Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,604,3440CT39.0% 88.4 / 55.5 82S62F (TCT→TTT) bglJDNA‑binding transcriptional regulator BglJ
Reads supporting (aligned to +/- strand):  ref base C (7/43);  new base T (32/0);  total (39/43)
Fisher's exact test for biased strand distribution p-value = 2.59e-16
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 101 total aligned reads displayed.

ATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTC‑TGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCA  >  NC_000913/4604207‑4604483
                                                                                                                                         |                                                                                                                                            
aTGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATtttttttt                                                                                                                                            >  2:210486/1‑140 (MQ=255)
aTGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATtttttttt                                                                                                                                            >  1:152987/1‑140 (MQ=255)
aTGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATtttttttt                                                                                                                                            >  2:132886/1‑140 (MQ=255)
  gCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATtttttctttt                                                                                                                                          >  1:911414/1‑140 (MQ=255)
   cGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATtttttcttttt                                                                                                                                         <  2:1194870/140‑1 (MQ=255)
   cGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATtttttcttttt                                                                                                                                         <  2:1319490/140‑1 (MQ=255)
     tCATGAGTAGTATCGTTATTGAGAGTTTATTCAGAAAGTTTGCGGATAACCCTTCTAAGCTCCATACCTATCCCACTCAGGATTCATTTCAGGATGCCATGTCGCGGATTGCGTTTTCGGCGGTCATCttttctctttc‑t                                                                                                                                      <  2:1224361/140‑1 (MQ=255)
     tCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTttttctttttc‑t                                                                                                                                      <  2:460309/140‑1 (MQ=255)
     tCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTttttctttttc‑t                                                                                                                                      <  2:717392/140‑1 (MQ=255)
     tCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTttttctttttc‑t                                                                                                                                      <  1:414037/140‑1 (MQ=255)
      cATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAttttttttttttttt                                                                                                                                      >  2:1255228/1‑137 (MQ=255)
       aTGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATtttttcttttt                                                                                                                                         >  1:360737/1‑136 (MQ=255)
       aTGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATtttttcttttt                                                                                                                                         <  2:360737/136‑1 (MQ=255)
       aTGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTC‑TGc                                                                                                                                    <  1:1255228/140‑1 (MQ=255)
             agtaTCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAtttttttttttt                                                                                                                                         >  1:747235/1‑130 (MQ=255)
             agtaTCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATtttttcttttt                                                                                                                                         <  2:747235/130‑1 (MQ=255)
                aTCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTC‑TGCCATGAGAAg                                                                                                                           <  2:820742/140‑1 (MQ=255)
                aTCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTC‑TGCCATGAGAAg                                                                                                                           <  1:562573/140‑1 (MQ=255)
                 tCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTC‑TGCCATGAGAAGt                                                                                                                          <  1:327897/140‑1 (MQ=255)
                    gTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTT‑TGCCCTGAGAAGTGAg                                                                                                                       >  1:938390/1‑140 (MQ=255)
                    gTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTC‑TGCCATGAGAAGTGAg                                                                                                                       >  2:900963/1‑140 (MQ=255)
                      aTTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTC‑TGCCATGAGAAGTg                                                                                                                         >  1:279697/1‑136 (MQ=255)
                      aTTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTC‑TGCCATGAGAAGTg                                                                                                                         <  2:279697/136‑1 (MQ=255)
                      aTTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTC‑TGCCATGAGAAGTGAgcg                                                                                                                     <  2:139674/140‑1 (MQ=255)
                      aTTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTC‑TGCCATGAGAAGTGAgcg                                                                                                                     <  1:849781/140‑1 (MQ=255)
                        tGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTC‑TGCCATGAGAAGTGAGCGCa                                                                                                                   <  1:1310632/140‑1 (MQ=255)
                         gagaGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTT‑TTCCCTGAGAAGTGAgggcgg                                                                                                                  >  2:1580912/1‑138 (MQ=255)
                         gagaGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTT‑TTCCATGAGAAGTGAGCGCag                                                                                                                  >  2:1278739/1‑140 (MQ=255)
                         gagaGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTT‑TTCCATGAGAAGGGAGCGCag                                                                                                                  >  1:229111/1‑140 (MQ=255)
                          agagTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTT‑TTCCCTGAGAAGGGAGCGCcga                                                                                                                 >  1:887113/1‑140 (MQ=255)
                          agagTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTC‑TGCCATGAGAAGTGAGCGCaga                                                                                                                 <  2:911414/140‑1 (MQ=255)
                          agagTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGCCATTTTTTGTTTTTCTTGCCA‑GAGGAATGAGGGCagg                                                                                                                 >  1:914010/1‑139 (MQ=255)
                             gTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTC‑TGCCATGAGAAGTGAGCGCagagag                                                                                                              >  1:929742/1‑140 (MQ=255)
                             gTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTC‑TGCCATGAGAAGTGAGCGCagagag                                                                                                              <  1:707846/140‑1 (MQ=255)
                               ttATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTT‑TTCCCTGAGAAGTGAGGGCAGAGAggg                                                                                                            >  2:707846/1‑140 (MQ=255)
                               ttATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTT‑TTCCATGAGAAGTGAGGGCAGgggggg                                                                                                            >  2:252945/1‑140 (MQ=255)
                               ttATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTT‑TTCCATGAGAAGAGGGGGCagggaggg                                                                                                            >  2:1579893/1‑140 (MQ=255)
                               ttATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTC‑TGCCATGAGAAGTGAGCGCAGAGAggg                                                                                                            <  1:132886/140‑1 (MQ=255)
                               ttATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTC‑TGCCATGAGAAGTGAGCGCAGAGAggg                                                                                                            <  1:252945/140‑1 (MQ=255)
                               ttATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTC‑TGCCATGAGAAGTGAGCGCAGAGAggg                                                                                                            <  1:210486/140‑1 (MQ=255)
                               ttATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTC‑TGCCATGAGAAGTGAGCGCAGAGAggg                                                                                                            <  1:997261/140‑1 (MQ=255)
                                tATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCCTTTTTTCTTTTTT‑TTTCATAAGAAGGGAGCGCAgggaggga                                                                                                           >  2:592621/1‑140 (MQ=255)
                                tATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTC‑TGCCATGAGAAGTGAGCGCAGAGAGGGa                                                                                                           <  2:844118/140‑1 (MQ=255)
                                tATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTC‑TGCCATGAGAAGTGAGCGCAGAGAGGGa                                                                                                           <  2:395297/140‑1 (MQ=255)
                                            ttGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTT‑TGCCATGAGAAGGGAGCGCAGAGGGGGGTTATCTTTCctt                                                                                               >  2:1286629/1‑139 (MQ=255)
                                                   tAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTC‑TGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAAc                                                                                        <  1:625820/140‑1 (MQ=255)
                                                   tAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTC‑TGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAAc                                                                                        <  2:1240624/140‑1 (MQ=255)
                                                       ccTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTT‑TTCCCTGAGAAAGGGGAGCAGAGAGGGAGTTTTTTTCCTGACTGAACTggg                                                                                    >  2:799849/1‑139 (MQ=255)
                                                               ccTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGTGGTCATTTTTTCTTTTTC‑TGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGGCTGACTGAACTGGCGATTAAGt                                                                            <  2:619312/139‑1 (MQ=255)
                                                                cTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTT‑TTCCATGAGAAGGGAGCGCAGAGAGGGGTTATCTTTCCTGACTGAACTGGCGATTAAGtt                                                                           >  2:1502144/1‑140 (MQ=255)
                                                                 tCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTT‑TGCCATGAGAAGTGAGCGGAGAGAGGGGTTTTTTTTCCTGACTGAACTGGCGATTAAGttt                                                                          >  2:1156555/1‑140 (MQ=255)
                                                                 tCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTC‑TTCCATGAGAAGTGAGCGCAGGGAGGGGTTATCTTGCCTGACTGAACTGGCGGTTAAGttt                                                                          >  2:1431645/1‑140 (MQ=255)
                                                                   cATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTT‑TGCCATGAGAAGTGAGCGCAGAGAGGGGTTATCTTGCCTGACTGAACTGGCGATTAAGTTTcc                                                                        >  2:547443/1‑140 (MQ=255)
                                                                    aTACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTC‑TGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCcg                                                                       <  1:1156555/140‑1 (MQ=255)
                                                                     tACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTT‑TTCCCTGAGAAGTGAGGGGAGAGAGGGGTTATCTTTCCTGACTGAACTGGGGGTTAAAttttccc                                                                      >  2:1213685/1‑136 (MQ=255)
                                                                     tACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTT‑TGCCATGAGAAGGGAGCGCAGAGAGGGGTTTTCTTTCCTGACTGAAATGGCGATTAAGTTTTcgc                                                                      >  2:1082928/1‑140 (MQ=255)
                                                                         tataCCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTC‑TGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTAc                                                                  <  1:1538598/140‑1 (MQ=255)
                                                                          ataCCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTC‑TGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTAcc                                                                 <  1:1213685/140‑1 (MQ=255)
                                                                          ataCCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTC‑TGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTAcc                                                                 <  1:1082928/140‑1 (MQ=255)
                                                                             ccAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTC‑TGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCgg                                                              <  1:767139/140‑1 (MQ=255)
                                                                                gTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTT‑TTCCCTTAGAAGGGGGCGCAGAGAGGGGTTATTTTTCCTGACTGAACTGGCGGTTAAGGTTTCGCGTACCCggggg                                                           >  2:797810/1‑137 (MQ=255)
                                                                                gTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTT‑TTCCATGAGAAGTGAGCGCAGAGAGGGGTTATCTTGCCTGACTGAACTGGCGGTTAAGTTTTCGCGTACCCGGCGt                                                           >  2:1383220/1‑140 (MQ=255)
                                                                                gTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTT‑TGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGt                                                           >  1:635758/1‑140 (MQ=255)
                                                                                gTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTC‑TGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGt                                                           <  1:1523453/140‑1 (MQ=255)
                                                                                gTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGCTATTTTTTCTTTTTT‑TTCCCTTAGGAGTGAGCGCAGAGAGGGGTTATCTTTCCTGACTGAACTGGGGGTTAAGTTTTCGCGTACCCGGCgg                                                           >  2:625343/1‑139 (MQ=255)
                                                                                 tCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTTATTTTTTCTTTTTT‑TGCCATGAGAAATGAGCGCCGAGAGGGAATATATTTTCTTACTGAACTGGGGGTTAAGTTTCTCCGCGCCCCGCGtt                                                          >  2:552888/1‑140 (MQ=255)
                                                                                  cAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTT‑TTCCCTGAGAAGGGAGCGCAGAGAGGGGTTATCTTTCCTGACTGAACTGGCGATTAAGTTTTCGCGGACCCGGCGgtt                                                         >  2:1523453/1‑140 (MQ=255)
                                                                                  cAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTC‑TTCCAATAGAAGTGAGGGGCGGGAGGGAGTATTTTGCCTGACTGAACTGGGGATTAAGGTTTCCCGTACCCCGCGttt                                                         >  2:645292/1‑140 (MQ=255)
                                                                                  cAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTC‑TGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGttt                                                         <  1:1159039/140‑1 (MQ=255)
                                                                                   aGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTT‑TTCCCTGAGAAAAGAGGGCAGAGAGGGGTTATCTTTCCTTACTGAACTGGCGGTTAAGTTTTCCCGTACCCGGCGgttt                                                        >  2:767139/1‑139 (MQ=255)
                                                                                         cATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTC‑TGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTAtt                                                  <  2:929742/140‑1 (MQ=255)
                                                                                           tttCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTC‑TGCCATGAGAAGGGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGGTTAAATTTCCGCGTACCCCGCGTTTTGTtttttg                                                >  2:113111/1‑138 (MQ=255)
                                                                                            ttCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTC‑TGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCg                                               <  1:900963/140‑1 (MQ=255)
                                                                                            ttCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTC‑TGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCg                                               <  1:1431645/140‑1 (MQ=255)
                                                                                              cAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTC‑TGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGga                                             <  1:326856/140‑1 (MQ=255)
                                                                                              cAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTC‑TGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGga                                             <  1:3938/140‑1 (MQ=255)
                                                                                              cAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTC‑TGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGga                                             <  1:1502144/140‑1 (MQ=255)
                                                                                              cAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTC‑TGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGga                                             <  1:1278739/140‑1 (MQ=255)
                                                                                                 gATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTC‑TGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGgatga                                          <  2:887113/140‑1 (MQ=255)
                                                                                                 gATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTC‑TGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGgatga                                          <  2:914010/140‑1 (MQ=255)
                                                                                                 acagCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTC‑TGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGgatga                                          <  1:209422/137‑1 (MQ=255)
                                                                                                   tGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTC‑TGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGgatgatg                                        <  1:1214430/140‑1 (MQ=255)
                                                                                                      cATGTCGCGGATCTCGTTTGCGGCGGTCCTTTTTTTTTTTTT‑TGCCATGAGAAGGGAGCGCAGAGAGGGGTTATCTTGCCTGACTGAACTGGGGATTAAGTTTTCGCGGACCCGGCGTTTTGTTATTTCGGATGATGgta                                     >  2:109685/1‑140 (MQ=255)
                                                                                                      cATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTT‑TTGCATGAGGAGGGAGCGGAGGGGGGGGTTTTTTTGCCTGGTTGTAGTGGGGATTAAGGTTTCGCGTACCCGGCGGTTTGTTATTGTGGGTGGTGata                                     >  2:326856/1‑140 (MQ=255)
                                                                                                      cATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTT‑TGCCATGAGAAGGGAGCGCAGAGAGGGGTTATCTTGCCTGACTGAACTGGCGATTAAGTTTTCGCGTACCCCGCGGTTAGTTATTGCGggtgatgatt                                     >  2:141954/1‑139 (MQ=255)
                                                                                                            gcgGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTC‑TGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAg                               <  1:592621/140‑1 (MQ=255)
                                                                                                             cgGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTT‑TGCCATGAGGAGTGAGCGCAGAGAGGGATTATCTTTCCTGACTGAACTGGGGATTTAGTTTTCGCGTACCCGGCGGTTAGTTTTTTCGGGTGATGATATTTAAGc                              >  2:1427825/1‑140 (MQ=255)
                                                                                                              ggATCTCGTTTGCGGCGGTCATTTTTTCTTTTTC‑TGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCt                             <  1:1015545/140‑1 (MQ=255)
                                                                                                              ggATCTCGTTTGCGGCGGTCATTTTTTCTTTTTC‑TGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCt                             <  2:1303355/140‑1 (MQ=255)
                                                                                                                aTCTCGTTTGCGGCGGTCATTTTTTTTTTTTT‑TTCCATGAGAAGTGAGCGCAGAGAGGGGTTATCTTTCCTGACTGAACTGGCGGTTAAGTTTCCGCGGACCCGGCGTTTTGTTTTTGCGGGTGATGATATTGAAGCTCg                           >  2:1483132/1‑140 (MQ=255)
                                                                                                                aTCTCGTTTGCGGCGGTCATTTTTTCTTTTTT‑TGCCCTGAGAAGTGAGGGCCGAGAGGGGTTATTTTGCCTGACTGAACTGGCGATTTAGTTTTCGCGGACCCGGCGTTTTGTTTTTTCGGGTGATGATATTTAAGCtgt                           >  2:209422/1‑138 (MQ=255)
                                                                                                                    cGTTTGCGGCGGTCATTTTTTTTTTTTT‑TTCCCTTAGAAGGGAGCGCAGAGGGGGGTTATCTTTCCTGTCTGAACTGGCGGTTAAGTTTTCGCGTACCCGGCGGTTTGTTTTTGCGGGTGATGATATTGAAGCTCGGCTg                       >  2:327682/1‑140 (MQ=255)
                                                                                                                    cGTTTGCGGCGGTCATTTTTTTTTTTTT‑TTCCCTGAGAAGGGGGCGCAGAGAGGGGTTTTTTTGCCTGACTGAACTGGCGGTTAAGTTTTCGCGTACCCGGCGGTTTGTTATTTCGGGTGATGATATTTTAGCTCGGCTg                       >  2:1318046/1‑140 (MQ=255)
                                                                                                                    cGTTTGCGGCGGTCATTTTTTTTTTTTT‑TGCCATGAGAAGTGAGGGCAGAGAGGGGTTATCTTGCCTGACTGAACTGGCGGTTAAGTTTTCGCGTACCCCGCGGTTTGTTTTTTCGGGTGATGATATTTAAGCTCGGCTg                       >  2:1241904/1‑140 (MQ=255)
                                                                                                                    cGTTTGCGGCGGTCATTTTTTCTTTTTT‑TTCCATTAGAAAGGAGGGCAGAGAGGGGGTATTTTTCCTGACTGAACTGGCGATTAAGTTTTCGCGGAACCCGCGGTTTGTTATTTCGGATGGTGGTATTTTAGGTCGGCTg                       >  2:769639/1‑140 (MQ=255)
                                                                                                                      tttGCGGCGGTCATTTTTTCTTTTTC‑TGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGAt                     <  1:1580912/140‑1 (MQ=255)
                                                                                                                       ttGCGGCGGTCATTTTTTCTTTTTC‑TGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGAtt                    <  1:10793/140‑1 (MQ=255)
                                                                                                                          cggcggTCATTTTTTCTTTTTC‑TGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGt                 <  1:1219021/140‑1 (MQ=255)
                                                                                                                             cggTCATTTTTTCTTTTTC‑TGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCa              <  2:1204897/140‑1 (MQ=255)
                                                                                                                                         ctttttc‑tGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCa  >  2:462110/1‑140 (MQ=255)
                                                                                                                                         |                                                                                                                                            
ATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTC‑TGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCA  >  NC_000913/4604207‑4604483

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑