BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,435,379	G→T	L81M (CTG→ATG)	uspF ←	nucleotide binding filament protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,435,379	0	G	T	100.0%	445.2 / NA	125	L81M (CTG→ATG)	uspF	nucleotide binding filament protein
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (65/60); total (65/60)

Only 100 of 126 total aligned reads displayed.

GAGCAGATAAGTGGTGATATCCGGTCGATGGGAAGCAATGATGATCATATGAGCGGGGATCTTCTTCGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCAGTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTAAACCCAGAGAGGCATAGTAGGGCAGTGAAGGTATTACCGTCAGGAAATG  >  NC_000913/1435245‑1435514

gAGCAGATAAGTGGTGATATCCGGTCGATGGGAAGCAATGATGATCATATGAGCGGGGATCTTCTTCGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTaa                                                                                                                                    >  1:20019/1‑140 (MQ=255)

     gATAAGTGGTGATATCCGGTCGATGGGAAGCAATGATGATCATATGAGCGGGGATCTTCTTCGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAAtttt                                                                                                                               <  2:167019/140‑1 (MQ=255)

           tggtgATATCCGGTCGATGGGAAGCAATGATGATCATATGAGCGGGGATCTTCTTCGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATg                                                                                                                         >  1:757416/1‑140 (MQ=255)

             gtgATATCCGGTCGATGGGAAGCAATGATGATCATATGAGCGGGGATCTTCTTCGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGAt                                                                                                                       >  2:313154/1‑140 (MQ=255)

              tgATATCCGGTCGATGGGAAGCAATGATGATCATATGAGCGGGGATCTTCTTCGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGAtc                                                                                                                      <  2:822085/140‑1 (MQ=255)

               gATATCCGGTCGATGGGAAGCAATGATGATCATATGAGCGGGGATCTTCTTCGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGAtct                                                                                                                     >  1:1029259/1‑140 (MQ=255)

                atatCCGGTCGATGGGAAGCAATGATGATCATATGAGCGGGGATCTTCTTCGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGTCATTTTAAATTTTTTAATGAtctc                                                                                                                    >  1:1307579/1‑140 (MQ=255)

                atatCCGGTCGATGGGAAGCAATGATGATCATATGAGCGGGGATCTTCTTCGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGAtctc                                                                                                                    >  2:1140609/1‑140 (MQ=255)

                atatCCGGTCGATGGGAAGCAATGATGATCATATGAGCGGGGATCTTCTTCGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGAtctc                                                                                                                    >  2:159980/1‑140 (MQ=255)

                        tCGATGGGAAGCAATGATGATCATATGAGCGGGGATCTTCTTCGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGtt                                                                                                            >  2:1055678/1‑140 (MQ=255)

                                    aaTGATGATCATATGAGCGGGGATCTTCTTCGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCtt                                                                                                <  1:498655/140‑1 (MQ=255)

                                      tgatgaTCATATGAGCGGGGATCTTCTTCGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTcc                                                                                              >  1:241005/1‑140 (MQ=255)

                                          gatCATATGAGCGGGGATCTTCTTCGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCtt                                                                                          <  1:522607/140‑1 (MQ=255)

                                          gatCATATGAGCGGGGATCTTCTTCGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCtt                                                                                          >  2:1672966/1‑140 (MQ=255)

                                           atCATATGAGCGGGGATCTTCTTCGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCt                                                                                           <  2:629226/138‑1 (MQ=255)

                                           atCATATGAGCGGGGATCTTCTTCGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCt                                                                                           >  1:629226/1‑138 (MQ=255)

                                            tCATATGAGCGGGGATCTTCTTCGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTc                                                                                        <  1:1055678/140‑1 (MQ=255)

                                               tatGAGCGGGGATCTTCTTCGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCt                                                                                           <  1:1006448/134‑1 (MQ=255)

                                               tatGAGCGGGGATCTTCTTCGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAgg                                                                                     >  1:475123/1‑140 (MQ=255)

                                                atGAGCGGGGATCTTCTTCGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGt                                                                                    >  1:460939/1‑140 (MQ=255)

                                                atGAGCGGGGATCTTCTTCGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGt                                                                                    >  2:564476/1‑140 (MQ=255)

                                                atGAGCGGGGATCTTCTTCGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGt                                                                                    >  2:677873/1‑140 (MQ=255)

                                                atGAGCGGGGATCTTCTTCGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGt                                                                                    >  2:1662517/1‑140 (MQ=255)

                                                   aGCGGGGATCTTCTTCGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCAt                                                                                 >  2:1591915/1‑140 (MQ=255)

                                                     cGGGGATCTTCTTCGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCttt                                                                                         >  2:601768/1‑130 (MQ=255)

                                                     cGGGGATCTTCTTCGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCttt                                                                                         <  1:601768/130‑1 (MQ=255)

                                                     cGGGGATCTTCTTCGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTc                                                                                        >  2:1097857/1‑131 (MQ=255)

                                                     cGGGGATCTTCTTCGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTc                                                                                        <  1:859595/131‑1 (MQ=255)

                                                     cGGGGATCTTCTTCGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATcc                                                                               >  1:1367697/1‑140 (MQ=255)

                                                     cGGGGATCCTCTTCGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATcc                                                                               >  1:271295/1‑140 (MQ=255)

                                                       gggATCTTCTTCGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCAt                                                                             >  2:509777/1‑140 (MQ=255)

                                                       gggATCTTCTTCGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCAt                                                                             >  1:1158063/1‑140 (MQ=255)

                                                       gggATCTTCTTCGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCAt                                                                             >  2:83300/1‑140 (MQ=255)

                                                       gggATCTTCTTCGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCAt                                                                             >  2:128343/1‑140 (MQ=255)

                                                       gggATCTTCTTCGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCAt                                                                             >  1:337153/1‑140 (MQ=255)

                                                        ggATCTTCTTCGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCAtt                                                                            <  1:987776/140‑1 (MQ=255)

                                                        ggATCTTCTTCGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCAtt                                                                            >  2:1229515/1‑140 (MQ=255)

                                                          aTCTTCTTCGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGc                                                                          >  2:92284/1‑140 (MQ=255)

                                                             ttcttcGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCttt                                                                                         >  2:273547/1‑122 (MQ=255)

                                                             ttcttcGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCgg                                                                       >  2:76386/1‑140 (MQ=255)

                                                               cttcGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTa                                                                     <  1:159980/140‑1 (MQ=255)

                                                                  cGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAAtt                                                                  <  1:1662517/140‑1 (MQ=255)

                                                                  cGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAAtt                                                                  >  1:523840/1‑140 (MQ=255)

                                                                  cGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAAtt                                                                  >  2:1206298/1‑140 (MQ=255)

                                                                   gCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCAtt                                                                            <  2:1659879/129‑1 (MQ=255)

                                                                   gCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCAtt                                                                            >  1:1659879/1‑129 (MQ=255)

                                                                    ccAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCt                                                                >  1:342351/1‑140 (MQ=255)

                                                                         tCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGa                                                           <  2:460939/140‑1 (MQ=255)

                                                                               aTGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGa                                                           >  2:970625/1‑134 (MQ=255)

                                                                               aTGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGa                                                           <  1:970625/134‑1 (MQ=255)

                                                                               aTGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGc                                                     <  1:611547/140‑1 (MQ=255)

                                                                               aTGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGc                                                     <  1:1413853/140‑1 (MQ=255)

                                                                                tGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCt                                                    <  1:416760/140‑1 (MQ=255)

                                                                                tGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCt                                                    <  2:634476/140‑1 (MQ=255)

                                                                                  cGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTaa                                                  >  1:510732/1‑140 (MQ=255)

                                                                                  cGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTaa                                                  >  2:1548198/1‑140 (MQ=255)

                                                                                   ggTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTaaa                                                 >  2:1420666/1‑140 (MQ=255)

                                                                                   ggTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTaaa                                                 >  2:745964/1‑140 (MQ=255)

                                                                                    gTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTAAAc                                                <  2:271295/140‑1 (MQ=255)

                                                                                     tCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTAAAcc                                               <  1:1672966/140‑1 (MQ=255)

                                                                                     tCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTAAAcc                                               <  1:1420343/140‑1 (MQ=255)

                                                                                        ttGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTAAACCCag                                            >  2:668512/1‑140 (MQ=255)

                                                                                        ttGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTAAACCCag                                            <  1:677873/140‑1 (MQ=255)

                                                                                        ttGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTAAACCCag                                            <  2:357207/140‑1 (MQ=255)

                                                                                        ttGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTAAACCCag                                            <  1:1140609/140‑1 (MQ=255)

                                                                                         tGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTAAACCCaga                                           >  1:320066/1‑140 (MQ=255)

                                                                                          gggCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTAAACCCagag                                          <  1:1437520/140‑1 (MQ=255)

                                                                                          gggCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTAAACCCagag                                          <  2:1441026/140‑1 (MQ=255)

                                                                                             cGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTAAACCCAGAGAgg                                       <  1:1591915/140‑1 (MQ=255)

                                                                                             cGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTAAACCCAGAGAgg                                       <  1:608990/140‑1 (MQ=255)

                                                                                               aGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTAAACCCAGAGAGGCa                                     <  1:1007700/140‑1 (MQ=255)

                                                                                               aGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTAAACCCAGAGAGGCa                                     >  1:1183925/1‑140 (MQ=255)

                                                                                               aGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTAAACCCAGAGAGGCa                                     >  1:299656/1‑140 (MQ=255)

                                                                                                 ccTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGCTTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTAAACCCa                                             >  2:826330/1‑130 (MQ=255)

                                                                                                 ccTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTAAACCCa                                             <  1:826330/130‑1 (MQ=255)

                                                                                                 ccTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTAAACCCAGAGAGGCAta                                   >  2:1527972/1‑140 (MQ=255)

                                                                                                 ccTTCCTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTAAACCCAGAGAGGCAta                                   >  2:1004924/1‑140 (MQ=255)

                                                                                                     ccTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTAAACCCAGAGAGGCAtagtag                               <  2:1029259/140‑1 (MQ=255)

                                                                                                     ccTCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTAAACCCAGAGAGGCAtagtag                               >  1:1640748/1‑140 (MQ=255)

                                                                                                       tCAACATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTAAACCCAGAGAGGCATAGTAggg                             <  2:1183925/140‑1 (MQ=255)

                                                                                                           cATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTAAACCCAGAGAGGCAtag                                  <  2:977779/131‑1 (MQ=255)

                                                                                                           cATGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTAAACCCAGAGAGGCAtag                                  >  1:977779/1‑131 (MQ=255)

                                                                                                            aTGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTAAACCCAGAGAGGCATAGTAGGGCAGTg                        <  1:668512/140‑1 (MQ=255)

                                                                                                             tGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTAAACCCAGAGAGGCATAGTAGGGCAGTGa                       <  1:128343/140‑1 (MQ=255)

                                                                                                             tGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTAAACCCAGAGAGGCATAGTAGGGCAGTGa                       <  2:20019/140‑1 (MQ=255)

                                                                                                             tGGACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTAAACCCAGAGAGGCATAGTAGGGCAGTGa                       <  2:337153/140‑1 (MQ=255)

                                                                                                              ggACATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTAAACCCAGAGAGGCATAGTAGGGCAGTGaa                      >  1:1322948/1‑140 (MQ=255)

                                                                                                                aCATGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTAAACCCAGAGAGGCATAGTAGGGCAGTGAAgg                    >  2:156166/1‑140 (MQ=255)

                                                                                                                   tGCACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTAAACCCAGAGAGGCATAGTAGGGCAGTGAAGGTAt                 >  2:512891/1‑140 (MQ=255)

                                                                                                                     cACTCTGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTAAACCCAGAGAGGCATAGTAGGGCAGTGAAGGTATTa               >  1:74385/1‑140 (MQ=255)

                                                                                                                          tGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTAAACCCAGAGAGGCATAGTAGGGCAGTGAAGGTa                  <  2:652806/132‑1 (MQ=255)

                                                                                                                          tGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTAAACCCAGAGAGGCATAGTAGGGCAGTGAAGGTa                  >  1:652806/1‑132 (MQ=255)

                                                                                                                          tGTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTAAACCCAGAGAGGCATAGTAGGGCAGTGAAGGTATTACCGTc          >  1:1122377/1‑140 (MQ=255)

                                                                                                                           gTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTAAACCCAGAGAGGCATAGTAGGGCAGTGAATGTATTACCGTCa         <  1:1548198/140‑1 (MQ=255)

                                                                                                                           gTCGGTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTAAACCCAGAGAGGCATAGTAGGGCAGTGAAGGTATTACCGTCa         <  1:512891/140‑1 (MQ=255)

                                                                                                                              ggTTGGCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTAAACCCAGAGAGGCATAGTAGGGCAGTGAAGGTATTACCGTCAGGa      >  2:1396687/1‑140 (MQ=255)

                                                                                                                                  ggCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTAAACCCAGAGAGGCATAGTAGGGCAGTGAAGGTATTACCGTCAGGAAATg  <  2:320066/140‑1 (MQ=255)

                                                                                                                                  ggCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTAAACCCAGAGAGGCATAGTAGGGCAGTGAAGGTATTACCGTCAGGAAATg  >  1:157106/1‑140 (MQ=255)

                                                                                                                                  ggCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTAAACCCAGAGAGGCATAGTAGGGCAGTGAAGGTATTACCGTCAGGAAATg  <  1:1420666/140‑1 (MQ=255)

                                                                                                                                  ggCATTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTAAACCCAGAGAGGCATAGTAGGGCAGTGAAGGTATTACCGTCAGGAAATg  <  2:510732/140‑1 (MQ=255)

GAGCAGATAAGTGGTGATATCCGGTCGATGGGAAGCAATGATGATCATATGAGCGGGGATCTTCTTCGCCAATTCCAGAATGCGGTCTTTGGGCGAGCCTTCCTCAACATGGACATGCACTCTGTCGGTTGGCAGTTTAAATTTTTTAATGATCTCTTCCAGTTGCGATTTGGCTTCCGCTTTCAGGTCATCCATTGCCGGTAATTCTGCGGAATACGCTAAACCCAGAGAGGCATAGTAGGGCAGTGAAGGTATTACCGTCAGGAAATG  >  NC_000913/1435245‑1435514

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`