BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,545,548	G→T	S56* (TCA→TAA)	yddK ←	leucine‑rich repeat domain‑containing protein YddK

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,545,548	0	G	T	100.0%	371.0 / NA	103	S56* (TCA→TAA)	yddK	leucine‑rich repeat domain‑containing protein YddK
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (61/42); total (61/42)

Only 100 of 108 total aligned reads displayed.

TGGTTAAATTAAGTCCTGATAAATCAATGGTCACTTCATTAGTGTCATCAATTATATTTCTTACTGCAGTCCAGTACTGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTGATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTGGCGTTTAAATGTGCAATATGGTTGTCGTTTAAAGTGATTGTTTTCATCCTGG  >  NC_000913/1545411‑1545683

tGGTTAAATTAAGTCCTGATAAATCAATGGTCACTTCATTAGTGTCATCAATTATATTTCTTACTGCAGTCCAGTACTGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTttat                                                                                                                                       >  1:445165/1‑140 (MQ=255)

 ggTTAAATTAAGTCCTGATAAATCAATGGTCACTTCATTAGTGTCATCAATTATATTTCTTACTGCAGTCCAGTACTGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTttatg                                                                                                                                      >  2:433005/1‑140 (MQ=255)

  gTTAAATTAAGTCCTGATAAATCAATGGTCACTTCATTAGTGTCATCAATTATATTTCTTACTGCAGTCCAGTACTGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTttatga                                                                                                                                     >  1:493086/1‑140 (MQ=255)

   ttAAATTAAGTCCTGATAAATCAATGGTCACTTCATTAGTGTCATCAATTATATTTCTTACTGCAGTCCAGTACTGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTtatgat                                                                                                                                    <  1:750313/140‑1 (MQ=255)

   ttAAATTAAGTCCTGATAAATCAATGGTCACTTCATTAGTGTCATCAATTATATTTCTTACTGCAGTCCAGTACTGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTtatgat                                                                                                                                    <  2:615418/140‑1 (MQ=255)

        ttAAGTCCTGATAAATCAATGGTCACTTCATTAGTGTCATCAATTATATTTCTTACTGCAGTCCAGTACTGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAg                                                                                                                               >  2:5809/1‑140 (MQ=255)

            gTCCTGATAAATCAATGGTCACTTCATTAGTGTCATCAATTATATTTCTTACTGCAGTCCAGTACTGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGa                                                                                                                           >  1:789868/1‑140 (MQ=255)

             tCCTGATAAATCAATGGTCACTTCATTAGTGTCATCAATTATATTTCTTACTGCAGTCCAGTACTGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGAt                                                                                                                          >  1:711190/1‑140 (MQ=255)

             tCCTGATAAATCAATGGTCACTTCATTAGTGTCATCAATTATATTTCTTACTGCAGTCCAGTACTGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGAt                                                                                                                          >  2:1351683/1‑140 (MQ=255)

              ccTGATAAATCAATGGTCACTTCATTAGTGTCATCAATTATATTTCTTACTGCAGTCCAGTACTGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATc                                                                                                                         <  2:789868/140‑1 (MQ=255)

              ccTGATAAATCAATGGTCACTTCATTAGTGTCATCAATTATATTTCTTACTGCAGTCCAGTACTGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATc                                                                                                                         <  2:1555851/140‑1 (MQ=255)

               cTGATAAATCAATGGTCACTTCATTAGTGTCATCAATTATATTTCTTACTGCAGTCCAGTACTGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCa                                                                                                                        <  1:1451194/140‑1 (MQ=255)

                tGATAAATCAATGGTCACTTCATTAGTGTCATCAATTATATTTCTTACTGCAGTCCAGTACTGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCaa                                                                                                                       >  2:327962/1‑140 (MQ=255)

                 gATAAATCAATGGTCACTTCATTAGTGTCATCAATTATATTTCTTACTGCAGTCCAGTACTGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAAt                                                                                                                      >  1:552352/1‑140 (MQ=255)

                  aTAAATCAATGGTCACTTCATTAGTGTCATCAATTATATTTCTTACTGCAGTCCAGTACTGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATg                                                                                                                     >  1:294609/1‑140 (MQ=255)

                       tCAATGGTCACTTCATTAGTGTCATCAATTATATTTCTTACTGCAGTCCAGTACTGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCAtt                                                                                                                >  1:1103629/1‑140 (MQ=255)

                            ggTCACTTCATTAGTGTCATCAATTATATTTCTTACTGCAGTCCAGTACTGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCAttggttg                                                                                                           >  1:1300548/1‑140 (MQ=255)

                             gTCACTTCATTAGTGTCATCAATTATATTTCTTACTGCAGTCCAGTACTGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCAttggttgg                                                                                                          <  1:689290/140‑1 (MQ=255)

                                  ttCATTAGTGTCATCAATTATATTTCTTACTGCAGTCCAGTACTGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTa                                                                                                     >  1:1361283/1‑140 (MQ=255)

                                         gtgtCATCAATTATATTTCTTACTGCAGTCCAGTACTGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGtt                                                                                              <  2:542781/140‑1 (MQ=255)

                                          tgtCATCAATTATATTTCTTACTGCAGTCCAGTACTGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAg                                                                                                       <  2:1269589/130‑1 (MQ=255)

                                          tgtCATCAATTATATTTCTTACTGCAGTCCAGTACTGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAg                                                                                                       >  1:1269589/1‑130 (MQ=255)

                                          tgtCATCAATTATATTTCTTACTGCAGTCCAGTACTGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTa                                                                                             <  2:445165/140‑1 (MQ=255)

                                              atcaATTATATTTCTTACTGCAGTCCAGTACTGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTgt                                                                                         >  2:365492/1‑139 (MQ=255)

                                              atcaATTATATTTCTTACTGCAGTCCAGTACTGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGc                                                                                         >  2:754900/1‑140 (MQ=255)

                                              atcaATTATATTTCTTACTGCAGTCCAGTACTGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGc                                                                                         >  1:1039672/1‑140 (MQ=255)

                                               tcaATTATATTTCTTACTGCAGTCCAGTACTGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCt                                                                                        <  1:998221/140‑1 (MQ=255)

                                               tcaATTATATTTCTTACTGCAGTCCAGTACTGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCt                                                                                        <  2:552352/140‑1 (MQ=255)

                                               tcaATTATATTTCTTACTGCAGTCCAGTACTGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCt                                                                                        >  1:1033437/1‑140 (MQ=255)

                                                  aTTATATTTCTTACTGCAGTCCAGTACTGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCt                                                                                        >  1:501290/1‑137 (MQ=255)

                                                  aTTATATTTCTTACTGCAGTCCAGTACTGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCt                                                                                        <  2:501290/137‑1 (MQ=255)

                                                      tatTTCTTACTGCAGTCCAGTACTGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGttt                                                                                 <  2:946753/140‑1 (MQ=255)

                                                             tACTGCAGTCCAGTACTGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTaaaattt                                                                          >  1:636216/1‑136 (MQ=255)

                                                             tACTGCAGTCCAGTACTGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATAtt                                                                          >  2:1424126/1‑140 (MQ=255)

                                                              aCTGCAGTCCAGTACTGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTc                                                                         <  2:1300548/140‑1 (MQ=255)

                                                              aCTGCAGTCCAGTACTGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTc                                                                         <  2:711190/140‑1 (MQ=255)

                                                                tGCAGTCCAGTACTGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCa                                                                       <  2:493086/140‑1 (MQ=255)

                                                                  cAGTCCAGTACTGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGt                                                                     >  1:1259469/1‑140 (MQ=255)

                                                                     tCCAGTACTGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGtttt                                                                  >  2:1596685/1‑140 (MQ=255)

                                                                       cAGTACTGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGt                                                                >  1:240834/1‑140 (MQ=255)

                                                                        aGTACTGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTa                                                               <  2:1259469/140‑1 (MQ=255)

                                                                          tACTGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAgt                                                             >  1:1550239/1‑140 (MQ=255)

                                                                            cTGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAgtgt                                                           >  1:997111/1‑140 (MQ=255)

                                                                             tGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGtt                                                          >  1:475789/1‑140 (MQ=255)

                                                                               cATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGtttt                                                        <  2:997111/140‑1 (MQ=255)

                                                                               cATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGtttt                                                        >  1:1488910/1‑140 (MQ=255)

                                                                               cATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGtttt                                                        <  2:326247/140‑1 (MQ=255)

                                                                               cATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGtttt                                                        >  2:1668758/1‑140 (MQ=255)

                                                                               cATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGtttt                                                        >  2:1231483/1‑140 (MQ=255)

                                                                               cATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGtttt                                                        >  1:636141/1‑140 (MQ=255)

                                                                                 tttGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTg                                                      <  1:1351683/140‑1 (MQ=255)

                                                                                 tttGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTg                                                      >  2:1585391/1‑140 (MQ=255)

                                                                                 tttGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAATAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTg                                                      <  2:306335/140‑1 (MQ=255)

                                                                                   tgtgCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTGGc                                                    >  1:706063/1‑140 (MQ=255)

                                                                                    gtgCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGtt                                                                    <  2:983731/123‑1 (MQ=255)

                                                                                    gtgCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTg                                                      <  2:291352/137‑1 (MQ=255)

                                                                                    gtgCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTg                                                      >  1:291352/1‑137 (MQ=255)

                                                                                    gtgCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTGGCg                                                   >  2:1347695/1‑140 (MQ=255)

                                                                                    gtgCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTGGCg                                                   <  1:1487298/140‑1 (MQ=255)

                                                                                    gtgCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTGGCg                                                   >  1:1031992/1‑140 (MQ=255)

                                                                                       cAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTGGCGttt                                                >  2:1477908/1‑140 (MQ=255)

                                                                                         aGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTGGCGTTTaa                                              <  1:773608/140‑1 (MQ=255)

                                                                                         aGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTGGCGTTTaa                                              <  2:1550239/140‑1 (MQ=255)

                                                                                         aGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTGGCGTTTaa                                              <  1:433005/140‑1 (MQ=255)

                                                                                         aGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTGGCGTTTaa                                              <  2:512779/140‑1 (MQ=255)

                                                                                            ggATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTGGCGTTTAAAtg                                           >  1:797385/1‑140 (MQ=255)

                                                                                              aTCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTGGCGTTTAAAtgtg                                         <  2:706063/140‑1 (MQ=255)

                                                                                              aTCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTGGCGTTTAAAtgtg                                         >  2:1644959/1‑140 (MQ=255)

                                                                                                   tgttgATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTGGCGTTTAAATGTGCAata                                    <  1:1347695/140‑1 (MQ=255)

                                                                                                   tgttgATGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTGGCGTTTAAATGTGCAata                                    <  1:1469942/140‑1 (MQ=255)

                                                                                                        aTGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTGGCGTTTAAATGTGCAATATGGtt                               <  1:1644959/140‑1 (MQ=255)

                                                                                                         tGCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTGGCGTTTAAATGTGCAATATGGTTg                              <  2:1031992/140‑1 (MQ=255)

                                                                                                          gCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTGGCGTTTAAAt                                            >  2:1497204/1‑125 (MQ=255)

                                                                                                          gCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTGGCGTTTAAAt                                            <  1:1497204/125‑1 (MQ=255)

                                                                                                          gCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTGGCGTTTAAATGTGCAATATGGTTGt                             >  2:727374/1‑140 (MQ=255)

                                                                                                          gCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTGGCGTTTAAATGTGCAATATGGTTGt                             >  1:563938/1‑140 (MQ=255)

                                                                                                          gCCGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTGGCGTTTAAATGTGCAATATGGTTGt                             >  1:1276746/1‑140 (MQ=255)

                                                                                                            cGTTAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAG‑TTAAATATTCCAGTTTTGTAGTGTTTTTGGCGTTTAAATGTGCAATATGGTTGTCGt                          >  2:777363/1‑140 (MQ=255)

                                                                                                               tAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTGGCGTTTAAATGTGCAATATGGTTGTCGttt                        >  1:317382/1‑140 (MQ=255)

                                                                                                               tAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTGGCGTTTAAATGTGCAATATGGTTGTCGttt                        >  1:1650676/1‑140 (MQ=255)

                                                                                                               tAACTAATACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTGGCGTTTAAATGTGCAATATGGTTGTCGttt                        >  1:329774/1‑140 (MQ=255)

                                                                                                                      tACATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTGGCGTTTAAATGTGCAATATGGTTGTCGTTTAAAGTGa                 >  2:759823/1‑140 (MQ=255)

                                                                                                                       aCATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTGGCGTTTAAATGTGCAATATGGTTGTCGTTTAAAGTGAt                <  1:727374/140‑1 (MQ=255)

                                                                                                                       aCATGCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAAATTTCCAGTTTTGTAGTGTTTTTGGCGTTTAAATGTGCAATATGGTTGTCGTTTAAAGTGAt                <  2:636216/140‑1 (MQ=255)

                                                                                                                           gCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTGGCGTTTAAATGTGCAATATGGTTGTCGTTTAAAGTGATTg              <  2:63780/138‑1 (MQ=255)

                                                                                                                           gCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTGGCGTTTAAATGTGCAATATGGTTGTCGTTTAAAGTGATTGtt            >  2:917006/1‑140 (MQ=255)

                                                                                                                           gCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTGGCGTTTAAATGTGCAATATGGTTGTCGTTTAAAGTGATTGtt            >  1:482225/1‑140 (MQ=255)

                                                                                                                           gCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTGGCGTTTAAATGTGCAATATGGTTGTCGTTTAAAGTGATTGtt            <  1:530247/140‑1 (MQ=255)

                                                                                                                           gCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTGGCGTTTAAATGTGCAATATGGTTGTCGTTTAAAGTGATTGtt            >  2:1451514/1‑140 (MQ=255)

                                                                                                                           gCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTGGCGTTTAAATGTGCAATATGGTTGTCGTTTAAAGTGATTGtt            >  2:510381/1‑140 (MQ=255)

                                                                                                                           gCCAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTGGCGTTTAAATGTGCAATATGGTTGTCGTTTAAAGTGATTGtt            >  1:189599/1‑140 (MQ=255)

                                                                                                                            ccAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTGGCGTTTAAATGTGCAATATGGTTGTCGTTTAAAGTGATTGttt           >  2:1212844/1‑140 (MQ=255)

                                                                                                                            ccAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTGGCGTTTAAATGTGCAATATGGTTGTCGTTTAAAGTGATTGttt           >  1:926434/1‑140 (MQ=255)

                                                                                                                            ccAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTGGCGTTTAAATGTGCAATATGGTTGTCGTTTAAAGTGATTGttt           <  1:1596685/140‑1 (MQ=255)

                                                                                                                            ccAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTGGCGTTTAAATGTGCAATATGGTTGTCGTTTAAAGTGATTGttt           <  1:953008/140‑1 (MQ=255)

                                                                                                                            ccAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTG‑TTTTGGCGTTTAAATGTGCAATATGGTTGTCGTTTAAAGTGATTGtttt          >  2:846946/1‑140 (MQ=255)

                                                                                                                             cAAAGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTGGCGTTTAAATGTGCAATATGGTTGTCGTTTAAAGTGATTGtttt          >  1:664159/1‑140 (MQ=255)

                                                                                                                              aaaGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTGGCGTTTAAATGTGCAATATGGTTGTCGTTTAAAGTGATTGTTTTc         <  1:917006/140‑1 (MQ=255)

                                                                                                                                aGATGTTTTTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTGGCGTTTAAATGTGCAATATGGTTGTCGTTTAAAGTGATTGTTTTCAt       <  2:1033437/140‑1 (MQ=255)

                                                                                                                                     ttttTATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTGGCGTTTAAATGTGCAATATGGTTGTCGTTTAAAGTGATTGTTTTCATCCTgg  >  1:1095677/1‑140 (MQ=255)

TGGTTAAATTAAGTCCTGATAAATCAATGGTCACTTCATTAGTGTCATCAATTATATTTCTTACTGCAGTCCAGTACTGCATTTGTGCAAGTGGATCATTGTTGATGCCGTTAACTAATACATGCCAAAGATGTTTTGATGATATTAGTTGATCAATGTCATTGGTTGGCAGTAAATTGTTATTGCTTAAGTTTAAATATTCCAGTTTTGTAGTGTTTTTGGCGTTTAAATGTGCAATATGGTTGTCGTTTAAAGTGATTGTTTTCATCCTGG  >  NC_000913/1545411‑1545683

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`