1342299/1‑140 (MQ=255) gTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATc > 1:418318/1‑140 (MQ=255) tttGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCa > 1:744602/1‑140 (MQ=255) tgatgaTTTAAAACCCTCTCGGGAAGAGGCTGTCAAAATAAAAAAAGTTTTAAAAAAC‑CCTGCCGGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCAtt < 2:30420/140‑1 (MQ=255) atgaGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCg < 1:872477/140‑1 (MQ=255) ggaGTTAAAACCCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGTTTTAAAAAAC‑CCTGCAGGGGTGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCgg < 1:1324620/139‑1 (MQ=255) aGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTg < 1:1609813/140‑1 (MQ=255) ttGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCt > 1:954282/1‑140 (MQ=255) ttGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCt > 1:1661379/1‑140 (MQ=255) tGAAACCCTCTCGGGAAGGGGCTGTCGAGATAAAACAAGGTTTAAAAAAC‑CCTGCAGGGGTGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTc < 1:670596/140‑1 (MQ=255) ccTCTGGGGAAGAGGCTGTCGA‑AATAAAAAAGGTTTTAAAAAACCCTGCGGGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGcc < 2:1253595/140‑1 (MQ=255) ccTCTCGGGAAGAGGCTGTGGAGATAAAAAAGGGTTTAAAAAAA‑CCTGCAGGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGcc < 2:968370/140‑1 (MQ=255) ctctGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGa > 1:829777/1‑140 (MQ=255) ctctGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCACGATGCCTGa > 1:801115/1‑140 (MQ=255) gAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGa > 1:636965/1‑140 (MQ=255) gagGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGc > 2:992040/1‑140 (MQ=255) gCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTa > 1:1608818/1‑140 (MQ=255) ttGTCGAGATAAAACAAGTTTTAAAAAAC‑CCTGCCGGGGTGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTAc < 2:632773/139‑1 (MQ=38) cTGTCGAGATAAAAAAGGGTTAAAAAAAC‑CCTGCAGGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTAc < 2:346486/140‑1 (MQ=38) tGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTAcc > 1:632773/1‑140 (MQ=255) tGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTATAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTAcc > 2:382480/1‑140 (MQ=255) tCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACcgc > 1:978815/1‑140 (MQ=255) aaaaaaAGTTTAAAAAAACCCTGCGGGGGGGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTAt < 2:1661379/140‑1 (MQ=37) aaCAGGTTTTAAAAAAC‑CCTCCGGGGGTGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCa < 2:1032915/140‑1 (MQ=37) aCAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAg > 2:1616920/1‑140 (MQ=255) ggTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCt > 1:1525149/1‑140 (MQ=255) ggTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCt > 1:152005/1‑140 (MQ=255) ttttAAAAAAC‑CCTGCAGGGGTGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTa < 2:978815/139‑1 (MQ=255) tttaaaaaaac‑CCTCCCGGGGTGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTa < 2:1519193/135‑1 (MQ=37) gTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTa > 2:724473/1‑140 (MQ=255) gTTTAAAAAAC‑CCTGCAGGGGTGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTa < 1:1101426/140‑1 (MQ=255) ttaaaaaaac‑CCTGCAGGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTAc < 2:935805/136‑1 (MQ=255) ttGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACa > 1:1465713/1‑140 (MQ=255) a‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACa < 1:1616920/140‑1 (MQ=255) a‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTATAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACa < 1:382480/140‑1 (MQ=255) | GGTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACA > NC_000913/4628517‑4628788 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |