BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	375102 =	NA (NA)	25 (0.390)	12/216	3.2	NA	noncoding (17/36 nt)	other	REP31d
*	?	NC_000913	377351 =	NA (NA)	25 (0.390)	12/216	3.2	NA	noncoding (16/37 nt)	other	REP32a
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 182 total aligned reads displayed.

GGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGC  >  NC_000913/374968‑375241

ggCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGt                                                                                                                                             >  1:1040044/1‑140 (MQ=37)

ggCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGt                                                                                                                                             <  2:1040044/140‑1 (MQ=37)

ggCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGt                                                                                                                                             <  1:43281/140‑1 (MQ=37)

 gCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTc                                                                                                                                            >  1:1064850/1‑140 (MQ=37)

 gCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTc                                                                                                                                            >  2:1328029/1‑140 (MQ=37)

 gCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTc                                                                                                                                            >  2:1205601/1‑140 (MQ=39)

 gCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTc                                                                                                                                            >  2:110113/1‑140 (MQ=37)

 gCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTc                                                                                                                                            >  1:576917/1‑140 (MQ=39)

      agaATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATc                                                                                                                                       <  2:1064850/140‑1 (MQ=34)

       gaATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGCAA‑A‑GCGTCGCATc                                                                                                                                       <  1:363904/140‑1 (MQ=11)

       cgagcatattgcctaccacgccaataaactgaatatgcgttgataataGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCa                                                                                                                                      >  2:640939‑M1/49‑140 (MQ=255)

             gTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATc                                                                                                                                >  1:408190/1‑140 (MQ=35)

                tgcctaccacgccaataaactgaatatgcgttgataataGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTgc                                                                                                                             <  2:229322‑M1/101‑1 (MQ=255)

                      aTAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGa                                                                                                                  >  1:907203/1‑140 (MQ=34)

                      aTAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGa                                                                                                                  >  1:1019986/1‑140 (MQ=34)

                      aTAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGa                                                                                                                  <  1:110113/140‑1 (MQ=34)

                            cgcgTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCg                                                                                                            >  1:766184/1‑140 (MQ=34)

                                ttAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATg                                                                                                        >  2:787317/1‑140 (MQ=34)

                                  aGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGCAA‑A‑GCGTCGCATCAGGCAT‑GGC‑‑‑‑‑GCACGACTGCCGGATgcg                                                                                                      <  1:203672/140‑1 (MQ=11)

                                  aGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCa                                                                                                                     <  2:428328/125‑1 (MQ=35)

                                      tCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGt                                                                                                  >  1:1095650/1‑140 (MQ=34)

                                       cGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTg                                                                                                 <  2:466203/140‑1 (MQ=35)

                                       cGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTg                                                                                                 <  2:389292/140‑1 (MQ=35)

                                        tatgcgttgataataGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGa                                                                                                >  1:229322‑M1/16‑140 (MQ=255)

                                        gCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGa                                                                                                >  2:538337/1‑140 (MQ=37)

                                            cAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGc                                                                                            <  2:408190/140‑1 (MQ=38)

                                             gttgataataGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑CA‑AAGCGTCGCATCAGGCATCTGCATGGCGCACGACTGCCGGATGCGGCGTg                                                                                                 <  2:540070‑M1/130‑1 (MQ=255)

                                             aGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGcc                                                                                           >  1:623341/1‑140 (MQ=37)

                                                   cTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATcc                                                                                     >  1:1172216/1‑140 (MQ=37)

                                                    tGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACACA‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCg                                                                                    >  1:496190/1‑140 (MQ=255)

                                                      cgcACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGc                                                                                  >  2:506422/1‑140 (MQ=37)

                                                         ACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGTCTa                                                                               <  2:703603‑M1/140‑1 (MQ=255)

                                                         ACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTa                                                                               <  2:1076918‑M1/140‑1 (MQ=255)

                                                          CGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAc                                                                              <  2:992929‑M1/140‑1 (MQ=255)

                                                          CGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAc                                                                              <  2:126895‑M1/140‑1 (MQ=255)

                                                          CGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAc                                                                              <  1:993746‑M1/140‑1 (MQ=255)

                                                          CGACTGCCGGATGCGGCATGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAc                                                                              <  2:185594‑M1/140‑1 (MQ=255)

                                                                CCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCggtctacacttcg                                                                        >  1:390068‑M1/1‑134 (MQ=255)

                                                                 CGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCcggtctacacttcgc                                                                       >  1:703603‑M1/1‑133 (MQ=255)

                                                                  GGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGgcg                                                                      >  2:965541‑M1/1‑140 (MQ=255)

                                                                  GGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGgcg                                                                      >  1:535107‑M1/1‑140 (MQ=255)

                                                                  GGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGgcg                                                                      >  2:1095650‑M1/1‑140 (MQ=255)

                                                                  GGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGgcg                                                                      >  2:647771‑M1/1‑140 (MQ=255)

                                                                  GGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGgcg                                                                      >  1:126895‑M1/1‑140 (MQ=255)

                                                                       CGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCgaga                                                                 >  1:1330587‑M1/1‑140 (MQ=255)

                                                                       CGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCgaga                                                                 >  2:1324706‑M1/1‑140 (MQ=255)

                                                                       CGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCgaga                                                                 >  2:1338257‑M1/1‑140 (MQ=255)

                                                                       CGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCgaga                                                                 >  1:965767‑M1/1‑140 (MQ=255)

                                                                        GGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑CA‑AAGCGTCGCATCAGGCATCTGCATGGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGgcg                                                                      >  1:540070‑M1/1‑140 (MQ=255)

                                                                          CGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAAtt                                                              <  2:36473‑M1/140‑1 (MQ=255)

                                                                            TGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTg                                                            >  2:1057706‑M1/1‑140 (MQ=255)

                                                                             GAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGt                                                           >  1:1076918‑M1/1‑140 (MQ=255)

                                                                                     TATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGa                                                   >  2:530038‑M1/1‑140 (MQ=255)

                                                                                        CCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATaa                                                >  2:1396496‑M1/1‑140 (MQ=255)

                                                                                        CCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATaa                                                >  2:900595‑M1/1‑140 (MQ=255)

                                                                                          GGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGa                                              >  2:831367‑M1/1‑140 (MQ=255)

                                                                                           GCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGAc                                             <  1:208319‑M1/140‑1 (MQ=255)

                                                                                                    tGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCg                                    <  1:842801/140‑1 (MQ=40)

                                                                                                      gcgcGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTc                                  <  1:52410/140‑1 (MQ=40)

                                                                                                          gggAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATaa                                                <  2:280857/122‑1 (MQ=255)

                                                                                                           gtaagccgTAGGCCTGATAAGACGCGCAA‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCAt                              >  2:487012/8‑140 (MQ=11)

                                                                                                           gtaagccgTAGGCCTGATAAGACGCGCAA‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCAt                              >  1:371627/8‑140 (MQ=11)

                                                                                                           gtaagccgTAGGCCTGATAAGACGCGCAA‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCAt                              >  1:246065/8‑140 (MQ=11)

                                                                                                           gtaagccgTAGGCCTGATAAGACGCGCAA‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCAt                              >  1:144082/8‑140 (MQ=11)

                                                                                                           gtaagccgTAGGCCTGATAAGACGCGCAA‑A‑GCGTCGCATCAGGCAT‑GGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATc                             >  1:617921/8‑140 (MQ=11)

                                                                                                           gtaagccgTAGGCCTGATAAGACGCGCAA‑A‑GCGTCGCATCAGGCAT‑GGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATc                             >  1:661343/8‑140 (MQ=11)

                                                                                                           gtaagccgTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATc                             >  1:421490/8‑140 (MQ=255)

                                                                                                           gtaagccgTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATc                             >  1:88551/8‑140 (MQ=255)

                                                                                                           gtaagccgTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATc                             >  1:318463/8‑140 (MQ=255)

                                                                                                           gtaagccgTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATc                             >  2:568846/8‑140 (MQ=255)

                                                                                                           gtaagccgTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATc                             >  1:825214/8‑140 (MQ=255)

                                                                                                           gtaagccgTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATc                             >  1:822556/8‑140 (MQ=255)

                                                                                                           gtaagccgTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATc                             >  1:1350576/8‑140 (MQ=255)

                                                                                                           gtaagccgTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATc                             >  1:964765/8‑140 (MQ=255)

                                                                                                           gtaagccgTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATc                             >  1:384350/8‑140 (MQ=255)

                                                                                                           gtaagccgTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATc                             >  1:460006/8‑140 (MQ=255)

                                                                                                           gtaagccgTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATc                             >  1:812959/8‑140 (MQ=255)

                                                                                                           gtaagccgTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATc                             >  1:1231100/8‑140 (MQ=255)

                                                                                                           gtaagccgTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATc                             >  2:802435/8‑140 (MQ=255)

                                                                                                           gtaagccgTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATc                             >  1:710338/8‑140 (MQ=255)

                                                                                                           gtaagccgTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATc                             >  1:1303526/8‑140 (MQ=255)

                                                                                                           gtaagccgTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATc                             >  1:118628/8‑140 (MQ=255)

                                                                                                           gtaagccgTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATc                             >  1:290964/8‑140 (MQ=255)

                                                                                                           gtaagccgTAGGCCTGATAAGACGCG‑CAAA‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCAt                              >  1:127945/8‑140 (MQ=11)

                                                                                                           ggAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATc                             >  2:842801/1‑140 (MQ=38)

                                                                                                           ataaaccgTAGGCCTGATAAGACGCGCAT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCAt                              >  1:276424/8‑140 (MQ=11)

                                                                                                           ataaaccgTAGGCCTGATAAGACGCGCAT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCAt                              >  1:334390/8‑140 (MQ=11)

                                                                                                           ataaaccgTAGGCCTGATAAGACGCGCAT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCAt                              >  1:1199467/8‑140 (MQ=11)

                                                                                                                 cgTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCAt                       <  1:939748/139‑1 (MQ=37)

                                                                                                                    aGGCCTGATAAGACGCGCAA‑A‑GCGTCGCATCAGGCAT‑GGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTg                    <  2:617921/140‑1 (MQ=11)

                                                                                                                    aGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTg                    <  2:710338/140‑1 (MQ=37)

                                                                                                                     ggCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTgc                   <  2:751291/140‑1 (MQ=37)

                                                                                                                     ggCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTgc                   <  2:290964/140‑1 (MQ=37)

                                                                                                                     ggCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTgc                   >  2:92502/1‑140 (MQ=37)

                                                                                                                     ggCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTgc                   <  2:1185148/140‑1 (MQ=37)

                                                                                                                        cTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCa                >  1:389569/1‑140 (MQ=34)

                                                                                                                               gACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGc         <  2:1172216/140‑1 (MQ=34)

                                                                                                                                 cgcg‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCg       >  2:434666/1‑140 (MQ=34)

                                                                                                                                    g‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGAt    >  1:816160/1‑140 (MQ=34)

                                                                                                                                       t‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATgc  <  2:1290073/140‑1 (MQ=34)

GGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TT‑A‑GCGTCGCATCAGGCATCTGC‑‑‑‑‑GCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGC  >  NC_000913/374968‑375241

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.