| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1394208 | 32 (0.210) | 120 (0.770) | 68/270 | 0.7 | 79.0% | coding (982/1614 nt) | mppA | murein tripeptide ABC transporter periplasmic binding protein |
| ? | NC_000913 | 1396044 = | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
Only 100 of 156 total aligned reads displayed.
GGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGGGACGGGCGAAAAGCCAGCGTGGCATTTTACACCAGATGTTACCGCGGGATTTACGCCGGAACCTTCGCCGTTTGAACAAATGAGTCAGGAAGAACTGAATGCGCAGGCAAAAACTTTGTTGAGCGCAGCTGGT > NC_000913/1394071‑1394342 | ggCAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGgg > 1:1277796‑M1/1‑138 (MQ=255) gCAGGTTTATACGCCGCCGCAGCTCGGGTCCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGgga > 2:2486669‑M1/1‑137 (MQ=255) cAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaa > 1:2105366‑M1/1‑136 (MQ=255) gTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggt > 2:1036216‑M1/1‑133 (MQ=255) ttATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgc < 1:197984‑M1/140‑10 (MQ=255) ccgccgcAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaag > 2:1617133‑M1/1‑124 (MQ=255) cgccgcAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagt > 1:91115‑M1/1‑123 (MQ=255) cgccgcAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagt > 1:1760856‑M1/1‑123 (MQ=255) cgccgcAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagt > 2:2172530‑M1/1‑123 (MQ=255) cgccgcAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtg < 1:1018718‑M1/131‑9 (MQ=255) cgccgcAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGGGACGGGCGAAAAGCCa > 2:2310921/1‑140 (MQ=255) gccgcAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtc < 1:2172530‑M1/140‑19 (MQ=255) ccgcAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtcc < 2:2006259‑M1/140‑20 (MQ=255) ccgcAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtcc < 1:858584‑M1/140‑20 (MQ=255) ccgcAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtcc < 2:2060931‑M1/140‑20 (MQ=255) ccgcAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtcc < 1:1117504‑M1/140‑20 (MQ=255) ccgcAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtcc < 2:642346‑M1/140‑20 (MQ=255) cgcAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccc < 2:2020342‑M1/140‑21 (MQ=255) cgcAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccc < 2:1117125‑M1/140‑21 (MQ=255) cgcAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccc < 2:189070‑M1/140‑21 (MQ=255) cgcAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGGGACGGGCGAAAAGCCAGCg < 1:2310921/140‑1 (MQ=255) tCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatat < 1:838674‑M1/140‑27 (MQ=255) tCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatat < 1:1691775‑M1/140‑27 (MQ=255) ggACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgag < 1:1436338‑M1/140‑30 (MQ=255) ggACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGACAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgag < 2:1024578‑M1/140‑30 (MQ=255) aCCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagat < 2:1172850‑M1/140‑32 (MQ=255) aCCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagat < 1:2486669‑M1/140‑32 (MQ=255) attattatGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctg < 2:261020‑M1/127‑23 (MQ=255) attattatGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctg > 1:261020‑M1/1‑105 (MQ=255) attatGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgttt < 2:933947‑M1/140‑39 (MQ=255) atGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGGGACGGGCGAAAAGCCAGCGTGGCATTTTACACCAGATGtt > 1:1184614/1‑140 (MQ=255) tGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtca > 1:354710‑M1/1‑98 (MQ=255) tGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgat < 1:64169‑M1/122‑25 (MQ=255) tGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgat > 2:64169‑M1/1‑98 (MQ=255) cGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatc > 2:221027‑M1/1‑96 (MQ=255) cGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatc > 2:856521‑M1/1‑96 (MQ=255) cGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGGGACGGGCGAAAAGCCAGCGTGGCATTTTACACCAGATGTTAcc > 1:1886013/1‑140 (MQ=255) tttAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctg > 2:1550725‑M1/1‑94 (MQ=255) tttAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctg > 2:1693630‑M1/1‑94 (MQ=255) tttAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctg > 2:94862‑M1/1‑94 (MQ=255) tttAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcat > 2:1820986‑M1/1‑94 (MQ=255) ttAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgg < 2:1760856‑M1/140‑48 (MQ=255) ttAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgg < 1:1026432‑M1/140‑48 (MQ=255) ttAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgg < 1:1550725‑M1/140‑48 (MQ=255) ttAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgg < 1:1693630‑M1/140‑48 (MQ=255) aaCACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggag > 2:1590145‑M1/1‑91 (MQ=255) aaCACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggag < 1:1248335‑M1/140‑50 (MQ=255) aaCACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgg < 2:1189852‑M1/138‑48 (MQ=255) aaCACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgg > 1:1189852‑M1/1‑91 (MQ=255) acGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcca < 2:354710‑M1/140‑53 (MQ=255) aaaaaGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccataga > 2:192943‑M1/1‑84 (MQ=255) aaGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaaca < 1:192943‑M1/140‑60 (MQ=255) aaGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGGGACGGGCGAAAAGCCAGCGTGGCATTTTACACCAGATGTTACCGCGGGATTTACGCCg < 1:434864/140‑1 (MQ=255) aGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacag < 1:94862‑M1/140‑61 (MQ=255) ggCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTGGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg < 1:1060466‑M1/140‑63 (MQ=255) ggCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg < 2:1277796‑M1/140‑63 (MQ=255) ggCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg < 1:1560184‑M1/140‑63 (MQ=255) gACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttca > 2:1708837‑M1/1‑74 (MQ=255) gACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGGGACGGGCGAAAAGCCAGCGTGGCATTTTACACCAGATGTTACCGCGGGATTTACGCCGGAACCtt > 1:982801/1‑140 (MQ=255) aCGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGGGACGGGCGAAAAGCCAGCGTGGCATTTTACACCAGATGTTACCGCGGGATTTACGCCGGAACCTTc < 2:2598504/140‑1 (MQ=255) aGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGGGACGGGCGAAAAGCCAGCGTGGCATTTTACACCAGATGTTACCGCGGGATTTACGCCGGAACCTTCGCCGt < 2:982801/140‑1 (MQ=255) aGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGGGACGGGCGAAAAGCCAGCGTGGCATTTTACACCAGATGTTACCGCGGGATTTACGCCGGAACCTTCGCCGt < 1:1614962/140‑1 (MQ=255) aGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGGGACGGGCGAAAAGCCAGCGTGGCATTTTACACCAGATGTTACCGCGGGATTTACGCCGGAACCTTCGCCGt < 2:1122553/140‑1 (MQ=255) aTCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGGGACGGGCGAAAAGCCAGCGTGGCATTTTACACCAGATGTTACCGCGGGATTTACGCCGGAACCTTCGCCGt > 1:993752/1‑138 (MQ=255) tCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgacctagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtc < 2:2105366‑M1/140‑76 (MQ=255) cgcgTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGGGACGGGCGAAAAGCCAGCGTGGCATTTTACACCAGATGTTACCGCGGGATTTACGCCGGAACCTTCGCCGTTTGAACa > 1:1502929/1‑140 (MQ=255) cgTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggt > 2:1962489‑M1/1‑59 (MQ=255) cgTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggt < 1:1962489‑M1/122‑64 (MQ=255) tCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactta > 1:1749101‑M1/1‑56 (MQ=255) tCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactta > 2:2144509‑M1/1‑56 (MQ=255) tCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactta > 2:1287837‑M1/1‑56 (MQ=255) ggCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGGGACGGGCGAAAAGCCAGCGTGGCATTTTACACCAGATGTTACCGCGGGATTTACGCCGGAACCTTCGCCGTTTGAACAAATGAGTCAgg < 1:2440608/140‑1 (MQ=255) tGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaa < 2:1038022‑M1/140‑102 (MQ=255) gACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaat < 2:1749101‑M1/140‑103 (MQ=255) gACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaat < 1:170796‑M1/140‑103 (MQ=255) gACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaat > 1:462892‑M1/1‑38 (MQ=255) gACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca < 2:763107‑M1/134‑97 (MQ=255) gACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca > 1:763107‑M1/1‑38 (MQ=255) aCGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaatt < 2:225314‑M1/140‑104 (MQ=255) tAGATCGCCGCCTGATGACCGAAAAAGTATTAGGGACGGGCGAAAAGCCAGCGTGGCATTTTACACCAGATGTTACCGCGGGATTTACGCCGGAACCTTCGCCGTTTGAACAAATGAGTCAGGAAGAACTGAATGCGCAg > 2:337771/1‑140 (MQ=255) gATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagt > 1:40643‑M1/1‑31 (MQ=255) gATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccg > 2:725412‑M1/1‑31 (MQ=255) gATCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccg < 1:725412‑M1/124‑94 (MQ=255) aTCGCCGCCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagt > 2:2272142‑M1/1‑30 (MQ=255) cgccgcCTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaa > 2:1620377‑M1/1‑28 (MQ=255) ccgccTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagc > 1:1313677‑M1/1‑26 (MQ=255) ccgccTGATGACCGAAAAAGTATTAGGGACGGGCGAAAAGCCAGCGTGGCATTTTACACCAGATGTTACCGCGGGATTTACGCCGGAACCTTCGCCGTTTGAACAAATGAGTCAGGAAGAACTGAATGCGCAGGCaa < 1:2241694/137‑1 (MQ=255) cgccTGATGACCGAAAAAGTATTATggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcg > 1:2346332‑M1/1‑25 (MQ=255) ccTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgcc > 2:1592348‑M1/1‑23 (MQ=255) ccTGATGACCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgcc > 1:2233012‑M1/1‑23 (MQ=255) atgaCCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcag < 1:2153896‑M1/128‑110 (MQ=255) aCCGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagac < 2:2233012‑M1/140‑125 (MQ=255) cGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgt < 2:864495‑M1/133‑120 (MQ=255) cGAAAAAGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgt > 1:864495‑M1/1‑14 (MQ=255) aaaaaGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaag > 2:697461‑M1/1‑12 (MQ=255) aaaaaGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaag < 1:697461‑M1/125‑114 (MQ=255) aaaaaGTATTAGggaaggcgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagagccgtcagaccaga > 2:2449567‑M1/1‑12 (MQ=255) aaaaaGTATTAGGGACGGGCGAAAAGCCAGCGTGGCATTTTACACCAGATGTTACCGCGGGATTTACGCCGGAACCTTCGCCGTTTGAACAAATGAGTCAGGAAGAACTGAATGCGCAGGCAAAAACTTTGTTGAGCGCa < 1:1635419/140‑1 (MQ=255) aaaaaGTATTAGGGACGGGCGAAAAGCCAGCGTGGCATTTTACACCAGATGTTACCGCGGGATTTACGCCGGAACCTTCGCCGTTTGAACAAATGAGTCAGGAAGAACTGAATGCGCAGGCAAAAACTTTGTTGAGCGCa < 2:1886013/140‑1 (MQ=255) tATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagag > 2:2236840‑M1/1‑6 (MQ=255) | GGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGGGACGGGCGAAAAGCCAGCGTGGCATTTTACACCAGATGTTACCGCGGGATTTACGCCGGAACCTTCGCCGTTTGAACAAATGAGTCAGGAAGAACTGAATGCGCAGGCAAAAACTTTGTTGAGCGCAGCTGGT > NC_000913/1394071‑1394342 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |